mRNA_P-wetherbeei_contig12367.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12367.2.1
Unique NamemRNA_P-wetherbeei_contig12367.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12367.2.1 vs. uniprot
Match: A0A3C0TXH7_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TXH7_9PROT)

HSP 1 Score: 402 bits (1032), Expect = 9.060e-139
Identity = 204/286 (71.33%), Postives = 256/286 (89.51%), Query Frame = 1
Query:   13 HSKILPRNMLGSRLLPLVIAVNVYLASLAILGGLALIGATGQWATELDQLVTVQVPPESGVSGDAVVKSVLGVLRDHPSVAQARALELSEMEALLAPWLGQSAAIKDLPLPQLVDVELRPDGDLDSLRKRLDAEFPGVEIDDHRQWREQMQSIATSARLICWSLVAMISLAAIAVIIFATRASLENQNELVALMHLIGAHNSFVAGEFQKHFLGIGVIGVLIGLVPVVLTIGAVLYLTGDDPAPWMGRMTLGPVDYILAALPPLTAALITMLTARLTVLRALAVLD 870
            HSKILPR M+G+RLLPL+IAVNVYLASLAI GGLALI +TGQW+ E++QLVTVQVPPE+GVSGDAVVKSVLGVLR+HPSVA+AR LELSEMEALL+PWLG+++AIK+LPLPQL+DVELR  G++DSLRKRL+AEFPGVEIDDHRQWR QM ++A ++RL+C+++ +MI LAA++VI+FATRASLE+Q +LVAL+H+IGAHN FVAGEFQK+FL +G++G ++GL+ + L++ A+  L GD+PAPW+ R++ GPVDY L ALP L+AALITMLTAR TVLR LA +D
Sbjct:    3 HSKILPRQMMGARLLPLIIAVNVYLASLAITGGLALIASTGQWSNEIEQLVTVQVPPEAGVSGDAVVKSVLGVLREHPSVAKARPLELSEMEALLSPWLGRNSAIKELPLPQLIDVELRQGGEIDSLRKRLEAEFPGVEIDDHRQWRGQMLALANTSRLLCFTITSMILLAAVSVIVFATRASLESQGDLVALLHMIGAHNRFVAGEFQKYFLRLGLMGAVLGLMLLALSLVAINILIGDNPAPWLMRISFGPVDYALTALPLLSAALITMLTARFTVLRTLAAMD 288          
BLAST of mRNA_P-wetherbeei_contig12367.2.1 vs. uniprot
Match: A0A353LMP7_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LMP7_9PROT)

HSP 1 Score: 228 bits (581), Expect = 2.230e-70
Identity = 125/282 (44.33%), Postives = 180/282 (63.83%), Query Frame = 1
Query:   13 HSKILPRNMLGSRLLPLVIAVNVYLASLAILGGLALIGATGQWATELDQLVTVQVPPESGVSGDAVVKSVLGVLRDHPSVAQARALELSEMEALLAPWLGQSAAIKDLPLPQLVDVELRPDGDLDSLRKRLDAEFPGVEIDDHRQWREQMQSIATSARLICWSLVAMISLAAIAVIIFATRASLENQNELVALMHLIGAHNSFVAGEFQKHFLGIGVIGVLIGLVPVVLTIGAVLYLTGDDPAPWMGRMTLGPVDYILAALPPLTAALITMLTARLTVLRAL 858
             S ILP+ MLG R LPLVIAVNV+LA L IL  + +IG   +W+ ++ +L +VQ+PP  G +GDA  ++VL VL + P +  A+ L+   +  LLAPWLG   A+ DLP+PQ++D+EL P  D+ +LR RL+AEFPG+ +DDH  W+ +   I T        ++ +I LA + +I+F TRA+L + + LV  MHLIGA ++F A +FQKHFLG+G+ G L+G VPV      +       P  W+    +  ++Y +  LPP+ AAL+TM TAR+ VLR L
Sbjct:    5 RSAILPKQMLGDRALPLVIAVNVFLAGLTILTAVTVIGTVDRWSGDVARLASVQLPP--GGNGDAAAEAVLSVLAEDPDIVHAQRLDEKAVSELLAPWLGTGNAVGDLPIPQIIDIELSPQADVAALRARLEAEFPGIVVDDHADWQAKTARIRTLVYYAAGFVILLIILAGVIMIVFTTRANLRDHHHLVETMHLIGATDAFTALQFQKHFLGLGIQGGLLGAVPVFAVTFGLARFAEYQPDLWLPGNGVPLINYSVLILPPVIAALLTMATARIAVLRIL 284          
BLAST of mRNA_P-wetherbeei_contig12367.2.1 vs. uniprot
Match: A0A7Y4T822_9PROT (ABC transporter permease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y4T822_9PROT)

HSP 1 Score: 182 bits (463), Expect = 1.430e-52
Identity = 108/286 (37.76%), Postives = 168/286 (58.74%), Query Frame = 1
Query:   16 SKILPRNMLGSRLLPLVIAVNVYLASLAILGGLALIGATGQWATELDQLVTVQVPPESGVSGDAVVKSVLGVLRDHPSVAQARALELSEMEALLAPWLGQSAAIKDLPLPQLVDVELRPDG-DLDSLRKRLDAEFPGVEIDDHRQWREQMQSIATSARLICWSLVAMISLAAIAVIIFATRASLENQNELVALMHLIGAHNSFVAGEFQKHFLGIGVIGVLIGLVPVVLTIGAVLYLTGDDPAP----WMGRMTLGPVDYILAALPPLTAALITMLTARLTVLRAL 858
            S ++P        L  ++AV  +LA LA+   L L     +W   L   VTVQ+ P + +S D  VK  L ++++ P V  ARAL  ++ E +L PWLGQ   ++DLP+PQL++V L+P   +L+ L + L    PG  +DDH++W  ++ + ATS+  + WS++ +I+ A +A++IFAT+A L+   E+V ++H+IGA + F+A EFQ+HFL +GV G +IGLV   +T+    +L     AP    ++ +    P+ Y    L P+   LI M TAR TVLR L
Sbjct:    5 SGLMPAESASGATLHTIVAVMSFLACLALGFVLTLGRLASEWTEGLSGSVTVQLLPSAQISADDQVKEALRLVKNWPGVFSARALSRADAEKMLEPWLGQGNVLQDLPVPQLIEVTLQPGPVELEGLGRALSDGVPGAHLDDHQRWNAELAAFATSSEAVGWSVLLLITAATLAIVIFATQAGLQAHREIVEVVHMIGARDVFIANEFQRHFLWLGVRGGIIGLVLAAVTLVGSSFLMDSREAPVGAQYLPQFVSSPLHYTWLLLVPVMMGLIAMWTARFTVLRVL 290          
BLAST of mRNA_P-wetherbeei_contig12367.2.1 vs. uniprot
Match: UPI0004AE7180 (FtsX-like permease family protein n=1 Tax=Rhodovibrio salinarum TaxID=1087 RepID=UPI0004AE7180)

HSP 1 Score: 178 bits (452), Expect = 6.830e-51
Identity = 115/297 (38.72%), Postives = 174/297 (58.59%), Query Frame = 1
Query:    1 MIIPHSKILPRNMLGS-RLLPLVIAVNVYLASLAILGGLALIGATGQWATELDQLVTVQVPP---ESGVSGD-AVVKSVLGVLRDHPSVAQARALELSEMEALLAPWLGQSAAIKDLPLPQLVDVELRPDG--DLDSLRKRLDAEFPGVEIDDHRQWREQMQSIATSARLICWSLVAMISLAAIAVIIFATRASLENQNELVALMHLIGAHNSFVAGEFQKHFLGIGVIGVLIGLVPVVLTIGAVLYLTGDDPAPWMGRMTLGPVDYILAALPPLTAALITMLTARLTVLRALAVLD 870
            MI+   + +P N   S R LP +IA  VYLA+LA+   +A+   +  W T L   +TVQ+PP   +S  SG  A V +VL VLR  P V  A  L  +EM  LLAPWLG++A+  DLPLP L+ VE+ PD   +L +L++RL     G  +DDH++   ++  +A + +L+   +VA++  AA+  ++F TR  L     ++ L+HLIGAH+++VA +FQ+H L +G+ G L+GL     T+GA+    G +    +  +TL  + +   A  PL    + M+TAR+TVLR LA L 
Sbjct:    1 MILARQRDVPLNKDASARFLPWLIAFMVYLATLALAAAIAVSNVSQAWDTALAGKLTVQIPPPPADSAASGQTARVDAVLDVLRQTPGVRSAEQLGRAEMTELLAPWLGEAASSTDLPLPALIAVEVAPDRTPELATLQRRLAEAASGTRVDDHQRTLGRLLEVARTLQLLAVLVVALVGAAAVVTVVFVTRTGLSIHRNVIELLHLIGAHDAYVARQFQRHALRLGLTGGLVGLGLAAATLGALAQWVGQETGAIVPELTLSQLQWFALAGVPLATTGVAMITARVTVLRTLAKLS 297          
BLAST of mRNA_P-wetherbeei_contig12367.2.1 vs. uniprot
Match: A0A512E0H0_9PROT (Cell division protein n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512E0H0_9PROT)

HSP 1 Score: 178 bits (451), Expect = 8.620e-51
Identity = 114/282 (40.43%), Postives = 167/282 (59.22%), Query Frame = 1
Query:   25 LPRNMLGSRLLPLVIAVNVYLASLAILGGLALIGATGQWATELDQLVTVQVPP--ESGVSGDAVVKSVLGVLRDHPSVAQARALELSEMEALLAPWLGQSAAIKDLPLPQLVDVELRPDG-DLDSLRKRLDAEFPGVEIDDHRQWREQMQSIATSARLICWSLVAMISLAAIAVIIFATRASLENQNELVALMHLIGAHNSFVAGEFQKHFLGIGVIGVLIGLVPVVLTIGAVLYLTGDDPAPWMGRMTLGPVDYILAALPPLTAALITMLTARLTVLRALA 861
            L R++ G R LP +IA+ VYLA LA+ G + L G   +W   L   +T+QVPP  +   S DA V+S LGVLR  P +++A  L+  +M  LL PWLG  A    LP+P L+DV +     D+  L +RL A  PG E+DDH  W + + +IA +   +   +VA++  AA+A +IF +RA L     +V L+H++GA + +VA +FQ H LG+ V G + G V    T+  +   +G+  A  M  M+L P+ ++  A  PL AAL+  +TARLTV+RALA
Sbjct:   10 LQRDVTG-RFLPWIIALMVYLAILALAGSMVLSGMAQRWDRGLAGTLTIQVPPLPDGQPSLDARVESALGVLRATPGISRAEPLKSEQMAGLLEPWLGDGALSAGLPVPALIDVTMSGGRIDVRGLAQRLKAAVPGAEVDDHAAWLKDVLTIARAVETVALGVVALVGGAAVATVIFVSRAGLAIHGAVVELLHVMGAPDRYVARQFQSHVLGLAVRGGIAGTVLAAATLFGLTRASGEFSAGLMPDMSLTPLQFLSLAGVPLIAALLAAVTARLTVMRALA 290          
BLAST of mRNA_P-wetherbeei_contig12367.2.1 vs. uniprot
Match: A0A2Z4UMW2_9HYPH (Cell division ABC transporter subunit FtsX n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2Z4UMW2_9HYPH)

HSP 1 Score: 177 bits (449), Expect = 3.120e-50
Identity = 110/285 (38.60%), Postives = 165/285 (57.89%), Query Frame = 1
Query:   10 PHSKILPRNMLGSRLLPLVIAVNVYLASLAILGGLALIGATGQWATELDQLVTVQVPPESGVSGDAVVKSVLGVLRDHPSVAQARALELSEMEALLAPWLGQSAAIKDLPLPQLVDVELRPDGDLD--SLRKRLDAEFPGVEIDDHRQWREQMQSIATSARLICWSLVAMISLAAIAVIIFATRASLENQNELVALMHLIGAHNSFVAGEFQKHFLGIGVIGVLIGLVPVVLTIGAVLYLTGDDPAPWMGRMTLGPVDYILAALPPLTAALITMLTARLTVLRAL 858
            P S I+P   +    L LV+A   YLA LA    + +  +   W  +L+  +T+QV P + ++ +  + + L VL +   + +A AL   ++ ALL PWLG++   +DLPLP L+DVEL PD ++D   L +RL A  PG+E+D HRQW  ++ S A SA  +   ++ +I+L  +A+++FATRASL   +E V ++HL+GA + FVA E Q+HFL +G+ G   GL   +LT  A+ +L  +  A  +    L   DY    L P   AL T L AR+TVLR L
Sbjct:   27 PRSGIMPPADVTGATLVLVVAAMSYLACLAFGAMVTVTRSANDWTAQLEGSLTIQVKPHAEIATEDQISAALAVLDEVDGIERASALSEEDIRALLDPWLGETTESEDLPLPSLIDVELSPDANVDMSGLAERLAAAAPGIELDTHRQWLGELLSAARSAVWLSIGILTLITLTTVAIVVFATRASLAANHESVEVLHLVGAPDEFVANEVQRHFLQLGLRGGASGLAAAILTFLAITWLGSEGGAFLLPVPGLMLSDYPWLLLVPAVVALTTTLAARMTVLRVL 311          
BLAST of mRNA_P-wetherbeei_contig12367.2.1 vs. uniprot
Match: A0A2A5EN56_9HYPH (Uncharacterized protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5EN56_9HYPH)

