prot_P-wetherbeei_contig53804.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig53804.1.1
Unique Nameprot_P-wetherbeei_contig53804.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length177
Homology
BLAST of mRNA_P-wetherbeei_contig53804.1.1 vs. uniprot
Match: A0A550JD88_9DELT (Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA n=2 Tax=Desulfuromonas acetexigens TaxID=38815 RepID=A0A550JD88_9DELT)

HSP 1 Score: 111 bits (278), Expect = 2.970e-25
Identity = 67/153 (43.79%), Postives = 92/153 (60.13%), Query Frame = 0
Query:    2 LGSDRAAVTTRWGAAADPDAPGRFAATEVALAQNAELLQQAQVSGQAASPAQRRLQFDRIVLLRNRVRMQEAVDLHDGLVREGVDVPAYAQAAAADALLHLRQPEKARDLYLQAQGRGGSEFSSQVGLFYAYSDAEQHAAAIAQIDKVVEATP 154
            L ++RAA   RWG    P    RFAAT+ ALA   E L        A +   R+ + DR+V LR+RVRM EAV  ++ LV +G+++P +A+ AAADA L+LRQPE+ARDLYLQ        F++Q  LFYAY + E    A+  +D++ E  P
Sbjct:  369 LRANRAAQQVRWGIVEPPSEAERFAATDRALALLEENLAALNPGNPADAALIRQGRLDRLVALRDRVRMAEAVSEYESLVADGIEIPPFARQAAADAYLYLRQPEQARDLYLQVLEAQHGNFTAQHALFYAYIELEDFEQALTLVDRLAEREP 521          
BLAST of mRNA_P-wetherbeei_contig53804.1.1 vs. uniprot
Match: UPI0019E4AEE3 (Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019E4AEE3)

HSP 1 Score: 110 bits (274), Expect = 9.960e-25
Identity = 66/172 (38.37%), Postives = 95/172 (55.23%), Query Frame = 0
Query:    6 RAAVTTRWGAAADPDAPGRFAATEVALAQNAELLQQAQVSGQAASPAQRRLQFDRIVLLRNRVRMQEAVDLHDGLVREGVDVPAYAQAAAADALLHLRQPEKARDLYLQAQGRGGSEFSSQVGLFYAYSDAEQHAAAIAQIDKVVEATPQTINAFSPLTIADNPDYASAVAT 177
            RA++T RWG    PDA  R+  T+ A+    E L + +  G+    A+   +FD +V L+ R RM +A+ +++  V  GV +P YA   AADA +++ +PEKARDL LQA       F + + LFYAY+D E H  A   IDK+ +  P+ I A  PL    NP    A +T
Sbjct:  232 RASITVRWGRLFTPDATDRYKETDEAIRLLKENLTRLKNQGRERESARNTAEFDLMVALQERERMPDAISIYESFVDRGVKIPPYALVVAADAYMYVEEPEKARDLSLQALSEEPDNFDASMTLFYAYTDLEDHENATTLIDKLAKMQPEQIIAKWPLKRKKNPQKLYADST 403          
BLAST of mRNA_P-wetherbeei_contig53804.1.1 vs. uniprot
Match: A0A418X101_9BURK (Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA n=2 Tax=Noviherbaspirillum cavernae TaxID=2320862 RepID=A0A418X101_9BURK)

HSP 1 Score: 95.9 bits (237), Expect = 9.140e-20
Identity = 75/165 (45.45%), Postives = 93/165 (56.36%), Query Frame = 0
Query:    2 LGSDRAAVTTRWGAA---ADPDAPGRFAATEVALAQNAELLQQAQVSGQAASPAQRRLQFDRIVLLRNRVRMQEAVDLHDGLVREGVDVPAYAQAAAADALLHLRQPEKARDLYLQA-----QGRGGSEFSSQVGLFYAYSDAEQHAAAIAQIDKVVEATPQTIN 158
            L  D A  T  +G A   AD  A  RFA T+V L  N E       +G         L FDR+V LR+RVRM++AV+L+  L   GV VPAYA+AAAADA L+L QPE ARDLY +A     QG G +  + Q+ LFYAY +AEQH  A A  D +   T   +N
Sbjct:  242 LAHDAAGRTVIFGQAQLEADARA-ARFATTDVGLQANHE-------TGDRFGERPATL-FDRLVALRDRVRMRDAVELYQHLCAAGVTVPAYAKAAAADAYLYLEQPEIARDLYREAIDEVRQGGGENVRAWQIALFYAYGEAEQHDEAQAVADGLHRDTSPMMN 397          
BLAST of mRNA_P-wetherbeei_contig53804.1.1 vs. uniprot
Match: A0A2N2FUY1_9DELT (Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 TaxID=2013754 RepID=A0A2N2FUY1_9DELT)

