prot_P-wetherbeei_contig5406.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5406.1.1
Unique Nameprot_P-wetherbeei_contig5406.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length463
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5406.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 316..363
e-value: 4.9E-12
score: 45.9
coord: 387..434
e-value: 6.3E-11
score: 42.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 98..126
e-value: 0.57
score: 10.6
coord: 286..308
e-value: 0.34
score: 11.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 286..318
e-value: 1.5E-4
score: 19.7
coord: 320..352
e-value: 1.0E-8
score: 32.8
coord: 424..451
e-value: 2.4E-6
score: 25.4
coord: 390..422
e-value: 1.8E-4
score: 19.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 422..452
score: 10.402331
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 317..351
score: 13.142656
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 387..421
score: 11.049048
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 281..316
score: 10.599635
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 270..379
e-value: 6.1E-29
score: 103.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 380..452
e-value: 8.2E-17
score: 63.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 93..253
e-value: 2.3E-13
score: 52.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 284..379
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 315..453
coord: 98..308
coord: 213..342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5406contigP-wetherbeei_contig5406:341..2397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5406.1.1mRNA_P-wetherbeei_contig5406.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5406 339..2397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5406.1.1 ID=prot_P-wetherbeei_contig5406.1.1|Name=mRNA_P-wetherbeei_contig5406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=463bp
ASGGDAAARGVRAAIGATLDRYKMLSKEARLAAAAAAAAAAVARAGDSVG
RASSMGSKVPNGVIRWPLASAFTGGDGSGGERRVDGAAVAAIVVLERCNV
LMRAYGEAGEIALVDNLLTEMAKAGVAIDARFCNAAMTAALRCGRPDRAL
QIFGAATGLSINTNAVAAGPRGTGADDVPGGRRCSTAGGTGDVARSGAGG
SGAIEMFARGAPVAPNVKLLTTLITAYGHSNCLENAFAVLETFAGTGSTA
NCGGKGSGVVVGRKGDEGSSSSSDRGGIAPDTGLLNALAQACARTGQPDR
ARRVFTELMPSYGVKPDVQTYNILINAFARAKRPAEALSFFEAMLAAGLE
PSRVTMTVVIKAHMRRGDTAAALAVLAAMGRQGVRADAATFDTVILGLMR
RLRWQQAWAVFQAMKESGVRPTLVTYTSLMSGFTRCGFPERAIELFEEMR
AGSGTGAAAKARG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf