mRNA_P-wetherbeei_contig52274.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig52274.1.1
Unique NamemRNA_P-wetherbeei_contig52274.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig52274.1.1 vs. uniprot
Match: A0A7X9AEM1_9BURK (DUF4129 domain-containing protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AEM1_9BURK)

HSP 1 Score: 133 bits (335), Expect = 1.600e-33
Identity = 71/140 (50.71%), Postives = 91/140 (65.00%), Query Frame = 1
Query:    1 RQTRPPEDSKALRGLVALNVTIAILAVGQQLEWPGFSKVGLALTLAAMGFSFAVRRRNNWDVKAFLSVAMMLALMNFMVGLSGNTADPRLPLAELLVWLQTLHSFDLPGRRDLNYSLLVALVLMSVAAVLSVYSSYGIFL 420
            ++ + PEDS  LR  V  +V IAILA   Q+EWP F    + LTL    FS+  R  +NW +K  LS+ M+L L NF+V L+    DPR PLAELL+WL TLHSFDLP R+DL YS+LV ++L+S  AVLS    YG +L
Sbjct:   14 KRPKQPEDSIPLRVGVGFSVGIAILAALHQMEWPFFGWAVMGLTLLGSLFSWYRRTHSNWLLKVVLSILMLLVLFNFLVSLAATPYDPRFPLAELLLWLLTLHSFDLPARKDLKYSMLVGIILISFGAVLSSSLGYGAYL 153          
BLAST of mRNA_P-wetherbeei_contig52274.1.1 vs. uniprot
Match: A0A7V1V1Q7_9BACT (DUF3488 domain-containing protein (Fragment) n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7V1V1Q7_9BACT)

HSP 1 Score: 113 bits (282), Expect = 1.230e-26
Identity = 65/143 (45.45%), Postives = 88/143 (61.54%), Query Frame = 1
Query:    4 QTRPPEDSKALRGLVALNVTIAILAVGQQLEWPGFSKVGLALTLAAMGFSFAV----RRRNNWDVKAFLSVAMMLALMNFMVGLSGNTADPRLPLAELLVWLQTLHSFDLPGRRDLNYSLLVALVLMSVAAVLSVYSSYGIFL 420
            Q RP EDS  +RG V   V +A+ AV  Q E+     V  A+  AA+G  F V    RR +NW +K  +++ +++   +F V L  N  DPR+PL  L +WLQ LHSFDLP R+DL YSL  A+VLM+VAAV +   S+G+FL
Sbjct:    8 QKRPAEDSLLIRGAVLAAVLVAVSAVAVQEEFT----VQAAIAAAAIGAGFWVSHLRRRASNWALKIVITILVLVVARDFFVTLLANPYDPRVPLVRLFLWLQALHSFDLPARKDLKYSLASAIVLMAVAAVYTREMSFGLFL 146          
BLAST of mRNA_P-wetherbeei_contig52274.1.1 vs. uniprot
Match: A0A2M7FY08_9BACT (TGc domain-containing protein n=1 Tax=bacterium (Candidatus Blackallbacteria) CG17_big_fil_post_rev_8_21_14_2_50_48_46 TaxID=2014261 RepID=A0A2M7FY08_9BACT)