HSP 1 Score: 176 bits (445), Expect = 1.520e-49
Identity = 112/289 (38.75%), Postives = 171/289 (59.17%), Query Frame = 1
Query:   10 PHSKILPRNMLGSRLLPLVIAVNVYLASLAILGGLALIGATGQWATELDQLVTVQVPPESGVSGDAVVKSVLGVLRDHPSVAQARALELSEMEALLAPWLGQSAAIKDLPLPQLVDVELRPDGDLDSLR--KRLDAEFPGVEIDDHRQWREQMQSIATSARLICWSLVAMISLAAIAVIIFATRASLENQNELVALMHLIGAHNSFVAGEFQKHFLGIGVIGVLIGLVPVVLTIGAVLYLTGDDPA---PWMGRMTLGPVDYILAALPPLTAALITMLTARLTVLRALA 861
            P   I+P   +    L LV+A   YLA LA+   + +  +   W+T+L+  +T+QV P++ ++ +  V + L +L   P +A A+AL  +++ ALL PWLG++   +DLPLP L+DV+L PD  +D  R   RL A  PG+E+D HRQW  ++ + A SA  +   ++ +I++   A+++FAT+ASL   +E V ++HL+GAH+ FVA E Q+HFL +G+ G   GL    LT   + +L  +  A   P  G +TLG  DY    + P   AL T L AR+TVLR LA
Sbjct:   35 PKIGIMPPADITGATLVLVVAAMCYLACLALGAMVTVTRSASDWSTQLEGSLTIQVKPQNDIATEDQVSAALAILDGTPGIASAQALSDTDVRALLDPWLGEAQTGEDLPLPSLIDVKLVPDVQIDMARLATRLAAAAPGIELDTHRQWLGELLNAARSATWLSIGILVLIAMTTGAIVVFATQASLAANHETVEVLHLVGAHDEFVANEIQRHFLQLGLRGGASGLGAATLTFLLISWLGSEGSAFLLPVPG-LTLG--DYPWLLIVPAAIALTTTLAARITVLRVLA 320          
BLAST of mRNA_P-wetherbeei_contig12367.2.1 vs. uniprot
Match: A0A836TS12_9PROT (Uncharacterized protein n=1 Tax=Sneathiellales bacterium TaxID=2528251 RepID=A0A836TS12_9PROT)

HSP 1 Score: 173 bits (439), Expect = 5.050e-49
Identity = 103/285 (36.14%), Postives = 164/285 (57.54%), Query Frame = 1
Query:   13 HSKILPRNMLGSRLLPLVIAVNVYLASLAILGGLALIGATGQWATELDQLVTVQVPPESGVSGDAVVKSVLGVLRDHPSVAQARALELSEMEALLAPWLGQSAAIKDLPLPQLVDVELRPDGDLD--SLRKRLDAEFPGVEIDDHRQWREQMQSIATSARLICWSLVAMISLAAIAVIIFATRASLENQNELVALMHLIGAHNSFVAGEFQKHFLGIGVIGVLIGLVPVVLTIGAVLYLTGDDPAPWMGRMTLGPVDYILAALPPLTAALITMLTARLTVLRALA 861
               +LP +    + LP VIAV VYLA+LA   GL +  + GQW  +L +  TVQ+      S    V++ L VLR  P V +A AL   ++ ALL PWLG      DLP+P L++V L P+  +D  +L  +L    P   +D H  W +++ ++A + + I   +V +I+LA +A+++FATRA L    ++V ++HLIG  ++F+AG FQ HFL + + G ++GL     TI  +   T +    ++ ++ + P + ++    PL AAL  M+TAR+TV+R+LA
Sbjct:    4 RKNLLPDHRASGQYLPWVIAVMVYLATLAASAGLTVNKSLGQWRDDLTRNATVQIASARPDSVAQQVEAALKVLRAAPGVEKAEALSRGDLVALLEPWLGSGNVSNDLPMPSLIEVTLAPEPAVDFKALVSKLAKVAPDARMDTHESWIDRLITLARTVQAIAIGIVVLIALATVAIVVFATRAGLAADQQVVEVLHLIGGQDTFIAGRFQSHFLRLALRGGIVGLAAAATTIVMLARFTSELGGSFVPKVHISPFEILILLAVPLAAALTKMITARITVMRSLA 288          
BLAST of mRNA_P-wetherbeei_contig12367.2.1 vs. uniprot
Match: A0A6N7FDA2_9PROT (Cell division protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FDA2_9PROT)

HSP 1 Score: 173 bits (439), Expect = 5.640e-49
Identity = 111/291 (38.14%), Postives = 172/291 (59.11%), Query Frame = 1
Query:    7 IPHSKILPRNM-LGSRLLPLVIAVNVYLASLAILGGLALIGATGQWATELDQLVTVQVPPESGVSGDAV---VKSVLGVLRDHPSVAQARALELSEMEALLAPWLGQSAAIKDLPLPQLVDVELRPDGDLDS--LRKRLDAEFPGVEIDDHRQWREQMQSIATSARLICWSLVAMISLAAIAVIIFATRASLENQNELVALMHLIGAHNSFVAGEFQKHFLGIGVIGVLIGLVPVVLTIGAVLYLTGDDPAPWMGRMTLGPVDYILAALPPLTAALITMLTARLTVLRALA 861
            I H  ILP +    SR LP +IA  V+LA LA+ G + +   +  W   +   +T+QV P +  S +A+   +   L +LR+ P VA+A A+      ALL PWLG+SA +++LP+P+++DV L     +D+  L  R+ A+ PG  ++DH  W   + ++A + + I +++V +I+LAA+A ++FAT+  L   +E+V L+HLIGA + FVA EFQ H   +G+ G + G V V  T+  V+YL G   A  +  + LG   +   A   +  ALI M+TARLTV+RALA
Sbjct:    2 IGHRAILPLSRDPASRFLPWLIAFMVWLAGLALAGAMQIQTTSDAWVKGVAGRLTMQVVPAADESAEALEARIGRALALLRETPGVARAEAMPKEAAAALLEPWLGKSALVEELPVPRMIDVVLEDGAPMDTRALGARIAAQVPGTSLEDHGLWLANLVTLAGAIQAIAFAIVGLIALAAVATVVFATKTGLAIHHEVVELLHLIGARDGFVAREFQGHAFRLGLKGGVGGFVLVAATVAVVVYLAGRVEAGLLPPIALGLAQWAALAGLAIAVALIAMITARLTVMRALA 292          
BLAST of mRNA_P-wetherbeei_contig12367.2.1 vs. uniprot
Match: A0A523FGE9_9PROT (Cell division protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523FGE9_9PROT)

HSP 1 Score: 171 bits (434), Expect = 3.890e-48
Identity = 115/297 (38.72%), Postives = 168/297 (56.57%), Query Frame = 1
Query:   10 PHSKILPRNMLGSRLLPLVIAVNVYLASLAILGGLALIGATGQWATELDQLVTVQVPP------ESGVSG-----DAVVKSVLGVLRDHPSVAQARALELSEMEALLAPWLGQSAAIKDLPLPQLVDVELRPDG--DLDSLRKRLDAEFPGVEIDDHRQWREQMQSIATSARLICWSLVAMISLAAIAVIIFATRASLENQNELVALMHLIGAHNSFVAGEFQKHFLGIGVIGVLIGLVPVVLTIGAVLYLTGDDPAPWMGRMTLGPVDYILAALPPLTAALITMLTARLTVLRALA 861
            P S +   +   +R LP +I + VYLA+LA+ G + L  A   W   L   +TVQ+PP      + GVS      +A V   L VLR  P VAQA+AL   E+ ALL PWLG     ++L LP L+DV+L+      L+ L   LDA  PG  IDDH++W  ++  +  S  LI   +V ++SLAAIA +IF TR  L   ++++ L+H++GAH++++A +FQ   L +GV G  IG      T+ A+ YL+    A  +  + L    ++  +  P   ALI+M+TAR+TVLRALA
Sbjct:    4 PRSDLPLEHDAANRFLPWLIVLIVYLAALALAGLMVLSTAASGWGRGLTDTLTVQIPPAASMASKDGVSDANSAPEARVDRALEVLRATPGVAQAKALSREELLALLEPWLGSGQFTEELSLPALIDVKLKAHSGVSLEGLAATLDAAVPGATIDDHKRWFGRLILLVRSVELIAGGIVLLVSLAAIATVIFVTRTGLAIHHDVIELLHVMGAHDAYIARQFQFQALDMGVRGGAIGFALAASTLLALGYLSARIEAMLLPSLELSVYQWLALSSLPFVVALISMITARVTVLRALA 300          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12367.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TXH7_9PROT9.060e-13971.33Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A353LMP7_9PROT2.230e-7044.33Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A7Y4T822_9PROT1.430e-5237.76ABC transporter permease n=1 Tax=Alphaproteobacter... [more]
UPI0004AE71806.830e-5138.72FtsX-like permease family protein n=1 Tax=Rhodovib... [more]
A0A512E0H0_9PROT8.620e-5140.43Cell division protein n=1 Tax=Skermanella aerolata... [more]
A0A2Z4UMW2_9HYPH3.120e-5038.60Cell division ABC transporter subunit FtsX n=2 Tax... [more]
A0A2A5EN56_9HYPH1.520e-4938.75Uncharacterized protein n=1 Tax=Rhodobiaceae bacte... [more]
A0A836TS12_9PROT5.050e-4936.14Uncharacterized protein n=1 Tax=Sneathiellales bac... [more]
A0A6N7FDA2_9PROT5.640e-4938.14Cell division protein n=1 Tax=Alphaproteobacteria ... [more]
A0A523FGE9_9PROT3.890e-4838.72Cell division protein n=1 Tax=Alphaproteobacteria ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12367contigP-wetherbeei_contig12367:719..1591 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1089552.KI911559_gene555
Model size873
Max annot lvl204441|Rhodospirillales
KEGG koko:K09811
KEGG TC3.A.1.140
KEGG Pathwayko02010,map02010
KEGG ModuleM00256
Hectar predicted targeting categorysignal anchor
Exons1
Evalue2.23e-51
EggNOG OGsCOG2177@1|root,COG2177@2|Bacteria,1MXKQ@1224|Proteobacteria,2TSNT@28211|Alphaproteobacteria,2JS4N@204441|Rhodospirillales
DescriptionCell division protein
Cds size873
COG categoryD
BRITEko00000,ko00001,ko00002,ko02000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185946.920034-CDS-P-wetherbeei_contig12367:718..15911683185946.920034-CDS-P-wetherbeei_contig12367:718..1591Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12367 719..1591 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12367.2.1prot_P-wetherbeei_contig12367.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12367 719..1591 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12367.2.1

>prot_P-wetherbeei_contig12367.2.1 ID=prot_P-wetherbeei_contig12367.2.1|Name=mRNA_P-wetherbeei_contig12367.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=291bp
MIIPHSKILPRNMLGSRLLPLVIAVNVYLASLAILGGLALIGATGQWATE
LDQLVTVQVPPESGVSGDAVVKSVLGVLRDHPSVAQARALELSEMEALLA
PWLGQSAAIKDLPLPQLVDVELRPDGDLDSLRKRLDAEFPGVEIDDHRQW
REQMQSIATSARLICWSLVAMISLAAIAVIIFATRASLENQNELVALMHL
IGAHNSFVAGEFQKHFLGIGVIGVLIGLVPVVLTIGAVLYLTGDDPAPWM
GRMTLGPVDYILAALPPLTAALITMLTARLTVLRALAVLD*
back to top

