mRNA_P-wetherbeei_contig550.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig550.4.1
Unique NamemRNA_P-wetherbeei_contig550.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig550.4.1 vs. uniprot
Match: A0A836CCA2_9STRA (Anamorsin homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCA2_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.130e-25
Identity = 67/152 (44.08%), Postives = 80/152 (52.63%), Query Frame = 1
Query:   34 KPDWDVGAAAPLRPPHAAPAAALXXXXXXXXXXXXXXXXXXXXXXXXDDLLAADEGITFVPAASTV---------TAAADGGGCATKRRACKDCSCGRAEREAVAGPEGPAEEEEDAP-KSACGNCFRGDAFRCSTCPFLGKPAFEKGKEKV 459
            KP W+ GA+A L+    A   A+                        DD   +D G+    A   V         T AAD G C+TK+RACK+CSCGRAE EA   P  P E   D P  SACGNC+RGDAFRCS CP+LG PAF+KG+EKV
Sbjct:  119 KPAWEAGASAQLKFKPKAGNGAVSKPQQQQKAAVATAWKVALNDLAEDDFAESDGGLVDEDALLEVAGDVPLKRATPAADAGDCSTKKRACKNCSCGRAELEAAGAPAPPPE---DGPGSSACGNCYRGDAFRCSGCPYLGLPAFDKGQEKV 267          
BLAST of mRNA_P-wetherbeei_contig550.4.1 vs. uniprot
Match: A0A7S4GK76_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GK76_9EUGL)

HSP 1 Score: 91.3 bits (225), Expect = 1.090e-20
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 1
Query:  241 ADGGGCATKRRACKDCSCGRAEREAVAGPEGPAEEEEDAPKSACGNCFRGDAFRCSTCPFLGKPAFEKGKEKV 459
            A GGGCAT+++ACKDCSCGRAE EA    +G   + ED P   CG+C +GDAFRC+TCPFLGKPA++ G EKV
Sbjct:   62 ASGGGCATRKKACKDCSCGRAELEA----KGIDIQPEDMPAGGCGSCAKGDAFRCATCPFLGKPAWKPG-EKV 129          
BLAST of mRNA_P-wetherbeei_contig550.4.1 vs. uniprot
Match: D7FUN0_ECTSI (Anamorsin homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN0_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 1.370e-20
Identity = 50/83 (60.24%), Postives = 54/83 (65.06%), Query Frame = 1
Query:  247 GGGCATKRRACKDCSCGRAEREAVAG------------PEGPAEEEEDAPKSACGNCFRGDAFRCSTCPFLGKPAFEKGKEKV 459
            G GCATKRRACKDCSCGRAE E   G            P     + +DA  SACGNC +GDAFRC  CPFLGKPAFEKG+EK 
Sbjct:  219 GDGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGDVDDALTSACGNCSKGDAFRCGGCPFLGKPAFEKGQEKT 301          
BLAST of mRNA_P-wetherbeei_contig550.4.1 vs. uniprot
Match: W7TKP2_9STRA (Anamorsin homolog n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKP2_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.870e-20
Identity = 65/162 (40.12%), Postives = 80/162 (49.38%), Query Frame = 1
Query:   22 LTGRKPDWDVGAAAPLRPPHAAPA------------AALXXXXXXXXXXXXXXXXXXXXXXXXDDLLAADEGITFVPAASTVTAAADGGGCATKRRACKDCSCGRAERE----AVAGPEGPAEEEEDAPKSACGNCFRGDAFRCSTCPFLGKPAFEKGKEKV 459
            L   KP W+VGAAA +  P + P             +A                         D LL   E       A+       G GC TK+RACK+CSCGRAE+E     VA P   +EEE +A  S+CGNC++GDAFRC  CPFLGKPAFE G+EK+
Sbjct:  130 LIAHKPQWEVGAAASVSLPVSLPXXXXXXXXXXTGQSAATWRLTDVDGEGGEEGGAEGELIDPDSLLEDAE--VMAGLAAKRAEREQGQGCETKKRACKNCSCGRAEQEEGRGGVALPV-MSEEELEASVSSCGNCYKGDAFRCGGCPFLGKPAFEPGQEKL 288          
BLAST of mRNA_P-wetherbeei_contig550.4.1 vs. uniprot
Match: A0A7S2V0U0_9STRA (Anamorsin homolog n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0U0_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 5.810e-20
Identity = 65/155 (41.94%), Postives = 86/155 (55.48%), Query Frame = 1
Query:   19 YLTGRKPDWDVGAAAPLRPPHAAPAAALXXXXXXXXXXXXXXXXXXXXXXXXDDLLAADEGITFVPAASTVTAAADGGGC----ATK-RRACKDCSCGRAEREAVAGPEG---PAEEEEDAPKSACGNCFRGDAFRCSTCPFLGKPAFEKGKEKV 459
            +  G KPDW+VGA+A          A      XXXXX               DDL+  D+ +   P  + ++    GGGC    +TK +RACK+C+CG AE  A  G EG   PA  +  A  SACGNCF+GDAFRC++CPF GKP+F+ G+EK+
Sbjct:  107 FYEGAKPDWEVGASA----------AVSVNLGXXXXXTSASTWKIAALNEDGDDLVDEDDLLDAAPLPANIST---GGGCGDEGSTKPKRACKNCTCGLAEELAGGGGEGAAPPAPVDPVAKSSACGNCFKGDAFRCASCPFRGKPSFKPGEEKL 248          
BLAST of mRNA_P-wetherbeei_contig550.4.1 vs. uniprot
Match: A0A7S1HXN5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HXN5_9EUGL)

