mRNA_P-wetherbeei_contig52573.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52573.1.1 vs. uniprot
Match: UPI00187944E1 (pilin n=2 Tax=Ramlibacter sp. HM2 TaxID=2780087 RepID=UPI00187944E1) HSP 1 Score: 162 bits (410), Expect = 1.320e-48 Identity = 83/134 (61.94%), Postives = 97/134 (72.39%), Query Frame = 1
Query: 1 YTKRAKLSEAVLAASSCRTPIAEVYQ--SGSASDPPGANGWGCEAGAGTSNPSASSRYVAAVTTSVNGVVKVMVQGSNDSQVDNHFVTLAPMATTNVVAVFASDVGKPLFGWRCGSPADGTDIPSKFLPASCRG 396
YTKRAK+SE +LAASSCRT I EVYQ SG AS PG NGWGCEAG GTS P+ S+YVA+V T+ +G ++V QG NDS +D VTL PMA+ A FA++ G LFGWRCG+ DGT I SKFLP SCRG
Sbjct: 35 YTKRAKMSEVILAASSCRTSITEVYQTVSGGASTAPGVNGWGCEAGTGTSQPTLQSKYVASVHTTADGQIRVTAQGFNDSNIDAKLVTLTPMASATTAATFANNAGSSLFGWRCGNTTDGTTILSKFLPGSCRG 168
BLAST of mRNA_P-wetherbeei_contig52573.1.1 vs. uniprot
Match: A0A353Y5Y5_9BURK (Pilin n=1 Tax=Curvibacter sp. TaxID=1888168 RepID=A0A353Y5Y5_9BURK) HSP 1 Score: 159 bits (401), Expect = 2.630e-47 Identity = 79/132 (59.85%), Postives = 98/132 (74.24%), Query Frame = 1
Query: 1 YTKRAKLSEAVLAASSCRTPIAEVYQSGSASDPPGANGWGCEAGAGTSNPSASSRYVAAVTTSVNGVVKVMVQGSNDSQVDNHFVTLAPMATTNVVAVFASDVGKPLFGWRCGSPADGTDIPSKFLPASCRG 396
YTKRAK+SE +LAAS+CRT + E+YQSGSAS PPGANGWGCEAGAGTSNPS S+YV+A+ T NG + V + D + N V+L P++ N A FA +VG+ +FGWRCG PADGT + + FLP SCRG
Sbjct: 35 YTKRAKMSEVILAASACRTTVTEIYQSGSASSPPGANGWGCEAGAGTSNPSTPSKYVSAIVTDANGAITVT--STIDGALGN--VSLVPLSAPNAAATFAGNVGQAIFGWRCGLPADGTTVRANFLPGSCRG 162
BLAST of mRNA_P-wetherbeei_contig52573.1.1 vs. uniprot
Match: A0A127JQX0_9BURK (Pilin n=1 Tax=Ramlibacter tataouinensis TaxID=94132 RepID=A0A127JQX0_9BURK) HSP 1 Score: 157 bits (396), Expect = 1.660e-46 Identity = 80/132 (60.61%), Postives = 95/132 (71.97%), Query Frame = 1
Query: 1 YTKRAKLSEAVLAASSCRTPIAEVYQSGSASDPPGANGWGCEAGAGTSNPSASSRYVAAVTTSVNGVVKVMVQGSNDSQVDNHFVTLAPMATTNVVAVFASDVGKPLFGWRCGSPADGTDIPSKFLPASCRG 396
YTKRAK+SE VLAAS+CR I EVYQSGSAS+ P ANGWGCEAG GT NP SS+YVA+V T +G V V QG ND+ +D VTL P+ + A++A+ G LFGWRCG+ DGT IPS+FLP SC G
Sbjct: 35 YTKRAKVSEIVLAASACRPVITEVYQSGSASNAPAANGWGCEAGIGTPNPGVSSKYVASVKTDADGKVIVTAQGFNDAAIDAKVVTLTPLKDSTNRAIYANHAGSDLFGWRCGASTDGTTIPSRFLPGSCHG 166
BLAST of mRNA_P-wetherbeei_contig52573.1.1 vs. uniprot
Match: A0A317MW34_9GAMM (Type IV pilus assembly protein PilA n=2 Tax=Plasticicumulans acidivorans TaxID=886464 RepID=A0A317MW34_9GAMM) HSP 1 Score: 130 bits (328), Expect = 3.140e-36 Identity = 69/132 (52.27%), Postives = 88/132 (66.67%), Query Frame = 1
Query: 1 YTKRAKLSEAVLAASSCRTPIAEVYQSGSASDPPGANGWGCEAGAGTSNPSASSRYVAAVTTSVNGVVKVMVQGSNDSQVDNHFVTLAPMATTNVVAVFASDVGKPLFGWRCGSPADGTDIPSKFLPASCRG 396
YTK+AK+SE VLAAS+CRT I EVYQ+GS++ PGANGWGCEA GT +A ++YV +VTT NGV+ V Q D+ +DN + L P A +++G P+F W CG PA IP+KFLP SCRG
Sbjct: 34 YTKKAKMSEVVLAASACRTTITEVYQTGSSTTSPGANGWGCEANTGTGG-TAPTKYVKSVTTDKNGVITVTAQNFGDTDIDNKSIVLTPYANDMAAMAAPTNMGSPVFKWVCG-PAGTDGIPAKFLPGSCRG 163
BLAST of mRNA_P-wetherbeei_contig52573.1.1 vs. uniprot
Match: A0A537G7Q5_9PROT (Pilin n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537G7Q5_9PROT) HSP 1 Score: 127 bits (319), Expect = 5.570e-35 Identity = 70/132 (53.03%), Postives = 92/132 (69.70%), Query Frame = 1
Query: 1 YTKRAKLSEAVLAASSCRTPIAEVYQSGSASDPPGANGWGCEAGAGTSNPSASSRYVAAVTTSVNGVVKVMVQGSNDSQVDNHFVTLAPMATTNVVAVFASDVGKPLFGWRCGSPADGTDIPSKFLPASCRG 396
YT RAK+SE +L S+CRT I E+YQS +S PPGAN W CE+ SAS++YVA + T+ +G V+V VQG + S V+ FVTL P+A+ N A ++G LFGWRCG+PADGTD+ K+LP+SCRG
Sbjct: 32 YTVRAKMSEVILVMSACRTTITELYQS--SSSPPGANNWQCES-------SASTKYVAGLDTNDDGRVRVTVQGISAS-VNGKFVTLTPLASANTAASVTLNMGSGLFGWRCGAPADGTDLLPKYLPSSCRG 153
BLAST of mRNA_P-wetherbeei_contig52573.1.1 vs. uniprot
Match: UPI00187D1FD3 (pilin n=1 Tax=Ramlibacter aquaticus TaxID=2780094 RepID=UPI00187D1FD3) HSP 1 Score: 127 bits (319), Expect = 5.740e-35 Identity = 70/132 (53.03%), Postives = 87/132 (65.91%), Query Frame = 1
Query: 1 YTKRAKLSEAVLAASSCRTPIAEVYQSGSASDPPGANGWGCEAGAGTSNPSASSRYVAAVTTSVNGVVKVMVQGSNDSQVDNHFVTLAPMATTNVVAVFASDVGKPLFGWRCGSPADGTDIPSKFLPASCRG 396
Y+KRAK+SE +LAAS+CRT I EVYQSGS + P A+GWGCE + ASS+YV +V T NGV+ VM QG ND ++D + L P VA ASD+GKP+F W CG AD +P KFLP +CRG
Sbjct: 33 YSKRAKMSELILAASACRTTITEVYQSGSTTPP--ADGWGCE------STDASSKYVRSVHTDQNGVITVMAQGFNDDKIDQMQIQLVPYRDATTVAKAASDLGKPIFRWVCGPTAD-NGVPLKFLPGTCRG 155
BLAST of mRNA_P-wetherbeei_contig52573.1.1 vs. uniprot
Match: A0A521VFZ3_9PROT (Pilin n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VFZ3_9PROT) HSP 1 Score: 124 bits (310), Expect = 9.900e-34 Identity = 68/132 (51.52%), Postives = 88/132 (66.67%), Query Frame = 1
Query: 1 YTKRAKLSEAVLAASSCRTPIAEVYQSGSASDPPGANGWGCEAGAGTSNPSASSRYVAAVTTSVNGVVKVMVQGSNDSQVDNHFVTLAPMATTNVVAVFASDVGKPLFGWRCGSPADGTDIPSKFLPASCRG 396
Y KR ++SE +LA S+CRTP+AEVYQSG ++ P GA WGCE + PS SRYV ++ T NG + M QG DS +D VTL P+ + A A+D+GK + GWRCGS ADGT IP+ +LPASC+G
Sbjct: 21 YVKRTRMSEVLLALSNCRTPVAEVYQSGGSTGP-GAGNWGCE----VTGPS--SRYVQSIATDPNGKIIAMAQGFGDSAIDGKVVTLVPLVGS-APANAATDMGKAVTGWRCGSLADGTTIPANYLPASCKG 144
BLAST of mRNA_P-wetherbeei_contig52573.1.1 vs. uniprot
Match: A0A536SJ41_9PROT (Pilin n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SJ41_9PROT) HSP 1 Score: 124 bits (310), Expect = 1.080e-33 Identity = 67/133 (50.38%), Postives = 91/133 (68.42%), Query Frame = 1
Query: 1 YTKRAKLSEAVLAASSCRTPIAEVYQSGSASDPPGANGWGCEAGAGTSNPSASSRYVAAVTTSVNGVVKVMVQGSNDSQVDNHFVTLAPMATTNVVAVFASDVGK-PLFGWRCGSPADGTDIPSKFLPASCRG 396
