mRNA_P-wetherbeei_contig53705.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53705.1.1 vs. uniprot
Match: A0A353LV84_9PROT (Sec-independent protein translocase protein TatC n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LV84_9PROT) HSP 1 Score: 272 bits (695), Expect = 6.450e-90 Identity = 133/178 (74.72%), Postives = 153/178 (85.96%), Query Frame = 1
Query: 1 FAICYYFSEEIYAFLVQPYADATVGGNKRLIATALQEIFFTYVKVAMFGALCISFPFIAVQIYAFVAPGLYKNERRAFMPFLAATPVLFLMGAALVYYMVMPLALNFFLGFERGAGGLGLPIQFEAKVDEYLGLVMTFIFAFGLCFQLPVLLTLLGRVGIVSSKALREKRRYAIVGVF 534
FA C+YF+E+IYAFLVQPYADA G ++RLIATALQE+FF+Y+KVAMFGALC+SFP +A QIYAFVAPGLY+NER AF+PFL ATP+LF+ G ALVYY++MPLA FFLGFER GLPIQ EAKV+EYLGLVMT IFAFGLCFQLPVLLTLLGR G+ +S LR KR+YAIV VF
Sbjct: 35 FAFCFYFAEQIYAFLVQPYADAVAGEDRRLIATALQEVFFSYIKVAMFGALCLSFPIVAAQIYAFVAPGLYRNERSAFLPFLVATPLLFIAGGALVYYLIMPLATEFFLGFERSGAAGGLPIQLEAKVNEYLGLVMTLIFAFGLCFQLPVLLTLLGRAGLATSDGLRRKRKYAIVAVF 212
BLAST of mRNA_P-wetherbeei_contig53705.1.1 vs. uniprot
Match: A0A1G3IAI1_9PROT (Sec-independent protein translocase protein TatC n=1 Tax=Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 TaxID=1802022 RepID=A0A1G3IAI1_9PROT) HSP 1 Score: 234 bits (598), Expect = 4.240e-75 Identity = 116/180 (64.44%), Postives = 143/180 (79.44%), Query Frame = 1
Query: 1 FAICYYFSEEIYAFLVQPYADAT--VGGNKRLIATALQEIFFTYVKVAMFGALCISFPFIAVQIYAFVAPGLYKNERRAFMPFLAATPVLFLMGAALVYYMVMPLALNFFLGFERGAGGLGLPIQFEAKVDEYLGLVMTFIFAFGLCFQLPVLLTLLGRVGIVSSKALREKRRYAIVGVF 534
F +CYYF+ +IY FLVQP ADA GGN+RLI TAL E FFTY+KV+ F AL ++FPFI++Q++ FVAPGLY NE++AF+PFL ATP+LF G ALVYY + PLA FFLGFE G LPIQ EAKVD+YL LVM IFAFGLCF+LPV++TLLGR+G+VSSK ++EKR+YA+V F
Sbjct: 35 FFVCYYFATDIYGFLVQPLADAMSGTGGNRRLIFTALHEAFFTYLKVSFFAALFVAFPFISIQVWMFVAPGLYANEKKAFLPFLVATPILFFTGGALVYYFIFPLAWKFFLGFESPGGEGTLPIQLEAKVDQYLSLVMQLIFAFGLCFELPVVMTLLGRIGMVSSKGMKEKRKYAVVLAF 214
BLAST of mRNA_P-wetherbeei_contig53705.1.1 vs. uniprot
Match: A0A7V2AMH1_9PROT (Sec-independent protein translocase protein TatC n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2AMH1_9PROT) HSP 1 Score: 234 bits (597), Expect = 6.400e-75 Identity = 122/180 (67.78%), Postives = 141/180 (78.33%), Query Frame = 1
Query: 1 FAICYYFSEEIYAFLVQPYAD--ATVGGNKRLIATALQEIFFTYVKVAMFGALCISFPFIAVQIYAFVAPGLYKNERRAFMPFLAATPVLFLMGAALVYYMVMPLALNFFLGFERGAGGLGLPIQFEAKVDEYLGLVMTFIFAFGLCFQLPVLLTLLGRVGIVSSKALREKRRYAIVGVF 534
F I YYF+ +IY FLVQP AD A +GGN+RLI TALQE FFTYVKVA F AL ++FPFIA+Q + FVAPGLYKNE+R +PFL ATP+LF MG +LVYY + PLA FFL FE G LPIQ EAKVDEYL LVM IFAFGLCF+LPVL+TLLGRVG+V++K +R KRRYAIV F
Sbjct: 30 FFISYYFAPDIYDFLVQPLADVLADMGGNRRLIFTALQEAFFTYVKVAFFAALFLAFPFIAMQFWLFVAPGLYKNEKRTMLPFLVATPILFFMGGSLVYYYIFPLAWKFFLSFESVGGAGALPIQLEAKVDEYLSLVMRLIFAFGLCFELPVLMTLLGRVGMVTAKGMRSKRRYAIVLAF 209
BLAST of mRNA_P-wetherbeei_contig53705.1.1 vs. uniprot
Match: X5MEZ2_9HYPH (Sec-independent protein translocase protein TatC n=1 Tax=Candidatus Phaeomarinobacter ectocarpi TaxID=1458461 RepID=X5MEZ2_9HYPH) HSP 1 Score: 234 bits (597), Expect = 7.500e-75 Identity = 117/179 (65.36%), Postives = 146/179 (81.56%), Query Frame = 1
Query: 1 FAICYYFSEEIYAFLVQPYADATVGG-NKRLIATALQEIFFTYVKVAMFGALCISFPFIAVQIYAFVAPGLYKNERRAFMPFLAATPVLFLMGAALVYYMVMPLALNFFLGFERGAGGLGLPIQFEAKVDEYLGLVMTFIFAFGLCFQLPVLLTLLGRVGIVSSKALREKRRYAIVGVF 534
F + +YF+E+IYA+L QP ADA G +RLI TALQE FFTY+KVAMF ALC+SFP++A Q++ F+APGLY++ER AF+PFLAATPVLF++GA+LV+Y +MP+A FFLGFE G LPIQ EAKV+EYL LVMT IFAFGL FQLPVLL L+GR G+VSS+ L ++R+YAIVG F
Sbjct: 39 FCVTFYFAEDIYAYLTQPLADALSGDPGRRLIYTALQETFFTYIKVAMFAALCLSFPYVAGQVWLFIAPGLYRDERGAFLPFLAATPVLFILGASLVFYFIMPMATEFFLGFETTGGDGALPIQLEAKVNEYLSLVMTLIFAFGLAFQLPVLLMLMGRAGLVSSQGLAKQRKYAIVGAF 217
BLAST of mRNA_P-wetherbeei_contig53705.1.1 vs. uniprot
Match: A0A2S6U7Y4_9PROT (Sec-independent protein translocase protein TatC n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6U7Y4_9PROT) HSP 1 Score: 233 bits (595), Expect = 3.100e-74 Identity = 118/180 (65.56%), Postives = 142/180 (78.89%), Query Frame = 1
Query: 1 FAICYYFSEEIYAFLVQPYADAT--VGGNKRLIATALQEIFFTYVKVAMFGALCISFPFIAVQIYAFVAPGLYKNERRAFMPFLAATPVLFLMGAALVYYMVMPLALNFFLGFERGAGGLGLPIQFEAKVDEYLGLVMTFIFAFGLCFQLPVLLTLLGRVGIVSSKALREKRRYAIVGVF 534
F ICYYF+ ++Y FLV P AD +GG +RLI TAL E FFTY+KVA F AL +SFPFIA+QI+ F+APGLYKNE++AF PFL ATP+LF MG ALVYY + PLA +FFL FE G LPIQ EAKVD+YL LVM IFAFGLCF+LPV++TLLGRVG+V+SK ++EKR+YAIV F
Sbjct: 39 FFICYYFAPDLYNFLVAPLADVLEKMGGQRRLIFTALHEAFFTYIKVAFFAALFLSFPFIAIQIWMFIAPGLYKNEKKAFAPFLIATPILFFMGGALVYYFIFPLAWSFFLSFESVGGAGALPIQLEAKVDQYLSLVMRLIFAFGLCFELPVVMTLLGRVGMVTSKGMKEKRKYAIVLAF 218
BLAST of mRNA_P-wetherbeei_contig53705.1.1 vs. uniprot
Match: A0A7Y4WP61_9PROT (Sec-independent protein translocase protein TatC n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y4WP61_9PROT) HSP 1 Score: 231 bits (588), Expect = 1.790e-73 Identity = 124/179 (69.27%), Postives = 138/179 (77.09%), Query Frame = 1
Query: 1 FAICYYFSEEIYAFLVQPYADATVG-GNKRLIATALQEIFFTYVKVAMFGALCISFPFIAVQIYAFVAPGLYKNERRAFMPFLAATPVLFLMGAALVYYMVMPLALNFFLGFERGAGGLGLPIQFEAKVDEYLGLVMTFIFAFGLCFQLPVLLTLLGRVGIVSSKALREKRRYAIVGVF 534
F CY+F+E IYAFL P A A G +R+I TAL E FFTY+KVA FGALCISFP IA QIY FVAPGLY+NERRAF PFL ATPVLF +GAALVYY +MP+A+ FFLGFE G LPIQ EAKV +YL L+M+ IFAFGL FQLPVLLTLLGRVGIVSS L+ RRYAIV F
Sbjct: 42 FVFCYFFAEHIYAFLTHPLAQAFEGQSGRRMIFTALYETFFTYIKVAGFGALCISFPIIATQIYMFVAPGLYRNERRAFWPFLIATPVLFALGAALVYYGLMPVAIKFFLGFETPGGPGSLPIQLEAKVADYLDLIMSLIFAFGLSFQLPVLLTLLGRVGIVSSLFLKTNRRYAIVFAF 220
BLAST of mRNA_P-wetherbeei_contig53705.1.1 vs. uniprot
Match: A0A524HN02_9HYPH (Sec-independent protein translocase protein TatC n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A524HN02_9HYPH) HSP 1 Score: 231 bits (588), Expect = 1.970e-73 Identity = 116/179 (64.80%), Postives = 142/179 (79.33%), Query Frame = 1
Query: 1 FAICYYFSEEIYAFLVQPYADATVGG-NKRLIATALQEIFFTYVKVAMFGALCISFPFIAVQIYAFVAPGLYKNERRAFMPFLAATPVLFLMGAALVYYMVMPLALNFFLGFERGAGGLGLPIQFEAKVDEYLGLVMTFIFAFGLCFQLPVLLTLLGRVGIVSSKALREKRRYAIVGVF 534
F +C+YF+E IY FL QP ADA +R+IATALQE F TYVKV FGALC++FPF+A Q++ F+APGLY++ER AF+PFL TPV+FL+GA+ VYY++MP+A+ FFLGFE G LPI+ EA+V EYL LVMT IFAF LCFQLP+LLTLLG+VGIV+S LR RRYAIVGVF
Sbjct: 41 FIVCFYFAELIYNFLAQPLADALADQPERRMIATALQETFLTYVKVGAFGALCLAFPFMASQLWLFIAPGLYRHERNAFLPFLVMTPVMFLLGASFVYYVLMPMAIRFFLGFEAPGGNGSLPIEVEARVSEYLSLVMTLIFAFVLCFQLPILLTLLGKVGIVTSDGLRSARRYAIVGVF 219
BLAST of mRNA_P-wetherbeei_contig53705.1.1 vs. uniprot
Match: UPI00115D513B (twin-arginine translocase subunit TatC n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115D513B) HSP 1 Score: 231 bits (588), Expect = 2.530e-73 Identity = 123/181 (67.96%), Postives = 143/181 (79.01%), Query Frame = 1
Query: 1 FAICYYFSEEIYAFLVQPYADAT--VGGNKRLIATALQEIFFTYVKVAMFGALCISFPFIAVQIYAFVAPGLYKNERRAFMPFLAATPVLFLMGAALVYYMVMPLALNFFLGFERG-AGGLGLPIQFEAKVDEYLGLVMTFIFAFGLCFQLPVLLTLLGRVGIVSSKALREKRRYAIVGVF 534
F +CYYF+E IY FLVQP AD GG +R+I TAL E FFTY+KVA F AL I FP A Q++AFVAPGLYK+ER+AF+PFL ATP+LF +GAALVYY+++P+A +FF+ FE AGG LPIQ EAKV EYL LVM IFAFGL FQLPVLLTLL RVG+VSS+AL KRRYAIVGVF
Sbjct: 25 FFVCYYFAEPIYGFLVQPLADILHEQGGERRMIYTALTEAFFTYLKVAGFAALYICFPIFAGQLWAFVAPGLYKHERKAFLPFLVATPILFTIGAALVYYLILPMAWHFFISFETASAGGTALPIQLEAKVGEYLSLVMKLIFAFGLAFQLPVLLTLLARVGLVSSQALAAKRRYAIVGVF 205
BLAST of mRNA_P-wetherbeei_contig53705.1.1 vs. uniprot
Match: A0A7V7JLM4_9PROT (Twin-arginine translocase subunit TatC (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7V7JLM4_9PROT) HSP 1 Score: 228 bits (582), Expect = 2.670e-73 Identity = 123/181 (67.96%), Postives = 144/181 (79.56%), Query Frame = 1
