mRNA_P-wetherbeei_contig5430.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5430.2.1
Unique NamemRNA_P-wetherbeei_contig5430.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5430.2.1 vs. uniprot
Match: A0A353LUA1_9PROT (Cyclopentanol dehydrogenase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LUA1_9PROT)

HSP 1 Score: 378 bits (971), Expect = 1.030e-130
Identity = 193/251 (76.89%), Postives = 221/251 (88.05%), Query Frame = 1
Query:    1 MAGRVEGKIAFVTGGGSGMGREHALLMAEEGASIIVSDVNEAGGRETVSMINSKGGQGLFINFDVASEAAWQSAVNQAVSTFGRVDILVNNAGIFMMKMMADTTGEELDRMLNINVKGVFYGCKHILPAMQKAGGGSIINISSIYGVIGAPAASAYQASKGAVRILTKSVAVEYAPYNIRANSIHPGVIRTPMTKDLMATPDSEKAILASTILRRAAEPREVAYPVLFLASSESSYITGAEIMVDGGYTTV 753
            MAGRVEGKIAFVTGGG+GMG+EHALLMAEEGA++IVSDVNE  GR+TV  IN KGGQ LFI FDVASEA WQ AV QAV+TFGRVDILVNNAGI  M  +  T+ +ELDR+L++NVKGVFYGCKHILPAMQKAGGGSI+NISSIYG+IGAP A+AYQASKGAVRILTKSVAV+YAP+NIR NS+HPGVIRT MTK ++      +AILA+TILRR AEPREV+Y VLFLAS E+SY+TGAE++VDGGYTT+
Sbjct:    1 MAGRVEGKIAFVTGGGAGMGKEHALLMAEEGATLIVSDVNETEGRQTVEEINGKGGQALFIKFDVASEAEWQGAVEQAVTTFGRVDILVNNAGILAMNSVDKTSADELDRVLDVNVKGVFYGCKHILPAMQKAGGGSIVNISSIYGMIGAPVAAAYQASKGAVRILTKSVAVDYAPHNIRVNSVHPGVIRTNMTKGILENAAGTEAILATTILRRPAEPREVSYAVLFLASDEASYVTGAELVVDGGYTTM 251          
BLAST of mRNA_P-wetherbeei_contig5430.2.1 vs. uniprot
Match: A0A6N6VLQ6_9HYPH (Glucose 1-dehydrogenase n=15 Tax=Bacteria TaxID=2 RepID=A0A6N6VLQ6_9HYPH)

HSP 1 Score: 316 bits (810), Expect = 3.100e-106
Identity = 158/249 (63.45%), Postives = 200/249 (80.32%), Query Frame = 1
Query:    7 GRVEGKIAFVTGGGSGMGREHALLMAEEGASIIVSDVNEAGGRETVSMINSKGGQGLFINFDVASEAAWQSAVNQAVSTFGRVDILVNNAGIFMMKMMADTTGEELDRMLNINVKGVFYGCKHILPAMQKAGGGSIINISSIYGVIGAPAASAYQASKGAVRILTKSVAVEYAPYNIRANSIHPGVIRTPMTKDLMATPDSEKAILASTILRRAAEPREVAYPVLFLASSESSYITGAEIMVDGGYTTV 753
            GRV+GKIAFVTGG +GMGR HALL+A EGA++IV+D++E GG   V  IN  GGQ  F   DV+S + W+    +A+STFGRVDILVNNAGI +   + DT+ E+  R+L++NVK VFYG K+ILPAM+ AGGGSI+NISSIYG+IGAPA +AYQASKGAVR+LTKS AV+YAP+ IR NS+HPG+IRT MTKDL+   D  K +L++T++ R AEP EV+Y VLFLAS ESSY+TG+E++VDGGYTT+
Sbjct:    2 GRVDGKIAFVTGGANGMGRSHALLLAREGATLIVTDMDEKGGNAVVEEINDHGGQARFFKHDVSSVSDWERISQEAMSTFGRVDILVNNAGILVFSAVQDTSNEDFARVLDVNVKSVFYGTKYILPAMKAAGGGSIVNISSIYGLIGAPATAAYQASKGAVRLLTKSTAVDYAPFKIRVNSVHPGIIRTNMTKDLLGDADVAKQVLSATLIGRPAEPVEVSYAVLFLASDESSYMTGSEVVVDGGYTTM 250          
BLAST of mRNA_P-wetherbeei_contig5430.2.1 vs. uniprot
Match: A0A2E5BV84_9HYPH (Cyclopentanol dehydrogenase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2E5BV84_9HYPH)

HSP 1 Score: 313 bits (802), Expect = 5.100e-105
Identity = 156/249 (62.65%), Postives = 202/249 (81.12%), Query Frame = 1
Query:    7 GRVEGKIAFVTGGGSGMGREHALLMAEEGASIIVSDVNEAGGRETVSMINSKGGQGLFINFDVASEAAWQSAVNQAVSTFGRVDILVNNAGIFMMKMMADTTGEELDRMLNINVKGVFYGCKHILPAMQKAGGGSIINISSIYGVIGAPAASAYQASKGAVRILTKSVAVEYAPYNIRANSIHPGVIRTPMTKDLMATPDSEKAILASTILRRAAEPREVAYPVLFLASSESSYITGAEIMVDGGYTTV 753
            GRV+GKIAFVTGG +GMGR HALL+A EGA+++V+D++E GG   V  IN++GGQ  FI  DVA  + W+SAV Q ++TFG VDIL+NNAGI ++  + DT  E+ DR+L+INVKGVFYG K++LPAMQ AGGGSI+NISSIY +IGAPA++AYQASKGAVR+LTKS AV+YAP+ IR NS+HP +IRT MTKD++      + I+ +T+L R AEP EV+Y VLFLAS E+SY+TG+E++VDGGYTT+
Sbjct:    2 GRVDGKIAFVTGGANGMGRCHALLLAREGATLVVTDMDEKGGHAVVDEINAEGGQARFIKLDVACPSDWKSAVEQTIATFGCVDILINNAGILVLSTVQDTLDEDFDRVLDINVKGVFYGMKYMLPAMQAAGGGSIVNISSIYVLIGAPASAAYQASKGAVRLLTKSTAVDYAPFKIRVNSVHPSIIRTNMTKDMLVDEAITQQIIGTTLLGRPAEPMEVSYAVLFLASDEASYMTGSEVVVDGGYTTM 250          
BLAST of mRNA_P-wetherbeei_contig5430.2.1 vs. uniprot
Match: A0A352Q5I8_9GAMM (Cyclopentanol dehydrogenase n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A352Q5I8_9GAMM)

HSP 1 Score: 313 bits (802), Expect = 5.280e-105
Identity = 153/249 (61.45%), Postives = 204/249 (81.93%), Query Frame = 1
Query:    1 MAGRVEGKIAFVTGGGSGMGREHALLMAEEGASIIVSDVNEAGGRETVSMINSKGGQGLFINFDVASEAAWQSAVNQAVSTFGRVDILVNNAGIFMMKMMADTTGEELDRMLNINVKGVFYGCKHILPAMQKAGGGSIINISSIYGVIGAPAASAYQASKGAVRILTKSVAVEYAPYNIRANSIHPGVIRTPMTKDLMATPDSEKAILASTILRRAAEPREVAYPVLFLASSESSYITGAEIMVDGGYT 747
            MAGRV+ K+  VTGGG GMGREHALL+AEEG  I+++D++EA G++TV  +N+ GG+ +FI  DVA+EA W++ V  AV  FG+VD+LVNNAG+  +K + +TT E+ D + +IN KG+F+G KHILPAM+KAGGGSIINISSIYG+ GAP+A+AYQASKGAVR+ TKS AVEYA +NIR NS+HPGVI T MT D++A  ++ +A+L S I+RR A+P+EV++ VLFLAS ESSY+TG+E+++DGGYT
Sbjct:    1 MAGRVQDKVCLVTGGGLGMGREHALLLAEEGGRIVLTDIDEAAGQKTVEDVNAAGGEAVFIKQDVAAEAEWKTVVATAVEHFGKVDVLVNNAGVLRLKTIQETTAEDWDFINDINTKGLFFGVKHILPAMEKAGGGSIINISSIYGIAGAPSAAAYQASKGAVRVFTKSAAVEYAAFNIRVNSVHPGVIATAMTADVIADDEATQALLGSAIIRRPAQPKEVSWGVLFLASDESSYMTGSELVIDGGYT 249          
BLAST of mRNA_P-wetherbeei_contig5430.2.1 vs. uniprot