HSP 1 Score: 112 bits (280), Expect = 4.240e-26
Identity = 68/138 (49.28%), Postives = 84/138 (60.87%), Query Frame = 1
Query:   10 RPPEDSKALRGLVALNVTIAILAVGQQLEWPG-FSKVGLALTLAAMGFSFAVRRRNNWDVKAFLSVAMMLALMNFMVGLSGNTADPRLPLAELLVWLQTLHSFDLPGRRDLNYSLLVALVLMSVAAVLSVYSSYGIFL 420
            R  ED+   R LV L V +AI A       PG  S   L +T      S+  RR  NW +K  L++ MM+AL NFM+ +S N  D R+PLA LL+WLQ LHSFDLP R+DL YSL VAL+L+SVAA LS   S+  FL
Sbjct:   14 REVEDALLPRLLVFLTVAVAIFATTYCAMSPGSLSLTALLVTFLGSWLSWHRRRAKNWWIKLILALLMMVALANFMLEISQNIFDARIPLAHLLIWLQVLHSFDLPRRKDLFYSLWVALILISVAATLSRDGSFSYFL 151          
BLAST of mRNA_P-wetherbeei_contig52274.1.1 vs. uniprot
Match: A0A1Q7QHD1_9BACT (Uncharacterized protein n=2 Tax=Terrabacteria group TaxID=1783272 RepID=A0A1Q7QHD1_9BACT)

HSP 1 Score: 112 bits (279), Expect = 4.630e-26
Identity = 62/140 (44.29%), Postives = 83/140 (59.29%), Query Frame = 1
Query:    1 RQTRPPEDSKALRGLVALNVTIAILAVGQQLEWPGFSKVGLALTLAAMGFSFAVRRRNNWDVKAFLSVAMMLALMNFMVGLSGNTADPRLPLAELLVWLQTLHSFDLPGRRDLNYSLLVALVLMSVAAVLSVYSSYGIFL 420
            R  RP EDS ALR  V L V +A+ AVG Q E+   + +     + A G S+  RR  NW +K  ++  +     +F V L  N  DPR+PL  L +WLQ LHSFDLP R+DL YSL  A+VLM+V AV +  +S+G+ L
Sbjct:   11 RFRRPAEDSLALRAAVLLAVLVAVAAVGVQEEFTAQAVLAACAIIVAHGVSYLRRRSPNWWMKLAIAGLIFAVARDFFVALVANPYDPRIPLVRLFLWLQVLHSFDLPARKDLKYSLASAVVLMAVGAVYTRGTSFGLLL 150          
BLAST of mRNA_P-wetherbeei_contig52274.1.1 vs. uniprot
Match: A0A537IUC9_9BACT (DUF3488 domain-containing protein n=1 Tax=Terrabacteria group bacterium ANGP1 TaxID=2569760 RepID=A0A537IUC9_9BACT)

HSP 1 Score: 105 bits (263), Expect = 8.210e-24
Identity = 60/140 (42.86%), Postives = 82/140 (58.57%), Query Frame = 1
Query:    1 RQTRPPEDSKALRGLVALNVTIAILAVGQQLEWPGFSKVGLALTLAAMGFSFAVRRRNNWDVKAFLSVAMMLALMNFMVGLSGNTADPRLPLAELLVWLQTLHSFDLPGRRDLNYSLLVALVLMSVAAVLSVYSSYGIFL 420
            R +RP EDS A+R    L V IA+ AVG Q E+   + +     + A G S+  RR  NW +K  +   +     +F V L  N  DPR+PL  L +WLQ LHSFDLP R+DL YSL  A+VLM+V AV +  +++G+ L
Sbjct:   23 RFSRPAEDSLAVRVAALLAVLIAVAAVGVQEEFKAQAALAALAIVVAHGVSYLRRRSPNWWMKLAIVALIFGVARDFFVVLVANPYDPRIPLVRLFLWLQVLHSFDLPARKDLKYSLASAVVLMAVGAVYARETAFGLLL 162          
BLAST of mRNA_P-wetherbeei_contig52274.1.1 vs. uniprot
Match: UPI0019A26779 (DUF3488 domain-containing protein n=1 Tax=Candidatus Sericytochromatia bacterium TaxID=2762020 RepID=UPI0019A26779)