Y+ RAK+SE +LAAS CRT I+EVYQSG+++ ANGWGCE T+ ++YVA + T+ NG+V V QG +++ +D VTL P+A AV +D G L+GWRCG+P DGT++PSK+LP SCRG
Sbjct: 21 YSIRAKMSEVILAASGCRTSISEVYQSGTSASAV-ANGWGCEI---TTAGVGGTKYVATINTTQNGLVSVTTQGFSNANIDGKVVTLLPLAKAGTAAV-GTDAGTVTLYGWRCGAPGDGTNVPSKYLPGSCRG 148
BLAST of mRNA_P-wetherbeei_contig52573.1.1 vs. uniprot
Match: A0A521VVY5_9PROT (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VVY5_9PROT) HSP 1 Score: 122 bits (306), Expect = 8.920e-33 Identity = 67/132 (50.76%), Postives = 86/132 (65.15%), Query Frame = 1
Query: 1 YTKRAKLSEAVLAASSCRTPIAEVYQSGSASDPPGANGWGCEAGAGTSNPSASSRYVAAVTTSVNGVVKVMVQGSNDSQVDNHFVTLAPMATTNVVAVFASDVGKPLFGWRCGSPADGTDIPSKFLPASCRG 396
Y R ++SE VLA S+CRTP++EVYQ+G A PPGA WGCE S PS S YV ++ T +G + M QG +DS +D VTL P+ A A+D+GK + GWRCGSPADGT I + +LPASC+G
Sbjct: 50 YISRTRMSEVVLALSACRTPVSEVYQAGGA--PPGAGNWGCE----VSGPS--SIYVQSIATDASGKITAMAQGFSDSAIDGKVVTLVPLIG-GAAANAATDMGKAVTGWRCGSPADGTTISATYLPASCKG 172
BLAST of mRNA_P-wetherbeei_contig52573.1.1 vs. uniprot
Match: A0A1F3ZDR4_9PROT (Pilin n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_67_12 TaxID=1797483 RepID=A0A1F3ZDR4_9PROT) HSP 1 Score: 121 bits (304), Expect = 1.510e-32 Identity = 68/132 (51.52%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 1 YTKRAKLSEAVLAASSCRTPIAEVYQSGSASDPPGANGWGCEAGAGTSNPSASSRYVAAVTTSVNGVVKVMVQGSNDSQVDNHFVTLAPMATTNVVAVFASDVGKPLFGWRCGSPADGTDIPSKFLPASCRG 396
Y KR ++SE VLA S+CRTPI+EVYQSGS + P GA WGCE S PS S YV ++ T NG + M QG NDS +D +TL PM A+D+GK + WRCGS ADGT IP +LP+SC G
Sbjct: 43 YVKRTRMSEVVLAVSACRTPISEVYQSGSGTGP-GAGNWGCE----VSGPS--SVYVQSIATDANGKIMAMAQGFNDSAIDGKVLTLVPMIG-GAAGNAATDMGKAVTSWRCGSTADGTTIPVNYLPSSCHG 166 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52573.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52573.1.1 >prot_P-wetherbeei_contig52573.1.1 ID=prot_P-wetherbeei_contig52573.1.1|Name=mRNA_P-wetherbeei_contig52573.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp YTKRAKLSEAVLAASSCRTPIAEVYQSGSASDPPGANGWGCEAGAGTSNPback to top mRNA from alignment at P-wetherbeei_contig52573:2..400+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52573.1.1 ID=mRNA_P-wetherbeei_contig52573.1.1|Name=mRNA_P-wetherbeei_contig52573.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig52573:2..400+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52573:2..400+ >mRNA_P-wetherbeei_contig52573.1.1 ID=mRNA_P-wetherbeei_contig52573.1.1|Name=mRNA_P-wetherbeei_contig52573.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig52573:2..400+ (Phaeothamnion wetherbeei SAG_119_79)back to top |