mRNA_P-wetherbeei_contig52652.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52652.1.1 vs. uniprot
Match: A0A258DDX0_CAUVI (TonB-dependent receptor n=1 Tax=Caulobacter vibrioides TaxID=155892 RepID=A0A258DDX0_CAUVI) HSP 1 Score: 236 bits (601), Expect = 4.600e-70 Identity = 110/180 (61.11%), Postives = 143/180 (79.44%), Query Frame = 1
Query: 1 ISMNGSPQDVFGGKDGYGRPVEAIDGTNLRGRDRYSVAILSQLAVEYRGQFLDDKVLVSIGVRAPFFKRELNQLCYSQNGSSNVLCTTQTPNAPLANGNVTFGASATQYIPPYATTKEYEDVLPNVGVSWNFAENQFVYASYAEGLSAPRTDNLYTPLRLASGAIVLPGAEPETTKTFDL 540
++ +G+ +VFGGKDG+G V DG+ LR RDR+S+A L+Q+A EYRG+F+ +++ V G+RAP+FKRELNQ CYSQ+GSSNV CTT+ PNA LANGNVTF S+TQYI PY T K+Y+DVLPN+G ++ A++ +VYASYAEGLSAPRTD+LYT RLA G + PG EPETT+ FD+
Sbjct: 416 LNADGTTTNVFGGKDGHGEKVFGSDGSFLRARDRFSIANLNQVAFEYRGEFMQERLTVVAGLRAPYFKRELNQYCYSQDGSSNVRCTTEAPNATLANGNVTFAGSSTQYIKPYTTEKKYDDVLPNIGANFKVADHHYVYASYAEGLSAPRTDSLYTVKRLADGTVANPGVEPETTQAFDI 595
BLAST of mRNA_P-wetherbeei_contig52652.1.1 vs. uniprot
Match: A0A290N1K3_CAUVI (TonB-dependent receptor n=1 Tax=Caulobacter vibrioides TaxID=155892 RepID=A0A290N1K3_CAUVI) HSP 1 Score: 234 bits (598), Expect = 1.410e-69 Identity = 109/180 (60.56%), Postives = 143/180 (79.44%), Query Frame = 1
Query: 1 ISMNGSPQDVFGGKDGYGRPVEAIDGTNLRGRDRYSVAILSQLAVEYRGQFLDDKVLVSIGVRAPFFKRELNQLCYSQNGSSNVLCTTQTPNAPLANGNVTFGASATQYIPPYATTKEYEDVLPNVGVSWNFAENQFVYASYAEGLSAPRTDNLYTPLRLASGAIVLPGAEPETTKTFDL 540
++ +G+ +VFGGKDG+G V DG+ LRGRDR S A L+Q+A EYRG++ DDK+ V G+R P+FKRELNQ CYSQ+GSSNV CT++ PNA LANGNVTF S TQ+I PY TK+Y+DVLPN+G+++ A+ Q++Y SYAEGLSAPRTD+LYT RLA+G++V PG +PETT+ FD+
Sbjct: 428 LNADGTTTNVFGGKDGHGAKVFGSDGSFLRGRDRLSKAFLNQVAFEYRGEYFDDKLTVVAGLRMPYFKRELNQFCYSQDGSSNVRCTSEAPNATLANGNVTFAGSTTQFIKPYEATKKYDDVLPNIGLNYQLADRQYLYGSYAEGLSAPRTDSLYTVKRLANGSVVNPGVQPETTQAFDI 607
BLAST of mRNA_P-wetherbeei_contig52652.1.1 vs. uniprot
Match: A0A2R7LI08_9CAUL (TonB-dependent receptor n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A2R7LI08_9CAUL) HSP 1 Score: 234 bits (598), Expect = 1.490e-69 Identity = 112/180 (62.22%), Postives = 143/180 (79.44%), Query Frame = 1
Query: 1 ISMNGSPQDVFGGKDGYGRPVEAIDGTNLRGRDRYSVAILSQLAVEYRGQFLDDKVLVSIGVRAPFFKRELNQLCYSQNGSSNVLCTTQTPNAPLANGNVTFGASATQYIPPYATTKEYEDVLPNVGVSWNFAENQFVYASYAEGLSAPRTDNLYTPLRLASGAIVLPGAEPETTKTFDL 540
+ +G+ +VFGGKDG G+ V DG+ LR RDR+S+A L+Q++VEYRG+FL+DK+ V GVRAPFFKRELNQ CYSQ+GSSNV CTT+ P A LANGNVTFG S TQ+I PY+T K+Y+ VLPN+GV++ A++ +VYASYAEGLSAPRTD+LYT RLA ++ PG +PETTK D+
Sbjct: 430 LKADGTTTNVFGGKDGNGQKVFGSDGSFLRNRDRFSIANLNQISVEYRGEFLEDKLTVVAGVRAPFFKRELNQYCYSQDGSSNVRCTTEAPTATLANGNVTFGTSTTQFIKPYSTEKKYDAVLPNIGVNYELAKSHYVYASYAEGLSAPRTDSLYTVKRLADNSVANPGVQPETTKAVDV 609
BLAST of mRNA_P-wetherbeei_contig52652.1.1 vs. uniprot
Match: A0A3Q9IJS5_9CAUL (TonB-dependent receptor n=2 Tax=Caulobacter TaxID=75 RepID=A0A3Q9IJS5_9CAUL) HSP 1 Score: 227 bits (578), Expect = 1.720e-66 Identity = 109/180 (60.56%), Postives = 141/180 (78.33%), Query Frame = 1
Query: 1 ISMNGSPQDVFGGKDGYGRPVEAIDGTNLRGRDRYSVAILSQLAVEYRGQFLDDKVLVSIGVRAPFFKRELNQLCYSQNGSSNVLCTTQTPNAPLANGNVTFGASATQYIPPYATTKEYEDVLPNVGVSWNFAENQFVYASYAEGLSAPRTDNLYTPLRLASGAIVLPGAEPETTKTFDL 540
++ +G+ +VFGGKDG G+ V DG+ LRGRDR+S+A L+Q+A+EY+G+F+DDK+ +S GV + FKRELNQ CYSQ+GSSNV CTT+TPNA LANGNVTF S+TQYI PY K+Y+ VLPNVG+++ A N +VY SYAE LSAPRTD+LYT RLA G + PG +PETT+ FD+
Sbjct: 469 LNADGTTTNVFGGKDGNGQKVFGADGSFLRGRDRFSLANLNQVALEYQGKFMDDKLRLSAGVVSKNFKRELNQYCYSQDGSSNVRCTTETPNATLANGNVTFAGSSTQYIKPYTAEKKYDKVLPNVGLNYELAPNNYVYVSYAEALSAPRTDSLYTVKRLADGTVTNPGVQPETTQAFDV 648
BLAST of mRNA_P-wetherbeei_contig52652.1.1 vs. uniprot
Match: A0A2P2E9U5_9PROT (Ferric-pseudobactin 358 receptor n=1 Tax=Candidatus Phycosocius bacilliformis TaxID=1445552 RepID=A0A2P2E9U5_9PROT) HSP 1 Score: 226 bits (575), Expect = 4.170e-66 Identity = 111/181 (61.33%), Postives = 144/181 (79.56%), Query Frame = 1
Query: 1 ISMNGSPQDVFGGKDGYGRPVEAIDGTNLRGRDRYSVAILSQLAVEYRGQFLDDKVLVSIGVRAPFFKRELNQLCYSQNGSSNVLCTTQTPNAPLANGNVTFGAS-ATQYIPPYATTKEYEDVLPNVGVSWNFAENQFVYASYAEGLSAPRTDNLYTPLRLASGAIVLPGAEPETTKTFDL 540
+S NG+P +VFGG++G V DG+ LRGRDR+S+A L+Q+A++Y G F +DK+ V+IGVRAPFF+R+L+Q CYSQNG+SNVLCTT+TPNA LAN NVTF ++ +TQYI PY T++Y+ VLPN+ S+ F N VYASYAEG SAPRTDNLYTPLR +GAI+L A PETT++FD+
Sbjct: 450 LSANGNPLNVFGGREGP--KVFGADGSFLRGRDRFSIAQLNQIAIDYNGLFFEDKLRVNIGVRAPFFERQLDQRCYSQNGTSNVLCTTETPNATLANRNVTFASTGSTQYIAPYKATRKYDAVLPNISASYEFLPNNSVYASYAEGFSAPRTDNLYTPLRFVTGAILLNNAVPETTQSFDI 628
BLAST of mRNA_P-wetherbeei_contig52652.1.1 vs. uniprot
Match: A0A257HM11_9PROT (TonB-dependent receptor n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A257HM11_9PROT) HSP 1 Score: 224 bits (571), Expect = 1.640e-65 Identity = 110/181 (60.77%), Postives = 142/181 (78.45%), Query Frame = 1
Query: 1 ISMNGSPQDVFGGKDGYGRPVEAIDGTNLRGRDRYSVAILSQLAVEYRGQFLDDKVLVSIGVRAPFFKRELNQLCYSQNGSSNVLCTTQTPNAPLANGNVTFGASAT-QYIPPYATTKEYEDVLPNVGVSWNFAENQFVYASYAEGLSAPRTDNLYTPLRLASGAIVLPGAEPETTKTFDL 540
+ G+P +VFGG+DG V +DG+ LRGRDR+S+A L+Q A++Y G F +DK+ +++GVRAPFF+R+L+Q C+SQNGSSNVLCTT+TP+A LANGNVTF + T QYI PY T++Y+ VLPN+ S+ F EN VYASYAEG SAPRTDNLYTPLR A+G I+L A PETT++FDL
Sbjct: 455 LDAQGNPLNVFGGRDGP--KVNGVDGSFLRGRDRFSIAQLNQFAIDYNGLFFEDKLRLNVGVRAPFFERQLDQRCFSQNGSSNVLCTTETPSATLANGNVTFVSQGTNQYIAPYKATRKYDAVLPNISASYEFIENNSVYASYAEGFSAPRTDNLYTPLRGATGGILLNNAVPETTQSFDL 633
BLAST of mRNA_P-wetherbeei_contig52652.1.1 vs. uniprot
Match: A0A1I6TLV6_9CAUL (Iron complex outermembrane recepter protein n=2 Tax=Caulobacterales TaxID=204458 RepID=A0A1I6TLV6_9CAUL) HSP 1 Score: 218 bits (554), Expect = 3.850e-63 Identity = 109/172 (63.37%), Postives = 129/172 (75.00%), Query Frame = 1
Query: 25 DVFGGKDGYGRPVEAIDGTNLRGRDRYSVAILSQLAVEYRGQFLDDKVLVSIGVRAPFFKRELNQLCYSQNGSSNVLCTTQTPNAPLANGNVTF-GASATQYIPPYATTKEYEDVLPNVGVSWNFAENQFVYASYAEGLSAPRTDNLYTPLRLASGAIVLPGAEPETTKTFD 537
D FGG++ V +DG NL+ RDR S A L+Q + EYRGQF+DD + VS+GVRAPFFKRELNQ CYSQN SSNVLCT++ PNAPLANGNVTF G TQYI PY T EYED+LPNVG ++ F + VY SYAE LSAPRTD+LYT RLA G+I P +PE+T+TFD
Sbjct: 459 DWFGGRNDEANRVINLDGYNLQSRDRLSYATLNQFSFEYRGQFMDDALTVSLGVRAPFFKRELNQFCYSQNESSNVLCTSEVPNAPLANGNVTFPGRGTTQYIAPYERTLEYEDILPNVGATYRFGDGHSVYVSYAENLSAPRTDSLYTVARLADGSIGNPTVQPESTQTFD 630
BLAST of mRNA_P-wetherbeei_contig52652.1.1 vs. uniprot
Match: A0A3D2VY02_9PROT (TonB-dependent receptor n=1 Tax=Hyphomonadaceae bacterium TaxID=2026748 RepID=A0A3D2VY02_9PROT) HSP 1 Score: 217 bits (553), Expect = 5.230e-63 Identity = 108/183 (59.02%), Postives = 140/183 (76.50%), Query Frame = 1
Query: 1 ISMNGSPQDVFGGKDGYGRPVEAIDGT-NLRGRDRYSVAILSQLAVEYRGQFLDDKVLVSIGVRAPFFKRELNQLCYSQNGSSNVLCTTQTPNAPLANGNVTFGAS-ATQYIPPYATTKEYEDVLPNVGVSWNFAENQFVYASYAEGLSAPRTDNLYTPLRLASG-AIVLPGAEPETTKTFDL 540
+ +NG+P+D FGGKDGYGR VE + G NLRGR R+S A L+Q+A EYRG F DD G+RAP+F+REL+Q CYSQN SSNV CT +TP+A LANGNV F ++ ATQY+PP+A T E++D+LPNVG+SW +EN +YASYA+GLSAPRTDN+YT R A+ +I+ A+PETT +D+
Sbjct: 435 LDINGNPEDAFGGKDGYGRRVEGVAGAGNLRGRQRHSHANLNQVAAEYRGMFFDDAFTFVAGLRAPYFERELDQQCYSQNASSNVRCTHETPSAVLANGNVQFASTGATQYLPPFAATLEFDDLLPNVGLSWRLSENATLYASYAQGLSAPRTDNVYTVARGATPTSILFTSAQPETTDAYDI 617
BLAST of mRNA_P-wetherbeei_contig52652.1.1 vs. uniprot
Match: A0A318BCM7_9CAUL (TonB-dependent receptor n=1 Tax=Caulobacter sp. D5 TaxID=357400 RepID=A0A318BCM7_9CAUL) HSP 1 Score: 216 bits (550), Expect = 1.230e-62 Identity = 107/183 (58.47%), Postives = 139/183 (75.96%), Query Frame = 1
Query: 1 ISMNGSP--QDVFGGKDGYGRPVEAIDGTN-LRGRDRYSVAILSQLAVEYRGQFLDDKVLVSIGVRAPFFKRELNQLCYSQNGSSNVLCTTQTPNAPLANGNVTFGASAT-QYIPPYATTKEYEDVLPNVGVSWNFAENQFVYASYAEGLSAPRTDNLYTPLRLASGAIVLPGAEPETTKTFD 537
I +G+P Q FGGKDG+G + DG + +R RDR+S+A L+Q++VEYRG+FL+D + +S+G+RAPFFKRELNQ CYSQN SS V CTT+TP+ PLANGNVTF ++ T Q+I PY+ T +Y+DVLPNVGVS+ F + +Y SYAE S PRTDNLYT LR A+ AIV G +PET+ TF+
Sbjct: 435 IDFDGTPTYQSWFGGKDGHGDKIVTADGKSFMRARDRFSIATLNQVSVEYRGKFLEDNLNLSVGLRAPFFKRELNQFCYSQNASSTVRCTTETPSTPLANGNVTFASTGTTQFIAPYSRTLKYDDVLPNVGVSYRFGDASSIYGSYAESTSLPRTDNLYTVLRAANNAIVTTGVQPETSTTFE 617
BLAST of mRNA_P-wetherbeei_contig52652.1.1 vs. uniprot
Match: A0A0Q5UUF2_9CAUL (TonB-dependent receptor n=3 Tax=unclassified Brevundimonas TaxID=2622653 RepID=A0A0Q5UUF2_9CAUL) HSP 1 Score: 216 bits (549), Expect = 1.790e-62 Identity = 112/173 (64.74%), Postives = 133/173 (76.88%), Query Frame = 1
Query: 25 DVFGGKDGYGRPVEAIDGTNLRGRDRYSVAILSQLAVEYRGQFLDDKVLVSIGVRAPFFKRELNQLCYSQNGSSNVLCTTQTPNAPLANGNVTFGAS-ATQYIPPYATTKEYEDVLPNVGVSWNFAENQFVYASYAEGLSAPRTDNLYTPLRLASGAIVLPGAEPETTKTFDL 540
D FGG D + +DG LR RDR S A L+Q+AVEYRG FL+D + V++GVRAPFFKRELNQ CYSQN SSNV CTT+ PNA LANGNVTF A+ ATQYI PY T +Y+D+LPNVG S+ F ++ VYASYAE LSAPRTD+LY+ +RLA G+I PG EPETT+TFDL
Sbjct: 451 DDFGGLDDKDNRIVNLDGFYLRSRDRLSYATLNQVAVEYRGSFLNDALKVNLGVRAPFFKRELNQYCYSQNASSNVRCTTEVPNATLANGNVTFAATGATQYIAPYERTLKYDDILPNVGASYTFGDST-VYASYAESLSAPRTDSLYSVVRLADGSIGNPGVEPETTQTFDL 622 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52652.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52652.1.1 >prot_P-wetherbeei_contig52652.1.1 ID=prot_P-wetherbeei_contig52652.1.1|Name=mRNA_P-wetherbeei_contig52652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp MNGSPQDVFGGKDGYGRPVEAIDGTNLRGRDRYSVAILSQLAVEYRGQFLback to top mRNA from alignment at P-wetherbeei_contig52652:1..540- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52652.1.1 ID=mRNA_P-wetherbeei_contig52652.1.1|Name=mRNA_P-wetherbeei_contig52652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig52652:1..540- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52652:1..540- >mRNA_P-wetherbeei_contig52652.1.1 ID=mRNA_P-wetherbeei_contig52652.1.1|Name=mRNA_P-wetherbeei_contig52652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig52652:1..540- (Phaeothamnion wetherbeei SAG_119_79)back to top |