HSP 1 Score: 95.5 bits (236), Expect = 1.240e-19
Identity = 59/143 (41.26%), Postives = 82/143 (57.34%), Query Frame = 0
Query:    7 AAVTTRWGAAADPDAPGRFAATEVALAQNAELLQQAQVSGQAASPAQRRLQFDRIVLLRNRVRMQEAVDLHDGLVREGVDVPAYAQAAAADALLHLRQPEKARDLYLQAQGRGGSEFSSQVGLFYAYSDAEQHAAAIAQIDKV 149
            AA   RWG+        RFA T+ ALA   + L +  V    A P   + +FDR+V LR+RV M EA+  ++ L  EG+  PAYA  AAA+A L+L++PE ARDLYL+        F + +GLFYAY + E   +A   ID++
Sbjct:  250 AAQQVRWGSLEPESEEKRFAETDRALALIEKNLAELDVKDPVARPFVFQARFDRVVALRDRVHMAEAIAEYESLADEGITPPAYALQAAAEAYLYLQKPEVARDLYLRVLAEEPQNFEAGLGLFYAYIETEDFPSAYDLIDRM 392          
BLAST of mRNA_P-wetherbeei_contig53804.1.1 vs. uniprot
Match: A0A0C2DWY3_9DELT (Uncharacterized protein n=2 Tax=Geoalkalibacter ferrihydriticus TaxID=392333 RepID=A0A0C2DWY3_9DELT)

HSP 1 Score: 94.7 bits (234), Expect = 2.320e-19
Identity = 57/146 (39.04%), Postives = 84/146 (57.53%), Query Frame = 0
Query:    2 LGSDRAAVTTRWGAAADPDAPGRFAATEVALAQNAELLQQAQVSGQAASPAQRRLQFDRIVLLRNRVRMQEAVDLHDGLVREGVDVPAYAQAAAADALLHLRQPEKARDLYLQAQGRGGSEFSSQVGLFYAYSDAEQHAAAIAQID 147
            L +D+A+   RWGA   P    RF  T+ AL + A+ L+    +  AA P   + ++DR+V LR+RV M +AV  +  L+     +P YA  AA DA L+L+QPE+ARDLYLQ    G  +  +++ LFYAY +     +A A +D
Sbjct:  267 LHTDQASHEVRWGALPPPAESLRFVQTDEALTRIADNLEALDETRPAAQPFALQSRYDRLVALRDRVLMADAVAQYQELIAVDAPIPGYALEAAGDAFLYLQQPEQARDLYLQVLNAGEGDNDTRLALFYAYIELNDFTSAYALVD 412          
BLAST of mRNA_P-wetherbeei_contig53804.1.1 vs. uniprot
Match: A0A3S0UAM1_9GAMM (Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3S0UAM1_9GAMM)

HSP 1 Score: 92.4 bits (228), Expect = 1.530e-18
Identity = 61/149 (40.94%), Postives = 84/149 (56.38%), Query Frame = 0
Query:    8 AVTTRWGAAADP--DAPGRFAATEVALAQNAELLQQAQVSGQAASPAQRRLQFDRIVLLRNRVRMQEAVDLHDGLVREGVDVPAYAQAAAADALLHLRQPEKARDLYLQA---QGRGGSEFSSQVGLFYAYSDAEQHAAAIAQIDKVVE 151
            A+  RWG   +     P RFA T+ AL  ++EL +  + + Q  +PA     FD +V LR+R+RMQE +  ++ L    VD+P YA AAAADA L+ RQPE+AR LY +A   Q         Q GLFYA  ++E   +A   IDKV +
Sbjct:  562 ALQIRWGEVWNDIETGPARFADTDRALTDSSELQRSLRQTDQQGTPAMNHAIFDEMVALRDRIRMQEVIARYETLTAHHVDIPPYALAAAADAYLYERQPERARQLYREALAQQSPNAQNPEWQRGLFYAEVESEDFDSAQGLIDKVTQ 710          
BLAST of mRNA_P-wetherbeei_contig53804.1.1 vs. uniprot
Match: A0A8J3AP87_9BURK (Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA n=1 Tax=Oxalicibacterium faecigallinarum TaxID=573741 RepID=A0A8J3AP87_9BURK)

HSP 1 Score: 92.0 bits (227), Expect = 2.000e-18
Identity = 66/153 (43.14%), Postives = 88/153 (57.52%), Query Frame = 0
Query:   24 RFAATEVALAQNAELLQQAQVSGQAASPAQRRLQFDRIVLLRNRVRMQEAVDLHDGLVREGVDVPAYAQAAAADALLHLRQPEKARDLYLQA--QGRGG---SEFSSQVGLFYAYSDAEQHAAAIAQIDKVVEATPQTINAFSPLTIADNPDY 171
            RFA T+ AL  NA + +            Q    FDR++ LR+R  M+E V L++ L  +GV +P YA+AAAADA L+L++PEKARDLYL A  + R G   S  S ++GL YAY +AEQH  A    D+++  TPQ  N       A N DY
Sbjct:  268 RFATTDAALDDNASVTRH--------FGEQPITDFDRMIALRDRQYMREVVQLYEALHAQGVTMPPYARAAAADAYLYLQEPEKARDLYLGAIEEARAGDVASIDSWRIGLTYAYVEAEQHRKAQQTADELLATTPQFSNWGIRGIEAPNDDY 412          
BLAST of mRNA_P-wetherbeei_contig53804.1.1 vs. uniprot
Match: A0A0B5FJ39_9DELT (Uncharacterized protein n=2 Tax=Geoalkalibacter subterraneus TaxID=483547 RepID=A0A0B5FJ39_9DELT)

HSP 1 Score: 91.3 bits (225), Expect = 3.770e-18
Identity = 60/148 (40.54%), Postives = 85/148 (57.43%), Query Frame = 0
Query:    2 LGSDRAAVTTRWGAAADPDAPGRFAATEVALAQNAELLQQAQVSGQAASPAQRRLQFDRIVLLRNRVRMQEAVDLHDGLVREGVDVPAYAQAAAADALLHLRQPEKARDLYLQAQGRGGSEFSSQVGLFYAYSDAEQHAAAIAQIDKV 149
            L +D AA   RWG+ +      RF  T+ AL + +  L++   +  A     R+ + DR+V LRNRVRM E V L+  L RE   +PAYA  AAADA L+L QPE A D+Y QA      +F +++ LFYA  + E+   AI +ID++
Sbjct:  365 LHNDAAAHQVRWGSYSPEAEKTRFLETDQALERISANLRRLHAADNAPPTLVRQGRIDRMVALRNRVRMPEVVTLYQSLQREDEFLPAYALKAAADAYLYLEQPEAAYDIYQQALHLEPDDFETRLALFYADVELEEFDRAITRIDRL 512          
BLAST of mRNA_P-wetherbeei_contig53804.1.1 vs. uniprot
Match: A0A849V4I2_9GAMM (Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA n=1 Tax=Methyloglobulus sp. TaxID=2518622 RepID=A0A849V4I2_9GAMM)