mRNA from alignment at P-wetherbeei_contig12367:719..1591+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12367.2.1 ID=mRNA_P-wetherbeei_contig12367.2.1|Name=mRNA_P-wetherbeei_contig12367.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=873bp|location=Sequence derived from alignment at P-wetherbeei_contig12367:719..1591+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATTATTCCCCATTCAAAAATTCTGCCCCGCAATATGCTGGGATCACG CCTGTTGCCATTGGTCATTGCTGTCAATGTCTATTTGGCCAGCCTGGCCA TATTGGGTGGATTGGCGCTGATTGGGGCCACCGGCCAGTGGGCGACGGAA CTTGATCAGCTTGTGACGGTTCAGGTTCCCCCTGAGTCCGGCGTCAGTGG CGATGCGGTGGTAAAATCCGTTCTTGGCGTATTGCGCGATCATCCCAGCG TCGCACAGGCGCGCGCGCTGGAACTGTCCGAGATGGAAGCACTGCTTGCG CCCTGGCTGGGACAAAGCGCCGCAATCAAGGATCTGCCCCTGCCACAGCT GGTTGATGTCGAACTGCGCCCGGACGGCGATCTGGATAGTCTGCGCAAGC GGCTGGATGCAGAGTTTCCTGGCGTTGAAATTGATGATCACCGGCAATGG CGCGAACAGATGCAATCGATTGCGACAAGTGCGCGGCTGATCTGCTGGTC CCTTGTCGCCATGATCTCTCTGGCGGCCATTGCCGTGATAATCTTTGCCA CAAGAGCCAGCCTGGAGAACCAGAACGAACTGGTTGCGCTGATGCATCTG ATCGGCGCGCACAACAGTTTTGTCGCCGGGGAGTTCCAGAAACATTTTTT GGGCATTGGCGTCATTGGCGTGCTTATCGGCCTTGTTCCGGTTGTCCTGA CGATTGGCGCGGTCCTGTATCTCACCGGCGATGATCCGGCCCCCTGGATG GGACGAATGACACTGGGGCCCGTTGATTATATACTTGCCGCATTGCCACC CTTAACGGCTGCGCTGATCACCATGCTGACAGCCCGCCTGACTGTGCTGC GCGCGCTCGCGGTTCTGGATTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig12367:719..1591+

>mRNA_P-wetherbeei_contig12367.2.1 ID=mRNA_P-wetherbeei_contig12367.2.1|Name=mRNA_P-wetherbeei_contig12367.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=873bp|location=Sequence derived from alignment at P-wetherbeei_contig12367:719..1591+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATTATTCCCCATTCAAAAATTCTGCCCCGCAATATGCTGGGATCACG
CCTGTTGCCATTGGTCATTGCTGTCAATGTCTATTTGGCCAGCCTGGCCA
TATTGGGTGGATTGGCGCTGATTGGGGCCACCGGCCAGTGGGCGACGGAA
CTTGATCAGCTTGTGACGGTTCAGGTTCCCCCTGAGTCCGGCGTCAGTGG
CGATGCGGTGGTAAAATCCGTTCTTGGCGTATTGCGCGATCATCCCAGCG
TCGCACAGGCGCGCGCGCTGGAACTGTCCGAGATGGAAGCACTGCTTGCG
CCCTGGCTGGGACAAAGCGCCGCAATCAAGGATCTGCCCCTGCCACAGCT
GGTTGATGTCGAACTGCGCCCGGACGGCGATCTGGATAGTCTGCGCAAGC
GGCTGGATGCAGAGTTTCCTGGCGTTGAAATTGATGATCACCGGCAATGG
CGCGAACAGATGCAATCGATTGCGACAAGTGCGCGGCTGATCTGCTGGTC
CCTTGTCGCCATGATCTCTCTGGCGGCCATTGCCGTGATAATCTTTGCCA
CAAGAGCCAGCCTGGAGAACCAGAACGAACTGGTTGCGCTGATGCATCTG
ATCGGCGCGCACAACAGTTTTGTCGCCGGGGAGTTCCAGAAACATTTTTT
GGGCATTGGCGTCATTGGCGTGCTTATCGGCCTTGTTCCGGTTGTCCTGA
CGATTGGCGCGGTCCTGTATCTCACCGGCGATGATCCGGCCCCCTGGATG
GGACGAATGACACTGGGGCCCGTTGATTATATACTTGCCGCATTGCCACC
CTTAACGGCTGCGCTGATCACCATGCTGACAGCCCGCCTGACTGTGCTGC
GCGCGCTCGCGGTTCTGGATTGA
back to top