mRNA_P-wetherbeei_contig52954.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52954.1.1 vs. uniprot
Match: A0A1W6ZRF1_9HYPH (Iron ABC transporter permease n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZRF1_9HYPH) HSP 1 Score: 60.8 bits (146), Expect = 8.360e-10 Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 1
Query: 1 MGRIFDFIAVPLAYPFMQRALVVALLVGAVCAVLSCFLILK 123
M + DF A+PLAYPFMQRALVV+LLV AVCAVLSC+L+LK
Sbjct: 1 MTTLIDFFAMPLAYPFMQRALVVSLLVAAVCAVLSCYLVLK 41
BLAST of mRNA_P-wetherbeei_contig52954.1.1 vs. uniprot
Match: A0A2W4QU81_9PROT (Iron ABC transporter permease (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4QU81_9PROT) HSP 1 Score: 56.2 bits (134), Expect = 2.160e-9 Identity = 27/41 (65.85%), Postives = 38/41 (92.68%), Query Frame = 1
Query: 1 MGRIFDFIAVPLAYPFMQRALVVALLVGAVCAVLSCFLILK 123
M +++F+A+PL++PFMQRAL+VA+LVGAV AVLSC+L+LK
Sbjct: 1 MEAVWNFVALPLSFPFMQRALIVAVLVGAVSAVLSCYLVLK 41
BLAST of mRNA_P-wetherbeei_contig52954.1.1 vs. uniprot
Match: A0A327KTJ0_9HYPH (Iron ABC transporter permease n=2 Tax=Rhodoplanes elegans TaxID=29408 RepID=A0A327KTJ0_9HYPH) HSP 1 Score: 59.7 bits (143), Expect = 2.160e-9 Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 1
Query: 16 DFIAVPLAYPFMQRALVVALLVGAVCAVLSCFLILK 123
D+I+ PLAYPFMQRALVVA+LVGAVCAVLSCFL+LK
Sbjct: 4 DWISGPLAYPFMQRALVVAVLVGAVCAVLSCFLVLK 39
BLAST of mRNA_P-wetherbeei_contig52954.1.1 vs. uniprot
Match: UPI00199F219B (Metal ABC transporter permease n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=UPI00199F219B) HSP 1 Score: 59.7 bits (143), Expect = 2.180e-9 Identity = 30/36 (83.33%), Postives = 35/36 (97.22%), Query Frame = 1
Query: 16 DFIAVPLAYPFMQRALVVALLVGAVCAVLSCFLILK 123
D+I VPL+YPFMQRALVVA+LVGAVCAVLSC+L+LK
Sbjct: 3 DWITVPLSYPFMQRALVVAVLVGAVCAVLSCYLVLK 38
BLAST of mRNA_P-wetherbeei_contig52954.1.1 vs. uniprot
Match: A0A363TVU6_9BRAD (Iron ABC transporter permease n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TVU6_9BRAD) HSP 1 Score: 59.3 bits (142), Expect = 2.910e-9 Identity = 29/36 (80.56%), Postives = 35/36 (97.22%), Query Frame = 1
Query: 16 DFIAVPLAYPFMQRALVVALLVGAVCAVLSCFLILK 123
D+IA PLAYPFMQRALVV+++VGAVCAVLSC+L+LK
Sbjct: 5 DWIAAPLAYPFMQRALVVSIIVGAVCAVLSCYLVLK 40
BLAST of mRNA_P-wetherbeei_contig52954.1.1 vs. uniprot
Match: A0A2W4KTA1_9PROT (Iron ABC transporter permease n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KTA1_9PROT) HSP 1 Score: 59.3 bits (142), Expect = 3.070e-9 Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 1
Query: 1 MGRIFDFIAVPLAYPFMQRALVVALLVGAVCAVLSCFLILK 123
M ++DF AVPLAYPFMQRAL+VA+L+GAV AVLSC+L+LK
Sbjct: 1 MTALWDFFAVPLAYPFMQRALLVAVLIGAVSAVLSCYLVLK 41
BLAST of mRNA_P-wetherbeei_contig52954.1.1 vs. uniprot
Match: A0A7C4XYT7_9HYPH (Metal ABC transporter permease n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XYT7_9HYPH) HSP 1 Score: 59.3 bits (142), Expect = 3.110e-9 Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 1
Query: 1 MGRIFDFIAVPLAYPFMQRALVVALLVGAVCAVLSCFLILK 123
M ++DF+ VPL+Y FMQRALVVA+LVGAVCAVLSC+L+LK
Sbjct: 1 MTTLWDFLVVPLSYGFMQRALVVAVLVGAVCAVLSCYLVLK 41
BLAST of mRNA_P-wetherbeei_contig52954.1.1 vs. uniprot
Match: A0A371B1G6_9HYPH (Metal ABC transporter permease n=1 Tax=Pseudolabrys sp. GY_H TaxID=2292256 RepID=A0A371B1G6_9HYPH) HSP 1 Score: 58.9 bits (141), Expect = 4.120e-9 Identity = 28/41 (68.29%), Postives = 37/41 (90.24%), Query Frame = 1
Query: 1 MGRIFDFIAVPLAYPFMQRALVVALLVGAVCAVLSCFLILK 123
M +FD++ VPL+YPFMQRAL+V+LLV AVCA+LSC+L+LK
Sbjct: 1 MNILFDWLVVPLSYPFMQRALLVSLLVAAVCAILSCYLVLK 41
BLAST of mRNA_P-wetherbeei_contig52954.1.1 vs. uniprot
Match: Q2IUK9_RHOP2 (ABC-3 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) TaxID=316058 RepID=Q2IUK9_RHOP2) HSP 1 Score: 58.5 bits (140), Expect = 5.740e-9 Identity = 28/41 (68.29%), Postives = 36/41 (87.80%), Query Frame = 1
Query: 1 MGRIFDFIAVPLAYPFMQRALVVALLVGAVCAVLSCFLILK 123
M +FD+ A PLAYPFMQRALV++++V AVCAVLSC+L+LK
Sbjct: 1 MSELFDWFAGPLAYPFMQRALVISVMVAAVCAVLSCYLVLK 41
BLAST of mRNA_P-wetherbeei_contig52954.1.1 vs. uniprot
Match: A0A4Q2J492_9BURK (Metal ABC transporter permease n=1 Tax=Oxalobacteraceae bacterium CAVE-383 TaxID=2478672 RepID=A0A4Q2J492_9BURK) HSP 1 Score: 58.5 bits (140), Expect = 5.950e-9 Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = 1
Query: 4 GRIFDFIAVPLAYPFMQRALVVALLVGAVCAVLSCFLILK 123
G + D+I P++YPFMQRALV+ALLVGAVCAVLSC+L+L+
Sbjct: 6 GFLMDWIMAPMSYPFMQRALVIALLVGAVCAVLSCYLVLR 45 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52954.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52954.1.1 >prot_P-wetherbeei_contig52954.1.1 ID=prot_P-wetherbeei_contig52954.1.1|Name=mRNA_P-wetherbeei_contig52954.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=41bp MGRIFDFIAVPLAYPFMQRALVVALLVGAVCAVLSCFLILKback to top mRNA from alignment at P-wetherbeei_contig52954:3..125- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52954.1.1 ID=mRNA_P-wetherbeei_contig52954.1.1|Name=mRNA_P-wetherbeei_contig52954.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=123bp|location=Sequence derived from alignment at P-wetherbeei_contig52954:3..125- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52954:3..125- >mRNA_P-wetherbeei_contig52954.1.1 ID=mRNA_P-wetherbeei_contig52954.1.1|Name=mRNA_P-wetherbeei_contig52954.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=123bp|location=Sequence derived from alignment at P-wetherbeei_contig52954:3..125- (Phaeothamnion wetherbeei SAG_119_79)back to top |