HSP 1 Score: 87.0 bits (214), Expect = 5.140e-19
Identity = 48/93 (51.61%), Postives = 62/93 (66.67%), Query Frame = 1
Query:  175 DDLLAADEGITFVPAASTVTAAADGGGCATKRRACKDCSCGRAEREAVAGPEGPAEEEEDAPKSACGNCFRGDAFRCSTCPFLGKPAFEKGKE 453
            DDLL  ++      AA T  A   GG CAT+++ACK+CSCGRAE EA     G   + ED P   CG+C +GDAFRC+TCPFLGKPA++ G++
Sbjct:   49 DDLLTEED-----KAAKTKEA---GGSCATRKKACKNCSCGRAELEAA----GKEIKPEDMPAGGCGSCPKGDAFRCATCPFLGKPAWKPGQK 129          
BLAST of mRNA_P-wetherbeei_contig550.4.1 vs. uniprot
Match: UPI001884F0F9 (anamorsin homolog n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884F0F9)

HSP 1 Score: 89.7 bits (221), Expect = 6.930e-19
Identity = 60/146 (41.10%), Postives = 84/146 (57.53%), Query Frame = 1
Query:   16 GYLTGRKPDWDVGAAAPLRPPHAAPAAALXXXXXXXXXXXXXXXXXXXXXXXXDDLLAADEGITFVPAASTVTAAADGGGCATKRRACKDCSCGRAEREAVAGPEGPAEEEEDAPKSACGNCFRGDAFRCSTCPFLGKPAFEKGKE 453
            GY+T RKPD++VG++APL+ P AAP+AA                         D+LL  ++     PA+  V       G   KR+ACKDCSCG AE E  AG + PA +   +  S+CG+C+ GDAFRC++CP+LG PAF+ G++
Sbjct:  121 GYVTARKPDFEVGSSAPLKLPVAAPSAAAAAVWTLSGQDALDDDLDLVDE---DELLDEEDRQRPDPASLRVC------GTTGKRKACKDCSCGLAE-ELSAGKQ-PATK---SVTSSCGSCYLGDAFRCASCPYLGMPAFKPGEK 252          
BLAST of mRNA_P-wetherbeei_contig550.4.1 vs. uniprot
Match: DRE21_TRYCC (Anamorsin homolog 1 n=8 Tax=Trypanosoma TaxID=5690 RepID=DRE21_TRYCC)

HSP 1 Score: 84.7 bits (208), Expect = 2.170e-18
Identity = 46/94 (48.94%), Postives = 54/94 (57.45%), Query Frame = 1
Query:  187 AADEGITFVPAASTVTAAADGGGCATKRRACKDCSCGRAEREAVAGPEGPAEEEEDAPKSACGNCFRGDAFRCSTCPFLGKPAFEK---GKEKV 459
            A DE          V  A  G  C T+RRACK+C+CGRAE E     EG   E    P   CGNC +GDAFRC+TCPFLG+PAF+    GK K+
Sbjct:   16 AVDEDALLTEEDRVVKEATKGEDCTTRRRACKNCTCGRAELERKMLAEGKKVEMPQMPAGGCGNCAKGDAFRCATCPFLGQPAFDNTSDGKVKL 109          
BLAST of mRNA_P-wetherbeei_contig550.4.1 vs. uniprot
Match: A0A834HQF8_RHYFE (Anamorsin homolog n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834HQF8_RHYFE)

HSP 1 Score: 86.7 bits (213), Expect = 7.500e-18
Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = 1
Query:  265 KRRACKDCSCGRAEREAVAGPEGPAEEEEDAPKSACGNCFRGDAFRCSTCPFLGKPAFEKGKE 453
            KR+ACKDCSCG AE  AV    G   + +DAPKS+CGNC+ GDAFRC++CP+LG PAF+ G++
Sbjct:  172 KRKACKDCSCGLAEELAVEAQSGKVVDTKDAPKSSCGNCYLGDAFRCASCPYLGMPAFKPGEK 234          
BLAST of mRNA_P-wetherbeei_contig550.4.1 vs. uniprot
Match: A0A7S3VIG5_DUNTE (Anamorsin homolog n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VIG5_DUNTE)

HSP 1 Score: 86.7 bits (213), Expect = 1.100e-17
Identity = 56/143 (39.16%), Postives = 77/143 (53.85%), Query Frame = 1
Query:   31 RKPDWDVGAAAPL--RPPHAAPAAALXXXXXXXXXXXXXXXXXXXXXXXXDDLLAADEGITFVPAASTVTAAADGGGCATKRRACKDCSCGRAEREAVAGPEGPAEEEEDAPKSACGNCFRGDAFRCSTCPFLGKPAFEKGKE 453
            R+PD+++GA APL  + P   PA A                         D++L  +E +T    A     AA  G C+T R+ACK+CSCGRAE+EA        +E  D P+S+CG+C  GDAFRC+ CP+ G P FE+GK+
Sbjct:  129 RRPDYEIGAKAPLSLKRPGKTPAPAAPVSSTWQLNNED------------DEMLDDEELLTEEDKARPEVPAA--GDCSTSRKACKNCSCGRAEKEAAGERVKLTQEMLDNPQSSCGSCSLGDAFRCAGCPYRGLPPFEQGKK 257          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig550.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CCA2_9STRA1.130e-2544.08Anamorsin homolog n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S4GK76_9EUGL1.090e-2063.01Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
D7FUN0_ECTSI1.370e-2060.24Anamorsin homolog n=1 Tax=Ectocarpus siliculosus T... [more]
W7TKP2_9STRA3.870e-2040.12Anamorsin homolog n=3 Tax=Monodopsidaceae TaxID=42... [more]
A0A7S2V0U0_9STRA5.810e-2041.94Anamorsin homolog n=2 Tax=Fibrocapsa japonica TaxI... [more]
A0A7S1HXN5_9EUGL5.140e-1951.61Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
UPI001884F0F96.930e-1941.10anamorsin homolog n=1 Tax=Pollicipes pollicipes Ta... [more]
DRE21_TRYCC2.170e-1848.94Anamorsin homolog 1 n=8 Tax=Trypanosoma TaxID=5690... [more]
A0A834HQF8_RHYFE7.500e-1860.32Anamorsin homolog n=1 Tax=Rhynchophorus ferrugineu... [more]
A0A7S3VIG5_DUNTE1.100e-1739.16Anamorsin homolog n=1 Tax=Dunaliella tertiolecta T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig550contigP-wetherbeei_contig550:8596..9244 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FUN0
Preferred nameDRE2
PFAMsCIAPIN1,DRE2_N,Methyltransf_11
Model size459
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001505,GO:0002064,GO:0002065,GO:0002066,GO:0002376,GO:0002520,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005829,GO:0006091,GO:0006790,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0008150,GO:0008152,GO:0009055,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010941,GO:0016043,GO:0016226,GO:0016491,GO:0019222,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022900,GO:0030097,GO:0030154,GO:0030707,GO:0030855,GO:0031163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044572,GO:0044703,GO:0045019,GO:0045428,GO:0048037,GO:0048468,GO:0048477,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051704,GO:0055114,GO:0060429,GO:0060548,GO:0065007,GO:0065008,GO:0070013,GO:0071840,GO:0080134,GO:0080135,GO:1900407,GO:1900408,GO:1901031,GO:1901032,GO:1901298,GO:1901299,GO:1902882,GO:1902883,GO:1903201,GO:1903202,GO:1903205,GO:1903206,GO:1903426,GO:1903427,GO:1904406,GO:2000377,GO:2000378,GO:2001023,GO:2001024,GO:2001038,GO:2001039
Exons2
Evalue2.25e-21
EggNOG OGsCOG5636@1|root,KOG4020@2759|Eukaryota
Ec32 ortholog descriptionAnamorsin
Ec32 orthologEc-26_002090.1
Descriptionmetallo-sulfur cluster assembly
Cds size459
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186820.6985936-CDS-P-wetherbeei_contig550:8595..89841683186820.6985936-CDS-P-wetherbeei_contig550:8595..8984Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig550 8596..8984 -
1683186820.7162478-CDS-P-wetherbeei_contig550:9174..92441683186820.7162478-CDS-P-wetherbeei_contig550:9174..9244Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig550 9175..9244 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig550.4.1prot_P-wetherbeei_contig550.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig550 8596..9244 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig550.4.1