HSP 1 Score: 90.5 bits (223), Expect = 6.730e-18
Identity = 66/155 (42.58%), Postives = 88/155 (56.77%), Query Frame = 0
Query:   12 RWGAAADPDAPG--RFAATEVALAQNAELLQQAQVSG-QAASPAQRRLQFDRIVLLRNRVRMQEAVDLHDGLVREGVDVPAYAQAAAADALLHLRQPEKARDLYLQA-----QGRGGSEFSSQVGLFYAYSDAEQHAAAIAQIDKVVEATPQTIN 158
            +WG   +    G  RF +TE AL QN E+++   + G +  SP+     FDRIV LR+RVRMQEA+ L+  L    + +PAYA AA ADA L+  QPE+AR+LYLQA     Q R       Q+ LF AY D     AA   ID++V+  P  +N
Sbjct:  164 KWGGVEEKAGVGQQRFQSTEKALMQN-EVVRTLLLQGHEKNSPSSHYADFDRIVALRDRVRMQEAIALYQNLKDRQIKIPAYAVAAVADAYLYQHQPEQARELYLQALELNKQDRDYPNREWQLHLFNAYIDEFDFDAARELIDQLVKDVPPVLN 317          
BLAST of mRNA_P-wetherbeei_contig53804.1.1 vs. uniprot
Match: A0A7Z0NJD4_9BURK (Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA n=1 Tax=Alcaligenaceae bacterium TaxID=2021368 RepID=A0A7Z0NJD4_9BURK)

HSP 1 Score: 85.9 bits (211), Expect = 2.770e-16
Identity = 57/144 (39.58%), Postives = 80/144 (55.56%), Query Frame = 0
Query:    2 LGSDRAAVTTRWGAAADPDAPGRFAATEVALAQNAELLQQAQVSGQAASPAQRRLQFDRIVLLRNRVRMQEAVDLHDGLVREGVDVPAYAQAAAADALLHLRQPEKARDLYLQAQGR------GGSEFSSQVGLFYAYSDAEQH 139
            L +D AA  TR  +    +   RF   + AL     L+ Q   SG+ A     RL+FDR+  L  R RM + V  ++ L+ EGV+VP YA +  A A LHLR+PE+ARDLYL+          GGS+ + Q GLFYA  +++Q+
Sbjct:  234 LQADHAAELTRIASMPARNEKERFDVADRALGIYDRLIPQWSASGEEARRDVLRLRFDRLHALHARSRMNDVVREYEQLLAEGVEVPRYALSVVAAAYLHLRRPERARDLYLKLLAESNGSEDGGSKLADQTGLFYALQESQQY 377          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53804.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A550JD88_9DELT2.970e-2543.79Poly-beta-1,6 N-acetyl-D-glucosamine export porin ... [more]
UPI0019E4AEE39.960e-2538.37Poly-beta-1,6 N-acetyl-D-glucosamine export porin ... [more]
A0A418X101_9BURK9.140e-2045.45Poly-beta-1,6 N-acetyl-D-glucosamine export porin ... [more]
A0A2N2FUY1_9DELT1.240e-1941.26Poly-beta-1,6 N-acetyl-D-glucosamine export porin ... [more]
A0A0C2DWY3_9DELT2.320e-1939.04Uncharacterized protein n=2 Tax=Geoalkalibacter fe... [more]
A0A3S0UAM1_9GAMM1.530e-1840.94Poly-beta-1,6 N-acetyl-D-glucosamine export porin ... [more]
A0A8J3AP87_9BURK2.000e-1843.14Poly-beta-1,6 N-acetyl-D-glucosamine export porin ... [more]
A0A0B5FJ39_9DELT3.770e-1840.54Uncharacterized protein n=2 Tax=Geoalkalibacter su... [more]
A0A849V4I2_9GAMM6.730e-1842.58Poly-beta-1,6 N-acetyl-D-glucosamine export porin ... [more]
A0A7Z0NJD4_9BURK2.770e-1639.58Poly-beta-1,6 N-acetyl-D-glucosamine export porin ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 23..175
e-value: 1.1E-5
score: 27.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 49..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53804contigP-wetherbeei_contig53804:2..532 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53804.1.1mRNA_P-wetherbeei_contig53804.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig53804 2..532 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig53804.1.1 ID=prot_P-wetherbeei_contig53804.1.1|Name=mRNA_P-wetherbeei_contig53804.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=177bp
ALGSDRAAVTTRWGAAADPDAPGRFAATEVALAQNAELLQQAQVSGQAAS
PAQRRLQFDRIVLLRNRVRMQEAVDLHDGLVREGVDVPAYAQAAAADALL
HLRQPEKARDLYLQAQGRGGSEFSSQVGLFYAYSDAEQHAAAIAQIDKVV
EATPQTINAFSPLTIADNPDYASAVAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf