prot_P-wetherbeei_contig5300.5.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5300.5.1
Unique Nameprot_P-wetherbeei_contig5300.5.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length260
Homology
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BLAST of mRNA_P-wetherbeei_contig5300.5.1 vs. uniprot
Match: A0A6H5L4E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E1_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 6.220e-28
Identity = 91/205 (44.39%), Postives = 122/205 (59.51%), Query Frame = 0 
Query:   50 VPLRYLPESHPAAVRIQTWWRCRIAVKRCQQQRALRVWAATKIQSLFRMRRGRRVYRKQRRVAEIRQRVREDKEAELMAVEDARSRAHRKDQSALRTIERAIFGYLGRQKALQKRRERQLAKAQARVQEKLAALERYQREQALLAVRRLEKDRWAAKLQAFWRGVLARRRCARIMAERCRGTAVTRIQLMCRYRSARLDAAARRR 254
            V + + PE  PAAV IQ  WR   A K  +++R  R WAA K+QS FR RR RR++ KQ R   IR  VRE+KEA+ MAV D  S    K + AL T+ R + GY GR+ A ++RR+ +L +A  R  E+  AL R++  Q  L V R ++   A  +QA +R  LAR+R A I  +  R  A T IQ M R+R AR +AAAR+R
Sbjct:   38 VAVEHPPEWDPAAVSIQAAWRGYSARKAYEEERVTRQWAAVKVQSCFRARRARRLFNKQMRYKHIRDMVREEKEADEMAVHDRESLRLMKYERALCTLGRVLLGYKGRKIARERRRQLRLEEAGKRFAEREEALRRHEETQRRLEVLRKDEKLAATIIQAVYRSRLARKRVALIREDNRRTRAATMIQQMIRFRGARHEAAARKR 242
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5300.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L4E1_9PHAE6.220e-2844.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 169..189
NoneNo IPR availableCOILSCoilCoilcoord: 119..139
NoneNo IPR availableGENE3D1.20.5.190coord: 58..114
e-value: 3.6E-6
score: 28.8
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 57..79
e-value: 4.8
score: 16.1
coord: 84..106
e-value: 57.0
score: 7.4
coord: 199..221
e-value: 0.12
score: 21.4
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 87..106
e-value: 0.019
score: 14.7
coord: 202..220
e-value: 3.6E-4
score: 20.1
coord: 60..78
e-value: 0.067
score: 13.0
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 88..113
score: 8.407001
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 200..227
score: 8.114201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5300contigP-wetherbeei_contig5300:1987..3051 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5300.5.1mRNA_P-wetherbeei_contig5300.5.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5300 1986..3051 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5300.5.1 ID=prot_P-wetherbeei_contig5300.5.1|Name=mRNA_P-wetherbeei_contig5300.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=260bp
VVAAAAVADAEAPALRSAEDATRAATAAADTAAIDAAAAAKAAAAAAKAV
PLRYLPESHPAAVRIQTWWRCRIAVKRCQQQRALRVWAATKIQSLFRMRR
GRRVYRKQRRVAEIRQRVREDKEAELMAVEDARSRAHRKDQSALRTIERA
IFGYLGRQKALQKRRERQLAKAQARVQEKLAALERYQREQALLAVRRLEK
DRWAAKLQAFWRGVLARRRCARIMAERCRGTAVTRIQLMCRYRSARLDAA
ARRREAARVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS