mRNA_P-wetherbeei_contig5258.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5258.4.1 vs. uniprot
Match: A0A6I3F420_9ACTN (Ala_racemase_N domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I3F420_9ACTN) HSP 1 Score: 214 bits (544), Expect = 4.290e-65 Identity = 127/245 (51.84%), Postives = 159/245 (64.90%), Query Frame = 1
Query: 1 MTLRLTVRRQAWLDHVHRVAGEIDG-LLPVVKGNGYGFGREVLHPIAAALASGDVVCVGTIHELDFVAPGTRPLVLTPTLVAPVSTDAILTVGSVEHVDALRDWRGTVVLKVRSSMRRYGVPAAHVAALAEQATAAGLTVAGASMHLPLAGDDAGRRAEIELALTALPAATALSVSHLSTTAFAALQAAHPDRPLQLRVGTALWHGDK--STMHLGADVLAVHAVATGELVGYHHVAAPGDGHVV 726
MT+RLTVRR WL HV+ AG ++PVVKGNGYGFGR +LH +A + SGDV CVG+IHEL V P+VLTP L P T +LTVG V+HV AL W G V++K+ SSMRRYGV + L + AAGLT +G ++HLPLAGDD R AEIE LP +AL VSHL+ A+ +L+ HPDR L++R+GTALWHG + +HL A+VL V + GE GY AP G +V
Sbjct: 1 MTVRLTVRRADWLQHVYGTAGAYGSTMVPVVKGNGYGFGRPILHDLARDV-SGDV-CVGSIHELIDVPAALSPVVLTPALRPPSDTWPVLTVGHVDHVRALAGWNGRVMVKLASSMRRYGVGPDELRPLLDTVAAAGLTCSGFALHLPLAGDDDARLAEIEAWFPHLPNESALWVSHLAPAAYTSLRERHPDRDLRIRIGTALWHGRPRGTFLHLSAEVLDVRTIRAGERAGYRLTPAPHGGALV 243
BLAST of mRNA_P-wetherbeei_contig5258.4.1 vs. uniprot
Match: A0A7W1ZB57_9ACTN (Alanine racemase (Fragment) n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1ZB57_9ACTN) HSP 1 Score: 207 bits (528), Expect = 4.300e-63 Identity = 121/242 (50.00%), Postives = 147/242 (60.74%), Query Frame = 1
Query: 1 MTLRLTVRRQAWLDHVHRVAGEIDGLLPVVKGNGYGFGREVLHPIAAALASGDVVCVGTIHELDFVAPGTRPLVLTPTLVAPVSTDAILTVGSVEHVDALRDWRGTVVLKVRSSMRRYGVPAAHVAALAEQATAAGLTVAGASMHLPLAGDDAGRRAEIELALTALPAATALSVSHLSTTAFAALQAAHPDRPLQLRVGTALWHGDKSTMHLGADVLAVHAVATGELVGYHHVAAPGDGHVV 726
MTLRL+V R W H+ VA + GLLPVVKGNGYG G+ L PIAA L+ + +G++HEL V PLVLTP L+AP DAI+TVG+V+HV AL W G VV+K+RSSM RYG + L TAAGL G S+H A D R E L ++SVSHL ++ L AHPD +LR GTALWHGDKS + L ADVL H V+ G+ VGYH V PGDG +V
Sbjct: 1 MTLRLSVYRAPWRAHIAEVATQTPGLLPVVKGNGYGLGQATLMPIAAELSG--TIAIGSVHELAGVPGDVTPLVLTPALLAPGRQDAIMTVGTVDHVRALHGWSGRVVVKLRSSMHRYGTNPGDLDELFASVTAAGLDAVGYSLHSATAATDDERLDEATTWAERLDGPRSISVSHLGAASYRRLAEAHPDVEWRLRAGTALWHGDKSALRLEADVLDQHPVSAGDRVGYHQVHVPGDGVLV 240
BLAST of mRNA_P-wetherbeei_contig5258.4.1 vs. uniprot
Match: UPI000590AE0B (alanine racemase n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI000590AE0B) HSP 1 Score: 206 bits (524), Expect = 2.930e-62 Identity = 121/242 (50.00%), Postives = 150/242 (61.98%), Query Frame = 1
Query: 1 MTLRLTVRRQAWLDHVHRVAGEIDGLLPVVKGNGYGFGREVLHPIAAALASGDVVCVGTIHELDFVAPGTRPLVLTPTLVAPVSTDAILTVGSVEHVDALRDWRGTVVLKVRSSMRRYGVPAAHVAALAEQATAAGLTVAGASMHLPLAGDDAGRRAEIELALTALPAATALSVSHLSTTAFAALQAAHPDRPLQLRVGTALWHGDKSTMHLGADVLAVHAVATGELVGYHHVAAPGDGHVV 726
MT+RL VR W V R DGL+PVVKGNGYGFGR L IAA D V VGT+HELD + P+VLTPTLVAP D +LTVG+ EHV AL+ W G VV+K+ + +RR+G A L ++A AAGL V G ++H P+AG DA R +I+ AL + + VSHL A+ +L A R ++RVGTALWHGDKS +HL ADVL V +A G GYH P DGH+V
Sbjct: 1 MTVRLRVRSAIWRSQVARTVSVTDGLIPVVKGNGYGFGRVRLAEIAAEFC--DTVAVGTVHELDGLPDSLTPVVLTPTLVAPTRRDPVLTVGNDEHVAALKGWSGRVVVKLATDLRRFGGSTA----LVDRARAAGLDVVGVAVHPPIAGTDADRVEQIDRALVDVDPSLPAWVSHLGLEAYRSLPAT---RRYRIRVGTALWHGDKSALHLDADVLDVRRIAAGASAGYHQARVPADGHLV 233
BLAST of mRNA_P-wetherbeei_contig5258.4.1 vs. uniprot
Match: A0A6C7E8G9_ILUCY (Ala_racemase_N domain-containing protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E8G9_ILUCY) HSP 1 Score: 202 bits (515), Expect = 6.630e-61 Identity = 122/242 (50.41%), Postives = 150/242 (61.98%), Query Frame = 1
Query: 1 MTLRLTVRRQAWLDHVHRVAGEIDGLLPVVKGNGYGFGREVLHPIAAALASGDVVCVGTIHELDFVAPGTRPLVLTPTLVAPVSTDAILTVGSVEHVDALRDWRGTVVLKVRSSMRRYGVPAAHVAALAEQATAAGLTVAGASMHLPLAGDDAGRRAEIELALTALPAATALSVSHLSTTAFAALQAAHPDRPLQLRVGTALWHGDKSTMHLGADVLAVHAVATGELVGYHHVAAPGDGHVV 726
MT+RL+VR W + R A IDGL+PVVKGNGYGFGR L IAA + D + VGT+HEL + +VLTPTL AP ILTVG EH+ AL W G V++K+ + +RRYG A V ++A AAGL V G +MH P+AG D R +I ALT + A + VSHL+ A+AAL +H R LRVGTALWHGDKS +HLGADVL V AV G+ GY P GH+V
Sbjct: 1 MTVRLSVRTAIWRSQIARFAASIDGLVPVVKGNGYGFGRRHLADIAAEFS--DTIAVGTVHELADLPDDLDVVVLTPTLTAPADATPILTVGRSEHIAALSGWAGRVIVKLGTELRRYGGDLAVV----DEARAAGLDVIGVAMHPPIAGTDDQRVEQITTALTGVDPALEVWVSHLARDAYAALPDSHRYR---LRVGTALWHGDKSALHLGADVLNVRAVEAGQPAGYQQGTVPASGHLV 233
BLAST of mRNA_P-wetherbeei_contig5258.4.1 vs. uniprot
Match: A0A7Y1ZV71_9ACTN (Ala_racemase_N domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZV71_9ACTN) HSP 1 Score: 202 bits (514), Expect = 9.380e-61 Identity = 124/242 (51.24%), Postives = 147/242 (60.74%), Query Frame = 1
Query: 1 MTLRLTVRRQAWLDHVHRVAGEIDGLLPVVKGNGYGFGREVLHPIAAALASGDVVCVGTIHELDFVAPGTRPLVLTPTLVAPVSTDAILTVGSVEHVDALRDWRGTVVLKVRSSMRRYGVPAAHVAALAEQATAAGLTVAGASMHLPLAGDDAGRRAEIELALTALPAATALSVSHLSTTAFAALQAAHPDRPLQLRVGTALWHGDKSTMHLGADVLAVHAVATGELVGYHHVAAPGDGHVV 726
MT+RLT+R W HV +VA IDGL+PVVKGNGYGFGR VL +AA D + VG IHELD + VLTPTL AP ST ILTV HV AL W+G V++K+ S MRRYG VAA A AAGL V G S+HLPLAG A RA + A+ + + VSHL + +L H R LR+GTALWHGDK +HL ADVLAV AV G++ GY GDGH+V
Sbjct: 1 MTVRLTIRTAPWRSHVAQVASGIDGLVPVVKGNGYGFGRRVLADLAAEFC--DTIAVGNIHELDGLPGELTVAVLTPTLTAPASTSPILTVAEEAHVAALIGWKGRVLVKLTSEMRRYGADTGLVAA----ADAAGLDVVGVSIHLPLAGTAADHRAALTDAVRHVDPGLPVWVSHLDAATYVSLPDTHSYR---LRLGTALWHGDKRHLHLTADVLAVRAVRAGDVAGYRLGRVAGDGHLV 233
BLAST of mRNA_P-wetherbeei_contig5258.4.1 vs. uniprot
Match: A0A6I3WMA2_9ACTN (Ala_racemase_N domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I3WMA2_9ACTN) HSP 1 Score: 197 bits (501), Expect = 1.220e-58 Identity = 122/247 (49.39%), Postives = 149/247 (60.32%), Query Frame = 1
Query: 1 MTLRLTVRRQAWLDHVHRVAGEIDGLLPVVKGNGYGFGREVLHPIAAALASGDVVCVGTIHELDFVAPGTRPLVLTP---TLVAPVSTDAILTVGSVEHVDALRD--WRGTVVLKVRSSMRRYGVPAAHVAALAEQATAAGLTVAGASMHLPLAGDDAGRRAEIELALTALPAATALSVSHLSTTAFAALQAAHPDRPLQLRVGTALWHGDKSTMHLGADVLAVHAVATGELVGYHHVAAPGDGHVV 726
M LRL VRRQAW+ V A GL+PVVKGNGYGFGR L PIAA LA+ V VGT++E V +VLTP L A ++ A LTVG+VEHV AL D WRG VVLK++SSM RYGV + LA AAG T ++HLPL+G E+E LT+L A + +SHL T + + HP+R L++R GTALWH D+S M L ADVL VHAV G+ GY + DG VV
Sbjct: 1 MGLRLRVRRQAWMQSVQAQAALRPGLIPVVKGNGYGFGRRTLMPIAAELAT--QVAVGTVYEAGDVPSNRSAMVLTPHLDALPADLAPTASLTVGAVEHVQALVDQGWRGDVVLKLQSSMHRYGVTPGELGVLASTVDAAGCTPIAYALHLPLSGTAQAHADEVEAWLTSLDPALPVVLSHLDTDTYLQITRRHPERTLRIRCGTALWHADRSLMQLTADVLDVHAVKAGQTAGYRDTSITADGWVV 245
BLAST of mRNA_P-wetherbeei_contig5258.4.1 vs. uniprot
Match: A0A524B4Y2_9ACTN (Ala_racemase_N domain-containing protein n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524B4Y2_9ACTN) HSP 1 Score: 189 bits (480), Expect = 1.550e-55 Identity = 120/241 (49.79%), Postives = 145/241 (60.17%), Query Frame = 1
Query: 1 MTLRLTVRRQAWLDHVHRVAGEIDGLLPVVKGNGYGFGREVLHPIAAALASGDVVCVGTIHELDFVAPGTRPLVLTPTLVAPVST--DAILTVGSVEHVDALRDWRGTVVLKVRSSMRRYGVPAAHVAALAEQATAAGLTVAGASMHLPLAGDDAGRRAEIELALTALPAATALSVSHLSTTAFAALQAAHPDRPLQLRVGTALWHGDKSTMHLGADVLAVHAVATGELVGYHHVAAPGDG 717
MTL L V R AW HV VAG + GL+PVVKGNGYG GR L A+ LA + VGT+HEL V G P+VLTPTL A V DAILTVGS+ H+ AL R +V+KVRSSM RYG A VA+L ++ AG TV G S+H PLAG A EI L + A VSH+S + +L+AA R +LR+GT+LWHGDKS +L ADVL + G +VGYH P G
Sbjct: 1 MTLSLEVDRTAWNRHVEGVAGRVTGLVPVVKGNGYGLGRRWLADRASHLAG--TIAVGTVHELADVPQGVTPVVLTPTLDATVVARPDAILTVGSLAHLAALGGSRQRMVVKVRSSMNRYGTAVADVASLIDECERAGHTVEGVSIHPPLAGSSAEHADEIATLLRDIDARHTAWVSHVSIDDYESLRAADAKRQWRLRLGTSLWHGDKSMFNLRADVLDARPIDAGAVVGYHASTVPASG 239
BLAST of mRNA_P-wetherbeei_contig5258.4.1 vs. uniprot
Match: A0A7W1CNX6_9ACTN (Alanine racemase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1CNX6_9ACTN) HSP 1 Score: 189 bits (479), Expect = 2.130e-55 Identity = 119/248 (47.98%), Postives = 150/248 (60.48%), Query Frame = 1
Query: 1 MTLRLTVRRQAWLDHVHRVAGEIDGLLPVVKGNGYGFGREVLHPIAAALASGDVVCVGTIHELDFVAPGTRPLVLTPTLVAPVSTDAILTVGSVEHVDALRDWRGTVVLKVRSSMRRYGVPAAHVAALAEQATAAGLTVAGASMHLPLAGDDAGRRAEIELALTALPAATALSVSHLSTTAFAALQAAHPDRPLQLRVGTALWHG-DKSTMHLGADVLAVHAVATGELVGYHH--VAAPGDGHVVGSG 735
MTLRLTV W +HV VA GL+PVVKGNGYGFGR L +AA L++ + VGT+HEL + G P+VLTP+L P ILTVGS HVDAL W G VV+K+ SS+RR+GV + LA +A AGL +A ++H P+ G D +I L + VSHLS +AAL A P+RPL++R GTALWHG K +HLGADVL V V+ G+ GY +A G VVG+G
Sbjct: 1 MTLRLTVDTARWREHVAHVARHAPGLIPVVKGNGYGFGRHELATVAAELSA--TIAVGTVHELGGLPGGVTPVVLTPSLRPPDDVRPILTVGSAAHVDALAGWPGRVVVKLCSSVRRFGVTPDELGPLAARARTAGLEIAAFAVHPPVDGPDDEHVDDIATWFDLLAPGDEVWVSHLSADGYAALHDAWPERPLRIRHGTALWHGAGKPALHLGADVLDVRRVSAGDTAGYRRSRIAESGWICVVGAG 246
BLAST of mRNA_P-wetherbeei_contig5258.4.1 vs. uniprot
Match: A0A6L6CTU9_9ACTN (Ala_racemase_N domain-containing protein n=6 Tax=root TaxID=1 RepID=A0A6L6CTU9_9ACTN) HSP 1 Score: 185 bits (470), Expect = 5.190e-54 Identity = 116/247 (46.96%), Postives = 152/247 (61.54%), Query Frame = 1
Query: 1 MTLRLTVRRQAWLDHVHRVAGEIDGLLPVVKGNGYGFGREVLHPIAAALASGDVVCVGTIHELDFVAPGTRPLVLTPT---LVAPVSTDAILTVGSVEHVDALRD--WRGTVVLKVRSSMRRYGVPAAHVAALAEQATAAGLTVAGASMHLPLAGDDAGRRAEIELALTALPAATALSVSHLSTTAFAALQAAHPDRPLQLRVGTALWHGDKSTMHLGADVLAVHAVATGELVGYHHVAAPGDGHVV 726
MTLRLTV+RQAWLDHV A ++PVVKGNGYGFGR +L I A+A G + VGT +E V P P+VLTP + + + ++++LTVGS+EHV LR+ W G V++K+ SS++RYGV + L A + G S+HLPL GD AE + LP L VSHLS + +AL+AAHP + + R+GT LW GDKS MHL ADVLAVH V+ G GY + A +G +V
Sbjct: 1 MTLRLTVQRQAWLDHVRSTADAAGQMVPVVKGNGYGFGRPIL--IEQAVALGHEIAVGTAYEARDVPPTHTPIVLTPLGSDVPSTLPSNSVLTVGSIEHVATLRNAGWTGRVMIKLLSSVKRYGVSPEQLDELTRCIADAHMQHYGWSLHLPLDGDTTQHLAEASHWIAQLPQHLPLHVSHLSPDSISALRAAHPTQTIVARLGTTLWLGDKSNMHLAADVLAVHHVSGGT-AGYRNTAITAEGAIV 244
BLAST of mRNA_P-wetherbeei_contig5258.4.1 vs. uniprot
Match: A0A4P5RK05_9ACTN (Alanine racemase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5RK05_9ACTN) HSP 1 Score: 185 bits (470), Expect = 5.190e-54 Identity = 116/247 (46.96%), Postives = 153/247 (61.94%), Query Frame = 1
Query: 1 MTLRLTVRRQAWLDHVHRVAGEIDGLLPVVKGNGYGFGREVLHPIAAALASGDVVCVGTIHELDFVAPGTRPLVLTPT---LVAPVSTDAILTVGSVEHVDALR--DWRGTVVLKVRSSMRRYGVPAAHVAALAEQATAAGLTVAGASMHLPLAGDDAGRRAEIELALTALPAATALSVSHLSTTAFAALQAAHPDRPLQLRVGTALWHGDKSTMHLGADVLAVHAVATGELVGYHHVAAPGDGHVV 726
MTLRLTV RQAWLDHV A + +LPVVKGNGYGFGR +L AA LA D V VGT++E V P+VLTP L + + A+LTVGS++HV ALR +W+G+V++K++S+M+R+GV +AAL T A L V G S+H PL D+ R E+ + L + VSH++ +L++ P+R R+GTALW G+KS M L A+VL VHAV G GY A PG GH+V
Sbjct: 1 MTLRLTVNRQAWLDHVRLTASQHGTVLPVVKGNGYGFGRPILFEQAAHLA--DHVAVGTVYEATDVPSSLTPVVLTPAGTHLPSSLPAHAVLTVGSLDHVAALRSHNWQGSVLIKLKSTMQRFGVAGNELAALQSACTNASLNVVGWSIHPPLNNDNQDRSGEVSCWMELLHDNLPVYVSHITAEQIVSLRSQFPNRTFVSRMGTALWLGNKSMMKLTAEVLDVHAV-DGGTAGYRSTALPGSGHIV 244 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5258.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5258.4.1 >prot_P-wetherbeei_contig5258.4.1 ID=prot_P-wetherbeei_contig5258.4.1|Name=mRNA_P-wetherbeei_contig5258.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=245bp MTLRLTVRRQAWLDHVHRVAGEIDGLLPVVKGNGYGFGREVLHPIAAALAback to top mRNA from alignment at P-wetherbeei_contig5258:3207..3941+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5258.4.1 ID=mRNA_P-wetherbeei_contig5258.4.1|Name=mRNA_P-wetherbeei_contig5258.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig5258:3207..3941+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5258:3207..3941+ >mRNA_P-wetherbeei_contig5258.4.1 ID=mRNA_P-wetherbeei_contig5258.4.1|Name=mRNA_P-wetherbeei_contig5258.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig5258:3207..3941+ (Phaeothamnion wetherbeei SAG_119_79)back to top |