HSP 1 Score: 105 bits (261), Expect = 1.480e-23
Identity = 59/137 (43.07%), Postives = 84/137 (61.31%), Query Frame = 1
Query:   19 EDSKALRGLVALNVTIAI---LAVGQQLEWPGFSKVGLALTLAAMGFSFAVRRRNNWDVKAFLSVAMMLALMNFMVGLSGNTADPRLPLAELLVWLQTLHSFDLPGRRDLNYSLLVALVLMSVAAVLSVYSSYGIFL 420
            EDS A R +V + V IAI   + V +  +  G     + LT+     S+  R   NW +K  +S+AM++   +F+  + GN  D R+PLA LL+WLQ LHS+DLP RRD+NYS+LVAL+L+SV A +S    +G FL
Sbjct:   23 EDSIAFRTIVTITVVIAISSTILVSE--DGMGLGITTIILTILGAFISYKRRSAKNWWIKIIISLAMLITFGDFIRNVLGNPYDARIPLANLLIWLQVLHSYDLPRRRDINYSILVALILVSVTATISRDLVFGFFL 157          
BLAST of mRNA_P-wetherbeei_contig52274.1.1 vs. uniprot
Match: A0A2N1V1T7_9BACT (TGc domain-containing protein (Fragment) n=1 Tax=Candidatus Melainabacteria bacterium HGW-Melainabacteria-1 TaxID=2013813 RepID=A0A2N1V1T7_9BACT)

HSP 1 Score: 105 bits (261), Expect = 1.530e-23
Identity = 60/128 (46.88%), Postives = 80/128 (62.50%), Query Frame = 1
Query:   19 EDSKALRGLVALNVTIAILAVGQQLE---WPGFSKVGLALTLAAMGFSFAVRRRNNWDVKAFLSVAMMLALMNFMVGLSGNTADPRLPLAELLVWLQTLHSFDLPGRRDLNYSLLVALVLMSVAAVLS 393
            EDS  LR LV L + +AI A  Q  E   W     +G+  ++     S+  RR  NW +K  L++ M++AL NF+  +S N  D R+PLA LL+WLQ LHSFDLP R+D+ YSL VAL+L+SVAA  S
Sbjct:   20 EDSILLRVLVLLTIVVAIGATAQATESDLW--MPLLGIGGSVLGAWVSWTRRRAKNWWIKLILALLMLVALANFLTEISDNPYDARIPLAHLLIWLQVLHSFDLPRRKDVFYSLWVALILISVAATTS 145          
BLAST of mRNA_P-wetherbeei_contig52274.1.1 vs. uniprot
Match: A0A7C2I0J7_9FIRM (DUF3488 domain-containing protein n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C2I0J7_9FIRM)

HSP 1 Score: 104 bits (260), Expect = 2.060e-23
Identity = 59/140 (42.14%), Postives = 82/140 (58.57%), Query Frame = 1
Query:    1 RQTRPPEDSKALRGLVALNVTIAILAVGQQLEWPGFSKVGLALTLAAMGFSFAVRRRNNWDVKAFLSVAMMLALMNFMVGLSGNTADPRLPLAELLVWLQTLHSFDLPGRRDLNYSLLVALVLMSVAAVLSVYSSYGIFL 420
            R   PPEDS  +R LV   V IA+LAVG   E+   + +  A        S A+RRR  + +KA ++  +++   +F   L  N  DPR+ L  L +WLQ LHSFDLP RRDL YSL  A+VL++VAAV +   ++G+ L
Sbjct:    6 RPAPPPEDSVTVRALVLCTVLIAVLAVGIHEEFTVRASLSAAAITGGFVTSHALRRRRRFWLKAVITALVLVGARDFFSALIANPYDPRVALVNLFLWLQALHSFDLPARRDLKYSLASAVVLVAVAAVYARDGAFGLLL 145          
BLAST of mRNA_P-wetherbeei_contig52274.1.1 vs. uniprot
Match: A0A1Q7FUS7_9BACT (TGc domain-containing protein n=1 Tax=Armatimonadetes bacterium 13_1_40CM_64_14 TaxID=1805026 RepID=A0A1Q7FUS7_9BACT)