>prot_P-wetherbeei_contig550.4.1 ID=prot_P-wetherbeei_contig550.4.1|Name=mRNA_P-wetherbeei_contig550.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bp
MQGGEGYLTGRKPDWDVGAAAPLRPPHAAPAAALSAAASSSAWKVSADDL
AEDDLIDEDDLLAADEGITFVPAASTVTAAADGGGCATKRRACKDCSCGR
AEREAVAGPEGPAEEEEDAPKSACGNCFRGDAFRCSTCPFLGKPAFEKGK
EKV
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mRNA from alignment at P-wetherbeei_contig550:8596..9244-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig550.4.1 ID=mRNA_P-wetherbeei_contig550.4.1|Name=mRNA_P-wetherbeei_contig550.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=649bp|location=Sequence derived from alignment at P-wetherbeei_contig550:8596..9244- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGGGAGGAGAAGGCTACCTGACAGGACGAAAGCCGGATTGGGACGT CGGCGCTGCGGCGCCGCTGCGTTTCGGGAAGGGGAACGGTGCTGCCAGCG GTGTCGCGAATGGGAACGGTAAGTCCTTAACATTTCAGATAGATTTTGCG CTGCAGTCGTTACTTTCCTTTGAAGCGACGTGCCAACACCTTTCATTGGC CCTTTCCCGTTTAAAAACGTCTCTTGCCCCACATTCTTTTGTATTGAACG GCACACGAAGGTCCTCCGCATGCTGCTCCGGCGGCGGCGCTGTCGGCGGC TGCGTCCTCTTCAGCGTGGAAGGTGTCGGCCGACGACCTCGCCGAGGACG ACCTGATCGACGAAGACGACCTCCTGGCCGCCGACGAAGGCATCACCTTT GTCCCGGCGGCTTCGACTGTTACAGCAGCCGCTGACGGCGGCGGCTGCGC CACAAAGCGCCGGGCCTGCAAGGACTGCTCGTGCGGACGCGCCGAGCGGG AAGCTGTGGCGGGGCCGGAAGGGCCGGCAGAGGAAGAGGAAGACGCGCCC AAGTCGGCGTGCGGCAACTGCTTCCGCGGGGACGCCTTCCGCTGCAGCAC GTGCCCGTTCCTGGGGAAGCCGGCCTTTGAAAAGGGCAAAGAGAAGGTA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig550:8596..9244-

>mRNA_P-wetherbeei_contig550.4.1 ID=mRNA_P-wetherbeei_contig550.4.1|Name=mRNA_P-wetherbeei_contig550.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=459bp|location=Sequence derived from alignment at P-wetherbeei_contig550:8596..9244- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGGGAGGAGAAGGCTACCTGACAGGACGAAAGCCGGATTGGGACGT
CGGCGCTGCGGCGCCGCTGCGTCCTCCGCATGCTGCTCCGGCGGCGGCGC
TGTCGGCGGCTGCGTCCTCTTCAGCGTGGAAGGTGTCGGCCGACGACCTC
GCCGAGGACGACCTGATCGACGAAGACGACCTCCTGGCCGCCGACGAAGG
CATCACCTTTGTCCCGGCGGCTTCGACTGTTACAGCAGCCGCTGACGGCG
GCGGCTGCGCCACAAAGCGCCGGGCCTGCAAGGACTGCTCGTGCGGACGC
GCCGAGCGGGAAGCTGTGGCGGGGCCGGAAGGGCCGGCAGAGGAAGAGGA
AGACGCGCCCAAGTCGGCGTGCGGCAACTGCTTCCGCGGGGACGCCTTCC
GCTGCAGCACGTGCCCGTTCCTGGGGAAGCCGGCCTTTGAAAAGGGCAAA
GAGAAGGTA
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