mRNA_P-wetherbeei_contig5270.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5270.1.1
Unique NamemRNA_P-wetherbeei_contig5270.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5270.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5270contigP-wetherbeei_contig5270:2..2259 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size2260
Hectar predicted targeting categoryother localisation
Exons1
Ec32 ortholog descriptionGlycosyltransferase, family GT47
Ec32 orthologEc-07_000650.3
Cds size2256
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186789.7237046-CDS-P-wetherbeei_contig5270:3..22591683186789.7237046-CDS-P-wetherbeei_contig5270:3..2259Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5270 4..2259 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5270.1.1prot_P-wetherbeei_contig5270.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5270 4..2259 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5270.1.1

>prot_P-wetherbeei_contig5270.1.1 ID=prot_P-wetherbeei_contig5270.1.1|Name=mRNA_P-wetherbeei_contig5270.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=752bp
ESVEAAGAGFDGGGGGGTGSVAAGAGDQCFDAPRCGIGGGVEASSAAGGK
AAPRLSVYIYDAYVSLRNSSVLLAATGKAARLEDEDPAGAAAAPPGLVDD
SGPWRREAQRLGILAELPAEACMLLYVLPMEVESHLADLTAQGLGCGVDG
GFGANSFGGGSGGGGSGGGLSGGRFGLGFGAGGSSRGGPSGGNRGGCLHE
APTWNGGANHVIVSEAGVPVYVLSRWFGRAALATAHPLACAHRPGFDVSL
PPPAPRNPGLYAALGAAALAAAEATETAAVTAAKSMAEAKAAAEQQVAVV
AAETAAAEKAAAEKAATEQQAASEIEAAEKAAAEQLVASEVAVEEAAAEQ
QAAVEQVAAEKAAVEQVAAEKAAAEQQAVAALTAAEQQAAAAQAAAEQQD
PMEQENAAGQQAAAKATEAAAVGAAERAAVAGAVVATTGGVTAEAAPGKA
FFVETVPAYAAPAEAVAVDTATAEAVPAEAAPVDAAAARAAQAGAAPAEA
APAEAAPADAALVDTAPTEAAPVEAAVAEATPAKAVPVEAAPAGAVLAEV
PPADAAPVDRVPVEAAPGEAAPGDAKAVPTEATPVLLGVEGAEAAGLRGP
ADTAADVRPEELVAQAVVSPVGAADAAADADDEDAAAADAATAAAMMPAV
FGGPEPHFGVAAADFAAAAAAGAVTPPGQHRRLDAVSPEQQALAGAEAEV
AAAAAVAAAVAAAEPRRYFAAFGGIFPVGGFATGYLPGTHRGRLWSLNND
GD
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mRNA from alignment at P-wetherbeei_contig5270:2..2259-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5270.1.1 ID=mRNA_P-wetherbeei_contig5270.1.1|Name=mRNA_P-wetherbeei_contig5270.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2258bp|location=Sequence derived from alignment at P-wetherbeei_contig5270:2..2259- (Phaeothamnion wetherbeei SAG_119_79)
GAGAGTGTCGAAGCGGCCGGCGCGGGTTTCGACGGCGGGGGGGGCGGCGG
CACCGGCAGCGTTGCGGCGGGAGCGGGAGACCAGTGCTTCGACGCGCCCC
GCTGCGGCATCGGCGGCGGGGTGGAGGCCAGTTCTGCGGCGGGGGGTAAG
GCGGCGCCGCGACTGTCAGTATACATCTACGACGCGTACGTCTCGCTGCG
CAACAGCAGCGTGCTCCTGGCGGCGACGGGCAAGGCGGCGCGGTTGGAGG
ACGAAGATCCTGCCGGGGCGGCGGCGGCACCACCGGGGTTGGTCGACGAC
AGTGGCCCGTGGCGGCGCGAGGCGCAGCGGCTGGGCATCCTCGCCGAGTT
GCCGGCCGAGGCGTGCATGCTTTTATACGTCCTCCCGATGGAGGTCGAGT
CGCACCTGGCGGACCTGACGGCGCAGGGCCTCGGCTGCGGGGTCGACGGT
GGCTTTGGCGCCAACAGTTTCGGCGGCGGATCCGGCGGTGGCGGCTCTGG
CGGCGGTCTCAGCGGCGGCCGGTTTGGCCTCGGTTTTGGCGCCGGCGGCT
CCAGCCGCGGTGGTCCCAGCGGCGGGAACCGTGGCGGCTGCTTGCACGAG
GCGCCGACGTGGAACGGCGGCGCGAACCACGTCATAGTGTCGGAGGCGGG
CGTGCCGGTCTACGTGCTGTCGCGGTGGTTCGGCCGCGCGGCGCTGGCGA
CGGCGCATCCGTTGGCTTGCGCCCACCGGCCCGGTTTTGACGTCAGCCTC
CCACCGCCGGCGCCGCGGAATCCCGGCTTGTACGCTGCCTTGGGGGCGGC
GGCGCTGGCGGCGGCGGAAGCCACGGAGACGGCCGCGGTGACGGCCGCCA
AGTCGATGGCAGAGGCAAAGGCAGCGGCCGAGCAGCAAGTGGCGGTGGTA
GCGGCAGAGACAGCTGCGGCGGAGAAGGCTGCGGCGGAGAAGGCCGCAAC
GGAGCAGCAGGCGGCATCGGAGATCGAAGCTGCGGAAAAGGCGGCAGCAG
AGCAACTGGTGGCATCCGAAGTGGCTGTAGAAGAGGCCGCCGCGGAGCAA
CAGGCGGCGGTGGAGCAGGTAGCTGCGGAAAAGGCGGCGGTGGAGCAGGT
AGCTGCGGAAAAGGCCGCGGCGGAGCAGCAAGCGGTAGCAGCTCTGACAG
CTGCGGAACAGCAAGCCGCGGCAGCTCAGGCAGCTGCGGAGCAGCAGGAT
CCAATGGAGCAGGAAAACGCCGCGGGGCAGCAGGCAGCCGCGAAAGCTAC
GGAAGCGGCAGCCGTGGGTGCCGCGGAGCGGGCAGCGGTGGCAGGAGCAG
TCGTGGCAACCACGGGAGGTGTTACAGCAGAAGCGGCACCTGGAAAAGCT
TTTTTCGTGGAAACGGTACCGGCATACGCGGCGCCGGCAGAGGCGGTCGC
TGTAGACACGGCGACTGCAGAAGCGGTGCCGGCAGAAGCAGCGCCGGTAG
ACGCGGCGGCTGCACGAGCGGCGCAAGCAGGAGCGGCGCCAGCAGAAGCC
GCTCCGGCAGAAGCCGCTCCGGCAGACGCAGCACTGGTAGACACTGCGCC
GACAGAAGCGGCGCCGGTGGAGGCAGCGGTTGCAGAAGCGACGCCGGCAA
AAGCGGTGCCGGTAGAAGCTGCGCCAGCAGGAGCGGTGCTGGCAGAAGTC
CCTCCGGCAGATGCAGCGCCGGTAGACAGAGTGCCCGTAGAAGCGGCGCC
AGGAGAGGCTGCGCCGGGGGATGCTAAGGCCGTACCGACCGAAGCAACGC
CGGTATTATTGGGTGTCGAGGGCGCGGAGGCAGCCGGCTTGCGGGGGCCG
GCTGATACAGCAGCAGACGTCAGGCCAGAGGAACTGGTTGCCCAAGCGGT
CGTCAGTCCGGTGGGTGCGGCCGACGCGGCGGCGGACGCAGATGACGAGG
ACGCCGCCGCCGCAGACGCGGCGACCGCGGCAGCGATGATGCCAGCGGTG
TTCGGGGGCCCTGAGCCGCATTTCGGAGTGGCGGCAGCGGACTTTGCGGC
GGCGGCGGCGGCAGGGGCCGTCACGCCGCCAGGTCAGCACAGGAGACTTG
ACGCCGTCAGCCCCGAGCAGCAGGCGCTGGCAGGGGCCGAGGCAGAAGTG
GCGGCGGCAGCCGCGGTGGCGGCGGCGGTGGCGGCGGCGGAGCCTCGGCG
CTACTTTGCGGCCTTTGGCGGCATCTTCCCGGTGGGCGGCTTCGCCACAG
GCTACCTCCCGGGCACGCACCGCGGGAGGCTCTGGTCGCTCAACAACGAC
GGGGACGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5270:2..2259-

>mRNA_P-wetherbeei_contig5270.1.1 ID=mRNA_P-wetherbeei_contig5270.1.1|Name=mRNA_P-wetherbeei_contig5270.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2256bp|location=Sequence derived from alignment at P-wetherbeei_contig5270:2..2259- (Phaeothamnion wetherbeei SAG_119_79)
GAGAGTGTCGAAGCGGCCGGCGCGGGTTTCGACGGCGGGGGGGGCGGCGG
CACCGGCAGCGTTGCGGCGGGAGCGGGAGACCAGTGCTTCGACGCGCCCC
GCTGCGGCATCGGCGGCGGGGTGGAGGCCAGTTCTGCGGCGGGGGGTAAG
GCGGCGCCGCGACTGTCAGTATACATCTACGACGCGTACGTCTCGCTGCG
CAACAGCAGCGTGCTCCTGGCGGCGACGGGCAAGGCGGCGCGGTTGGAGG
ACGAAGATCCTGCCGGGGCGGCGGCGGCACCACCGGGGTTGGTCGACGAC
AGTGGCCCGTGGCGGCGCGAGGCGCAGCGGCTGGGCATCCTCGCCGAGTT
GCCGGCCGAGGCGTGCATGCTTTTATACGTCCTCCCGATGGAGGTCGAGT
CGCACCTGGCGGACCTGACGGCGCAGGGCCTCGGCTGCGGGGTCGACGGT
GGCTTTGGCGCCAACAGTTTCGGCGGCGGATCCGGCGGTGGCGGCTCTGG
CGGCGGTCTCAGCGGCGGCCGGTTTGGCCTCGGTTTTGGCGCCGGCGGCT
CCAGCCGCGGTGGTCCCAGCGGCGGGAACCGTGGCGGCTGCTTGCACGAG
GCGCCGACGTGGAACGGCGGCGCGAACCACGTCATAGTGTCGGAGGCGGG
CGTGCCGGTCTACGTGCTGTCGCGGTGGTTCGGCCGCGCGGCGCTGGCGA
CGGCGCATCCGTTGGCTTGCGCCCACCGGCCCGGTTTTGACGTCAGCCTC
CCACCGCCGGCGCCGCGGAATCCCGGCTTGTACGCTGCCTTGGGGGCGGC
GGCGCTGGCGGCGGCGGAAGCCACGGAGACGGCCGCGGTGACGGCCGCCA
AGTCGATGGCAGAGGCAAAGGCAGCGGCCGAGCAGCAAGTGGCGGTGGTA
GCGGCAGAGACAGCTGCGGCGGAGAAGGCTGCGGCGGAGAAGGCCGCAAC
GGAGCAGCAGGCGGCATCGGAGATCGAAGCTGCGGAAAAGGCGGCAGCAG
AGCAACTGGTGGCATCCGAAGTGGCTGTAGAAGAGGCCGCCGCGGAGCAA
CAGGCGGCGGTGGAGCAGGTAGCTGCGGAAAAGGCGGCGGTGGAGCAGGT
AGCTGCGGAAAAGGCCGCGGCGGAGCAGCAAGCGGTAGCAGCTCTGACAG
CTGCGGAACAGCAAGCCGCGGCAGCTCAGGCAGCTGCGGAGCAGCAGGAT
CCAATGGAGCAGGAAAACGCCGCGGGGCAGCAGGCAGCCGCGAAAGCTAC
GGAAGCGGCAGCCGTGGGTGCCGCGGAGCGGGCAGCGGTGGCAGGAGCAG
TCGTGGCAACCACGGGAGGTGTTACAGCAGAAGCGGCACCTGGAAAAGCT
TTTTTCGTGGAAACGGTACCGGCATACGCGGCGCCGGCAGAGGCGGTCGC
TGTAGACACGGCGACTGCAGAAGCGGTGCCGGCAGAAGCAGCGCCGGTAG
ACGCGGCGGCTGCACGAGCGGCGCAAGCAGGAGCGGCGCCAGCAGAAGCC
GCTCCGGCAGAAGCCGCTCCGGCAGACGCAGCACTGGTAGACACTGCGCC
GACAGAAGCGGCGCCGGTGGAGGCAGCGGTTGCAGAAGCGACGCCGGCAA
AAGCGGTGCCGGTAGAAGCTGCGCCAGCAGGAGCGGTGCTGGCAGAAGTC
CCTCCGGCAGATGCAGCGCCGGTAGACAGAGTGCCCGTAGAAGCGGCGCC
AGGAGAGGCTGCGCCGGGGGATGCTAAGGCCGTACCGACCGAAGCAACGC
CGGTATTATTGGGTGTCGAGGGCGCGGAGGCAGCCGGCTTGCGGGGGCCG
GCTGATACAGCAGCAGACGTCAGGCCAGAGGAACTGGTTGCCCAAGCGGT
CGTCAGTCCGGTGGGTGCGGCCGACGCGGCGGCGGACGCAGATGACGAGG
ACGCCGCCGCCGCAGACGCGGCGACCGCGGCAGCGATGATGCCAGCGGTG
TTCGGGGGCCCTGAGCCGCATTTCGGAGTGGCGGCAGCGGACTTTGCGGC
GGCGGCGGCGGCAGGGGCCGTCACGCCGCCAGGTCAGCACAGGAGACTTG
ACGCCGTCAGCCCCGAGCAGCAGGCGCTGGCAGGGGCCGAGGCAGAAGTG
GCGGCGGCAGCCGCGGTGGCGGCGGCGGTGGCGGCGGCGGAGCCTCGGCG
CTACTTTGCGGCCTTTGGCGGCATCTTCCCGGTGGGCGGCTTCGCCACAG
GCTACCTCCCGGGCACGCACCGCGGGAGGCTCTGGTCGCTCAACAACGAC
GGGGAC
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