Query: 1 FAICYYFSEEIYAFLVQPYAD--ATVGGNKRLIATALQEIFFTYVKVAMFGALCISFPFIAVQIYAFVAPGLYKNERRAFMPFLAATPVLFLMGAALVYYMVMPLALNFFLGFER-GAGGLGLPIQFEAKVDEYLGLVMTFIFAFGLCFQLPVLLTLLGRVGIVSSKALREKRRYAIVGVF 534
F +CYYFS EIY FLV+P AD A G N+R+I TAL E FFTY+KVA F A + FP AVQ++AFVAPGLYK+E++AF+PFLAATP+LFL GA+ VYY+V+P+A FFL FE GA GLPIQ EAKV+EYL LVM IFAFG+ FQ+PVLLTLL RVGI+SSK LREKRRYAIV VF
Sbjct: 25 FIVCYYFSREIYGFLVRPLADVMAAQGENRRMIYTALTEAFFTYMKVAAFAAAFVCFPVWAVQLWAFVAPGLYKDEKKAFLPFLAATPLLFLAGASTVYYLVLPVAWKFFLSFESLGADTGGLPIQLEAKVEEYLSLVMKLIFAFGIAFQMPVLLTLLARVGIISSKDLREKRRYAIVMVF 205
BLAST of mRNA_P-wetherbeei_contig53705.1.1 vs. uniprot
Match: A0A1G3HUT6_9PROT (Sec-independent protein translocase protein TatC n=1 Tax=Rhodospirillales bacterium RIFCSPLOWO2_01_FULL_65_14 TaxID=1802020 RepID=A0A1G3HUT6_9PROT) HSP 1 Score: 231 bits (589), Expect = 3.210e-73 Identity = 119/180 (66.11%), Postives = 140/180 (77.78%), Query Frame = 1
Query: 1 FAICYYFSEEIYAFLVQPYADAT--VGGNKRLIATALQEIFFTYVKVAMFGALCISFPFIAVQIYAFVAPGLYKNERRAFMPFLAATPVLFLMGAALVYYMVMPLALNFFLGFERGAGGLGLPIQFEAKVDEYLGLVMTFIFAFGLCFQLPVLLTLLGRVGIVSSKALREKRRYAIVGVF 534
F +CYYF+ IY FLVQP AD G +RLI TAL E FFTY+KVA+F AL ++FPFIA+Q++AF+APGLYK+E+RAF PFL ATP+LF MG ALVYY++ PLA FFL FE G LPIQ EAKVD+YL LVM IFAFGLCF+LPV++TLL RVGIV+SK L EKRRYAIV F
Sbjct: 35 FFVCYYFAPHIYDFLVQPLADILDKSNGPRRLIYTALHEAFFTYIKVALFAALFLAFPFIAIQVWAFIAPGLYKHEKRAFAPFLVATPILFFMGGALVYYLIFPLAWKFFLSFESAGGHGTLPIQLEAKVDQYLSLVMRLIFAFGLCFELPVVMTLLARVGIVTSKGLSEKRRYAIVLAF 214 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53705.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53705.1.1 >prot_P-wetherbeei_contig53705.1.1 ID=prot_P-wetherbeei_contig53705.1.1|Name=mRNA_P-wetherbeei_contig53705.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp FAICYYFSEEIYAFLVQPYADATVGGNKRLIATALQEIFFTYVKVAMFGAback to top mRNA from alignment at P-wetherbeei_contig53705:1..534+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53705.1.1 ID=mRNA_P-wetherbeei_contig53705.1.1|Name=mRNA_P-wetherbeei_contig53705.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig53705:1..534+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53705:1..534+ >mRNA_P-wetherbeei_contig53705.1.1 ID=mRNA_P-wetherbeei_contig53705.1.1|Name=mRNA_P-wetherbeei_contig53705.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig53705:1..534+ (Phaeothamnion wetherbeei SAG_119_79)back to top |