Match: A0A1Y5FPR8_9GAMM (Cyclopentanol dehydrogenase n=1 Tax=Gammaproteobacteria bacterium 53_120_T64 TaxID=1856295 RepID=A0A1Y5FPR8_9GAMM)

HSP 1 Score: 307 bits (787), Expect = 9.710e-103
Identity = 147/247 (59.51%), Postives = 197/247 (79.76%), Query Frame = 1
Query:    7 GRVEGKIAFVTGGGSGMGREHALLMAEEGASIIVSDVNEAGGRETVSMINSKGGQGLFINFDVASEAAWQSAVNQAVSTFGRVDILVNNAGIFMMKMMADTTGEELDRMLNINVKGVFYGCKHILPAMQKAGGGSIINISSIYGVIGAPAASAYQASKGAVRILTKSVAVEYAPYNIRANSIHPGVIRTPMTKDLMATPDSEKAILASTILRRAAEPREVAYPVLFLASSESSYITGAEIMVDGGYT 747
            GRV+ K+  VTGG +GMGREH LL+AEEG  I+++D+NE  G+ T + + +KGG+ +F+  DVASE  W+  +  AV TFG++D+LVNNAG+F++K + +TT  + D + N+N KG+F+G KH+LPAM+KAGGGSIINISSIYG+ GA  ASAYQASKGAVRI TKS AVEYAPYNIR NS+HPGVI T MT ++MA  ++ +A+L   I+RR AEP+EV++ VLFLA+ ESSY+TG+E+++DGGYT
Sbjct:    2 GRVQDKVCLVTGGAAGMGREHVLLLAEEGGRIVLTDLNEEAGQATAAEVKAKGGEAIFVKHDVASEDDWKMVIKTAVDTFGQIDVLVNNAGVFVVKSIQETTAVDWDFVNNVNTKGLFFGVKHVLPAMEKAGGGSIINISSIYGIAGASNASAYQASKGAVRIFTKSAAVEYAPYNIRVNSVHPGVIATAMTAEIMADKEATEALLGGAIIRRPAEPKEVSWGVLFLATDESSYMTGSELVIDGGYT 248          
BLAST of mRNA_P-wetherbeei_contig5430.2.1 vs. uniprot
Match: A0A3B8XQJ7_9HYPH (Cyclopentanol dehydrogenase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A3B8XQJ7_9HYPH)

HSP 1 Score: 305 bits (782), Expect = 5.780e-102
Identity = 157/251 (62.55%), Postives = 196/251 (78.09%), Query Frame = 1
Query:    1 MAGRVEGKIAFVTGGGSGMGREHALLMAEEGASIIVSDVNEAGGRETVSMINSKGGQGLFINFDVASEAAWQSAVNQAVSTFGRVDILVNNAGIFMMKMMADTTGEELDRMLNINVKGVFYGCKHILPAMQKAGGGSIINISSIYGVIGAPAASAYQASKGAVRILTKSVAVEYAPYNIRANSIHPGVIRTPMTKDLMATPDSEKAILASTILRRAAEPREVAYPVLFLASSESSYITGAEIMVDGGYTTV 753
            MAGRVEGKIA VTGG +GMGR HA+L+A EGA++IV+D +E  G+  +  IN +GGQ  FI  DVAS   W     Q +STFG +DILVNNAGI +   + DT  E+  R L++NVKGVFYG K++LPA++ +G  SI+N+SSIYG+IGAP  +AYQASKGAVR+LTKS AV+YA + IR NSIHPGVIRT MTKDL+A+ D E  +L++T+L RAAEP EV+Y VLFLAS E+SYITGAEI+VDGGYTT+
Sbjct:    1 MAGRVEGKIALVTGGANGMGRSHAMLLAREGATLIVTDRDEEAGQAVIDEINRQGGQARFIVHDVASAEDWGRISEQTLSTFGHLDILVNNAGILLFSAVQDTGDEDFARTLDVNVKGVFYGTKYMLPALKASGKASIVNVSSIYGLIGAPMVAAYQASKGAVRLLTKSTAVDYAQFRIRVNSIHPGVIRTNMTKDLLASADMENRLLSTTLLGRAAEPEEVSYAVLFLASDEASYITGAEIVVDGGYTTL 251          
BLAST of mRNA_P-wetherbeei_contig5430.2.1 vs. uniprot
Match: A0A2A5DQ30_9PROT (Cyclopentanol dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2A5DQ30_9PROT)

HSP 1 Score: 301 bits (771), Expect = 2.810e-100
Identity = 151/251 (60.16%), Postives = 190/251 (75.70%), Query Frame = 1
Query:    7 GRVEGKIAFVTGGGSGMGREHALLMAEEGASIIVSDVNEAGGRETVSMINSKGGQGLFINFDVASEAAWQSAVNQAVSTFGRVDILVNNAGIFMMKMMADTTGEELDRMLNINVKGVFYGCKHILPAMQKAGGGSIINISSIYGVIGAPA--ASAYQASKGAVRILTKSVAVEYAPYNIRANSIHPGVIRTPMTKDLMATPDSEKAILASTILRRAAEPREVAYPVLFLASSESSYITGAEIMVDGGYTTV 753
            GR+EGK+A VTGG  GMG+  +LL A EGA ++V+D+ E  G+  V  I   GG+ +F+  DV  E  W++ V++A+  FG+VD+LVNNAGI ++K   DT+ EELD +LNINVKGVF GCKH+LPAMQKAGGGSIINISSIYG+IGAP   A+AYQASKGAVRILTKSVA EYAP+NIR NS+HPG I TPMT D+  +P+ + A++  TIL R   P EVA   LFLAS ++SY+ GAE +VDGGYT +
Sbjct:    2 GRIEGKVAIVTGGALGMGKATSLLFAREGAKVVVTDIKEVEGKAVVEAIKQAGGEAIFLKQDVTKENEWKAVVDKAIGEFGQVDVLVNNAGILLLKGCQDTSVEELDLVLNINVKGVFLGCKHVLPAMQKAGGGSIINISSIYGLIGAPGGVAAAYQASKGAVRILTKSVAAEYAPHNIRVNSVHPGYIETPMTSDITESPEMKLAVIGPTILGRTGRPEEVANATLFLASDDASYVNGAEFVVDGGYTAM 252          
BLAST of mRNA_P-wetherbeei_contig5430.2.1 vs. uniprot
Match: A0A1Y5EQ84_9GAMM (Cyclopentanol dehydrogenase n=1 Tax=Cycloclasticus sp. 46_120_T64 TaxID=1856281 RepID=A0A1Y5EQ84_9GAMM)

HSP 1 Score: 300 bits (767), Expect = 1.140e-99
Identity = 156/251 (62.15%), Postives = 195/251 (77.69%), Query Frame = 1
Query:    7 GRVEGKIAFVTGGGSGMGREHALLMAEEGASIIVSDVNEAGGRETVSMINSKGGQGLFINFDVASEAAWQSAVNQAVSTFGRVDILVNNAGIFMMKMMADTTGEELDRMLNINVKGVFYGCKHILPAMQKAGGGSIINISSIYGVIGAPAASAYQASKGAVRILTKSVAVEYAPYNIRANSIHPGVIRTPMTKDLMATPDSE--KAILASTILRRAAEPREVAYPVLFLASSESSYITGAEIMVDGGYTTV 753
            GRV GKI  VTGG  GMGR H  L+A EGA++IV+D+NEA G+ TV  I + GG+  F   +V   A W S V++ V+T G++D+LVNNAGI ++K + +TT EE DR  +INVKGVF+G K ILPAMQKAG GSIINISSIYG+IGAP A+AYQA+KGAVR+ TK+ AV+YA YNIR NS+HPGVI TPMTKDL+ + D E  KAIL STIL RAA+P+EV+Y VL LAS +SS++ G+E++VDGGYT V
Sbjct:    2 GRVNGKIILVTGGAMGMGRTHCELLAAEGATVIVTDMNEAEGQATVDSIKASGGKAEFYPLNVTKHADWTSVVDKIVATHGQIDVLVNNAGILILKQLEETTEEEWDRTFDINVKGVFFGTKAILPAMQKAGAGSIINISSIYGIIGAPMAAAYQATKGAVRLFTKATAVDYAQYNIRVNSVHPGVIDTPMTKDLLHSGDEETVKAILGSTILGRAAQPKEVSYAVLHLASDDSSFMNGSEMVVDGGYTAV 252          
BLAST of mRNA_P-wetherbeei_contig5430.2.1 vs. uniprot
Match: A0A496X4B4_9GAMM (Cyclopentanol dehydrogenase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A496X4B4_9GAMM)

HSP 1 Score: 299 bits (765), Expect = 2.140e-99
Identity = 150/249 (60.24%), Postives = 192/249 (77.11%), Query Frame = 1
Query:    7 GRVEGKIAFVTGGGSGMGREHALLMAEEGASIIVSDVNEAGGRETVSMINSKGGQGLFINFDVASEAAWQSAVNQAVSTFGRVDILVNNAGIFMMKMMADTTGEELDRMLNINVKGVFYGCKHILPAMQKAGGGSIINISSIYGVIGAPAASAYQASKGAVRILTKSVAVEYAPYNIRANSIHPGVIRTPMTKDLMATPDSEKAILASTILRRAAEPREVAYPVLFLASSESSYITGAEIMVDGGYTTV 753
            GRV+GK+A +TGG  GMG  H+LL+A EGA ++V+D++   G  T   I  +GG  LFI+ DVASE  WQS ++QAV  +G+VDIL+NNAGI ++K   +TT E+ D  + +N  GVF GCK ++PAM+KAGGGSI+NISSIYG+IGAP A+AYQASKGAVR+LTKS AV+YA +NIR NSIHPGVIRTP+  D++    + K  LA+TIL R AEP EV+Y VL LAS ESSY+TG+E++VDGGYTTV
Sbjct:    2 GRVDGKVALITGGAMGMGESHSLLLAREGAKVVVTDIDNEAGEATAQQIRDEGGDALFIHHDVASEEQWQSVIDQAVEAYGKVDILINNAGIVILKPNEETTVEDWDITMAVNSTGVFLGCKTVVPAMEKAGGGSIVNISSIYGIIGAPNAAAYQASKGAVRMLTKSCAVDYAQFNIRVNSIHPGVIRTPILGDMVNDEAAIKQALATTILERMAEPIEVSYAVLLLASDESSYMTGSELVVDGGYTTV 250          
BLAST of mRNA_P-wetherbeei_contig5430.2.1 vs. uniprot
Match: A0A0D1C8Y3_9MICC (SPG23_c17, whole genome shotgun sequence n=2 Tax=unclassified Arthrobacter TaxID=235627 RepID=A0A0D1C8Y3_9MICC)

HSP 1 Score: 298 bits (764), Expect = 3.140e-99
Identity = 150/250 (60.00%), Postives = 188/250 (75.20%), Query Frame = 1
Query:    1 MAGRVEGKIAFVTGGGSGMGREHALLMAEEGASIIVSDVNEAGGRETVSMINSKGGQGLFINFDVASEAAWQSAVNQAVSTFGRVDILVNNAGIFMMKMMADTTGEELDRMLNINVKGVFYGCKHILPAMQKAGGGSIINISSIYGVIGAPAASAYQASKGAVRILTKSVAVEYAPYNIRANSIHPGVIRTPMTKDLMATPDSEKAILASTILRRAAEPREVAYPVLFLASSESSYITGAEIMVDGGYTT 750
            MAGR+ GK+A VTG   GMGR HALL+A EGA ++++DV EA G+     I+  GG  LFI  DV   A WQ  + + V  FGR+D+LVNNAGI ++K + +T  EE DR L+IN KG F GCK   PA+Q AGGGSI+NISSIYG+IGAP+A+AYQASKGAVR+LTK+ AV+ A Y IR NS+HPGVI T MT++LMATP+S KA+L +TIL R   P EV+  VLFLAS ESS++TG+E++VDGGYTT
Sbjct:    1 MAGRMSGKVAIVTGAAQGMGRSHALLLAAEGAKVVLTDVREAAGKAVAEEISDAGGSALFITHDVTRSADWQRVLEETVKEFGRLDVLVNNAGILILKTLDETDEEEWDRTLDINAKGTFLGCKLAAPALQAAGGGSIVNISSIYGLIGAPSAAAYQASKGAVRLLTKAAAVDLAKYGIRVNSVHPGVIDTQMTEELMATPESTKAVLGTTILGRPGRPEEVSQAVLFLASDESSFVTGSELVVDGGYTT 250          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5430.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A353LUA1_9PROT1.030e-13076.89Cyclopentanol dehydrogenase n=2 Tax=Alphaproteobac... [more]
A0A6N6VLQ6_9HYPH3.100e-10663.45Glucose 1-dehydrogenase n=15 Tax=Bacteria TaxID=2 ... [more]
A0A2E5BV84_9HYPH5.100e-10562.65Cyclopentanol dehydrogenase n=2 Tax=Hyphomicrobial... [more]
A0A352Q5I8_9GAMM5.280e-10561.45Cyclopentanol dehydrogenase n=1 Tax=Porticoccaceae... [more]
A0A1Y5FPR8_9GAMM9.710e-10359.51Cyclopentanol dehydrogenase n=1 Tax=Gammaproteobac... [more]
A0A3B8XQJ7_9HYPH5.780e-10262.55Cyclopentanol dehydrogenase n=1 Tax=Rhodobiaceae b... [more]
A0A2A5DQ30_9PROT2.810e-10060.16Cyclopentanol dehydrogenase n=1 Tax=Rhodospirillac... [more]
A0A1Y5EQ84_9GAMM1.140e-9962.15Cyclopentanol dehydrogenase n=1 Tax=Cycloclasticus... [more]
A0A496X4B4_9GAMM2.140e-9960.24Cyclopentanol dehydrogenase n=2 Tax=Gammaproteobac... [more]
A0A0D1C8Y3_9MICC3.140e-9960.00SPG23_c17, whole genome shotgun sequence n=2 Tax=u... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5430contigP-wetherbeei_contig5430:598..1353 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1333998.M2A_2770
PFAMsadh_short_C2
Model size756
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00139,RC00144,RC01219,RC01220
KEGG koko:K00038,ko:K17754
KEGG ReactionR02229,R04831,R04834,R04844,R04847
KEGG Pathwayko00140,ko00930,ko01100,map00140,map00930,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.52e-107
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,1MUPX@1224|Proteobacteria,2TT6C@28211|Alphaproteobacteria,4BT7P@82117|unclassified Alphaproteobacteria
EC1.1.1.163,1.1.1.53
DescriptionEnoyl-(Acyl carrier protein) reductase
Cds size756
COG categoryIQ
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186811.6370118-CDS-P-wetherbeei_contig5430:597..13531683186811.6370118-CDS-P-wetherbeei_contig5430:597..1353Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5430 598..1353 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5430.2.1prot_P-wetherbeei_contig5430.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5430 598..1353 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5430.2.1

>prot_P-wetherbeei_contig5430.2.1 ID=prot_P-wetherbeei_contig5430.2.1|Name=mRNA_P-wetherbeei_contig5430.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp
MAGRVEGKIAFVTGGGSGMGREHALLMAEEGASIIVSDVNEAGGRETVSM
INSKGGQGLFINFDVASEAAWQSAVNQAVSTFGRVDILVNNAGIFMMKMM
ADTTGEELDRMLNINVKGVFYGCKHILPAMQKAGGGSIINISSIYGVIGA
PAASAYQASKGAVRILTKSVAVEYAPYNIRANSIHPGVIRTPMTKDLMAT
PDSEKAILASTILRRAAEPREVAYPVLFLASSESSYITGAEIMVDGGYTT
V*
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mRNA from alignment at P-wetherbeei_contig5430:598..1353+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5430.2.1 ID=mRNA_P-wetherbeei_contig5430.2.1|Name=mRNA_P-wetherbeei_contig5430.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig5430:598..1353+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGGACGGGTAGAAGGTAAAATTGCGTTTGTAACTGGCGGCGGCTC CGGCATGGGGCGCGAACATGCGCTTTTGATGGCTGAAGAAGGGGCCAGCA TTATCGTTTCAGACGTGAACGAAGCGGGCGGCCGTGAAACGGTTTCGATG ATCAACAGCAAGGGCGGGCAGGGCCTGTTCATCAATTTTGACGTGGCGAG CGAGGCCGCATGGCAATCCGCCGTCAATCAGGCGGTGTCCACATTCGGGC GGGTAGATATTCTGGTGAACAATGCCGGCATCTTCATGATGAAGATGATG GCGGACACAACCGGCGAAGAATTGGACCGTATGCTGAATATCAATGTCAA AGGCGTGTTCTATGGCTGCAAGCATATCCTGCCCGCGATGCAGAAGGCGG GCGGCGGATCGATCATCAATATTTCCTCGATCTATGGGGTGATCGGTGCG CCTGCGGCTTCGGCCTATCAGGCGTCAAAGGGCGCGGTGCGCATTCTGAC CAAGTCCGTGGCGGTGGAATATGCGCCATATAATATTCGCGCCAACTCCA TTCATCCTGGCGTTATTCGCACACCGATGACCAAGGATCTGATGGCCACC CCGGATTCCGAAAAGGCGATCCTGGCCTCCACCATTCTGCGCCGTGCAGC GGAACCACGCGAGGTGGCCTATCCGGTATTGTTCCTGGCGTCGAGTGAGT CCAGCTATATCACCGGCGCGGAAATCATGGTCGATGGCGGCTATACCACC GTATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5430:598..1353+

>mRNA_P-wetherbeei_contig5430.2.1 ID=mRNA_P-wetherbeei_contig5430.2.1|Name=mRNA_P-wetherbeei_contig5430.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig5430:598..1353+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGGACGGGTAGAAGGTAAAATTGCGTTTGTAACTGGCGGCGGCTC
CGGCATGGGGCGCGAACATGCGCTTTTGATGGCTGAAGAAGGGGCCAGCA
TTATCGTTTCAGACGTGAACGAAGCGGGCGGCCGTGAAACGGTTTCGATG
ATCAACAGCAAGGGCGGGCAGGGCCTGTTCATCAATTTTGACGTGGCGAG
CGAGGCCGCATGGCAATCCGCCGTCAATCAGGCGGTGTCCACATTCGGGC
GGGTAGATATTCTGGTGAACAATGCCGGCATCTTCATGATGAAGATGATG
GCGGACACAACCGGCGAAGAATTGGACCGTATGCTGAATATCAATGTCAA
AGGCGTGTTCTATGGCTGCAAGCATATCCTGCCCGCGATGCAGAAGGCGG
GCGGCGGATCGATCATCAATATTTCCTCGATCTATGGGGTGATCGGTGCG
CCTGCGGCTTCGGCCTATCAGGCGTCAAAGGGCGCGGTGCGCATTCTGAC
CAAGTCCGTGGCGGTGGAATATGCGCCATATAATATTCGCGCCAACTCCA
TTCATCCTGGCGTTATTCGCACACCGATGACCAAGGATCTGATGGCCACC
CCGGATTCCGAAAAGGCGATCCTGGCCTCCACCATTCTGCGCCGTGCAGC
GGAACCACGCGAGGTGGCCTATCCGGTATTGTTCCTGGCGTCGAGTGAGT
CCAGCTATATCACCGGCGCGGAAATCATGGTCGATGGCGGCTATACCACC
GTATAA
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