HSP 1 Score: 100 bits (250), Expect = 4.620e-22
Identity = 55/141 (39.01%), Postives = 83/141 (58.87%), Query Frame = 1
Query:    1 RQTRP-PEDSKALRGLVALNVTIAILAVGQQLEWPGFSKVGLALTLAAMGFSFAVRRRNNWDVKAFLSVAMMLALMNFMVGLSGNTADPRLPLAELLVWLQTLHSFDLPGRRDLNYSLLVALVLMSVAAVLSVYSSYGIFL 420
            R  RP PEDS+ +R    L V +A+ AV  Q E+   + +     +     S+  RR +NW +K  L+  ++ A+  F   L  N  DPR+PL +L +WLQ LHSFDLP R+DL YSL  A++L+++ AV +  +++G FL
Sbjct:   14 RFPRPAPEDSRVVRVATLLAVLVAVAAVAIQEEFTSQAILAAGGIVVGYVVSYLRRRGSNWWLKIALTAGILFAMREFFAALVANPYDPRIPLVQLFLWLQVLHSFDLPARKDLKYSLASAVILLAIGAVYTRATTFGWFL 154          
BLAST of mRNA_P-wetherbeei_contig52274.1.1 vs. uniprot
Match: UPI0019F1098C (DUF3488 domain-containing protein n=1 Tax=Candidatus Sericytochromatia bacterium TaxID=2762020 RepID=UPI0019F1098C)

HSP 1 Score: 100 bits (248), Expect = 8.680e-22
Identity = 61/136 (44.85%), Postives = 84/136 (61.76%), Query Frame = 1
Query:   19 EDSKALRGLVALNVTIAILAVGQQLEWPGFSKVGLALTLAAMG--FSFAVRRRNNWDVKAFLSVAMMLALMNFMVGLSGNTADPRLPLAELLVWLQTLHSFDLPGRRDLNYSLLVALVLMSVAAVLSVYSSYGIFL 420
            E S   R L  L +++AILA     E  G   +  A+ L+A+G   S+  R   NW +K  L++ M+LAL NF+  +     DPR+PLA LL+WLQ LHSFDLP R+D+ YSL V L+L+SVAA  S  +++G FL
Sbjct:   19 EHSVLTRLLTLLTISVAILATILVTEGRGMLALS-AIGLSAIGSWVSWQRREARNWWIKLILALLMLLALANFLSEIGEQFYDPRIPLANLLIWLQVLHSFDLPRRKDIFYSLWVGLILISVAATTSRDNTFGGFL 153          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52274.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9AEM1_9BURK1.600e-3350.71DUF4129 domain-containing protein n=1 Tax=Burkhold... [more]
A0A7V1V1Q7_9BACT1.230e-2645.45DUF3488 domain-containing protein (Fragment) n=1 T... [more]
A0A2M7FY08_9BACT4.240e-2649.28TGc domain-containing protein n=1 Tax=bacterium (C... [more]
A0A1Q7QHD1_9BACT4.630e-2644.29Uncharacterized protein n=2 Tax=Terrabacteria grou... [more]
A0A537IUC9_9BACT8.210e-2442.86DUF3488 domain-containing protein n=1 Tax=Terrabac... [more]
UPI0019A267791.480e-2343.07DUF3488 domain-containing protein n=1 Tax=Candidat... [more]
A0A2N1V1T7_9BACT1.530e-2346.88TGc domain-containing protein (Fragment) n=1 Tax=C... [more]
A0A7C2I0J7_9FIRM2.060e-2342.14DUF3488 domain-containing protein n=1 Tax=Firmicut... [more]
A0A1Q7FUS7_9BACT4.620e-2239.01TGc domain-containing protein n=1 Tax=Armatimonade... [more]
UPI0019F1098C8.680e-2244.85DUF3488 domain-containing protein n=1 Tax=Candidat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52274contigP-wetherbeei_contig52274:4..423 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog272134.KB731324_gene3736
PFAMsDUF3488,DUF4129,Transglut_core
Model size420
Max annot lvl1117|Cyanobacteria
KEGG koko:K22452
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.53e-20
EggNOG OGsCOG1305@1|root,COG1305@2|Bacteria,1FZW2@1117|Cyanobacteria,1H7X1@1150|Oscillatoriales
EC2.3.2.13
DescriptionPFAM Transglutaminase-like superfamily
Cds size420
COG categoryE
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186783.8676877-CDS-P-wetherbeei_contig52274:3..4231683186783.8676877-CDS-P-wetherbeei_contig52274:3..423Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig52274 4..423 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52274.1.1prot_P-wetherbeei_contig52274.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig52274 4..423 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig52274.1.1

>prot_P-wetherbeei_contig52274.1.1 ID=prot_P-wetherbeei_contig52274.1.1|Name=mRNA_P-wetherbeei_contig52274.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=140bp
RQTRPPEDSKALRGLVALNVTIAILAVGQQLEWPGFSKVGLALTLAAMGF
SFAVRRRNNWDVKAFLSVAMMLALMNFMVGLSGNTADPRLPLAELLVWLQ
TLHSFDLPGRRDLNYSLLVALVLMSVAAVLSVYSSYGIFL
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mRNA from alignment at P-wetherbeei_contig52274:4..423-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig52274.1.1 ID=mRNA_P-wetherbeei_contig52274.1.1|Name=mRNA_P-wetherbeei_contig52274.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig52274:4..423- (Phaeothamnion wetherbeei SAG_119_79)
CGCCAGACGCGGCCCCCCGAGGATTCCAAGGCGCTGCGTGGACTCGTAGC CCTCAATGTTACGATCGCGATCCTGGCCGTGGGCCAGCAGTTAGAATGGC CCGGCTTCAGCAAAGTGGGTCTCGCCCTCACGCTGGCAGCGATGGGGTTC AGTTTCGCGGTGAGGCGGCGGAACAATTGGGACGTTAAGGCCTTTCTTTC GGTGGCGATGATGCTGGCCCTTATGAATTTTATGGTGGGCCTGTCGGGCA ACACCGCGGACCCACGGCTCCCGCTCGCCGAGCTTCTCGTATGGCTACAA ACCCTGCATAGCTTCGATCTGCCCGGGCGCCGCGATCTGAACTATTCGCT GTTGGTAGCCCTGGTCCTGATGTCGGTGGCTGCCGTTCTGAGCGTTTATT CGTCTTACGGTATTTTTCTA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig52274:4..423-

>mRNA_P-wetherbeei_contig52274.1.1 ID=mRNA_P-wetherbeei_contig52274.1.1|Name=mRNA_P-wetherbeei_contig52274.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig52274:4..423- (Phaeothamnion wetherbeei SAG_119_79)
CGCCAGACGCGGCCCCCCGAGGATTCCAAGGCGCTGCGTGGACTCGTAGC
CCTCAATGTTACGATCGCGATCCTGGCCGTGGGCCAGCAGTTAGAATGGC
CCGGCTTCAGCAAAGTGGGTCTCGCCCTCACGCTGGCAGCGATGGGGTTC
AGTTTCGCGGTGAGGCGGCGGAACAATTGGGACGTTAAGGCCTTTCTTTC
GGTGGCGATGATGCTGGCCCTTATGAATTTTATGGTGGGCCTGTCGGGCA
ACACCGCGGACCCACGGCTCCCGCTCGCCGAGCTTCTCGTATGGCTACAA
ACCCTGCATAGCTTCGATCTGCCCGGGCGCCGCGATCTGAACTATTCGCT
GTTGGTAGCCCTGGTCCTGATGTCGGTGGCTGCCGTTCTGAGCGTTTATT
CGTCTTACGGTATTTTTCTA
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