mRNA_P-wetherbeei_contig5227.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5227.1.2 vs. uniprot
Match: A0A7S2U7W7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7W7_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.380e-11 Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 2
Query: 794 RRGKWTPEEEAYAKALIDCFDSGELDDCPPSGTLRAYLARRLGCSPMRVSKKLAGYRNDKRYTMSR 991
RRGKWT EEE YAK L+ F++G + +C TLRA+L+RRL C+PMR+SKK AG K +SR
Sbjct: 48 RRGKWTMEEEKYAKDLVQQFENGTVSNCDNGSTLRAFLSRRLHCAPMRISKKFAGQGIGKHVFLSR 113
BLAST of mRNA_P-wetherbeei_contig5227.1.2 vs. uniprot
Match: A0A6S8SZL3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8SZL3_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.630e-11 Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 2
Query: 794 RRGKWTPEEEAYAKALIDCFDSGELDDCPPSGTLRAYLARRLGCSPMRVSKKLAGYRNDKRYTMSR 991
RRGKW P+EE YAK+LID F+ G ++ C TLRAYL+R+L C PMR+SKK AG K+ MSR
Sbjct: 180 RRGKWMPDEERYAKSLIDAFEKGIINGCENGCTLRAYLSRKLHCQPMRISKKYAGKSIGKQVYMSR 245
BLAST of mRNA_P-wetherbeei_contig5227.1.2 vs. uniprot
Match: A0A7S3P4D1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4D1_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 2.060e-10 Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = 2
Query: 794 RRGKWTPEEEAYAKALIDCFDSGELDDCPPSGTLRAYLARRLGCSPMRVSKKLAG 958
R GKW EEEAYA+ LI FD G+L DC T+RAYLA++L C+PMR+SKK AG
Sbjct: 136 RSGKWLKEEEAYAELLIRMFDRGQLSDCVTGSTMRAYLAQKLHCAPMRISKKFAG 190
BLAST of mRNA_P-wetherbeei_contig5227.1.2 vs. uniprot
Match: A0A7S2V6K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6K2_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 2.500e-10 Identity = 42/98 (42.86%), Postives = 53/98 (54.08%), Query Frame = 2
Query: 794 RRGKWTPEEEAYAKALIDCFDSGELDDCPPSGTLRAYLARRLGCSPMRVSKKLAGYRNDKRYTMSRRFKGVHTVMSMGDQGARKHLDVLETAFLSRMA 1087
RRGKWTPEEEAYA LI F SG L TLR +L++ L C PMR+SKK G + RR + + + +R+ L LE FL R+A
Sbjct: 21 RRGKWTPEEEAYATRLIQEFKSGLLP-LADGTTLRTFLSKLLNCEPMRISKKFVGSNCIGKQVFRRRQADMDRLTPVEIDRSRQELAELERRFLERVA 117
BLAST of mRNA_P-wetherbeei_contig5227.1.2 vs. uniprot
Match: A0A7S2GE85_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GE85_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 3.560e-9 Identity = 30/63 (47.62%), Postives = 44/63 (69.84%), Query Frame = 2
Query: 770 KMAADAEERRGKWTPEEEAYAKALIDCFDSGELDDCPPSGTLRAYLARRLGCSPMRVSKKLAG 958
+ + ++R+GKWT EEE YA +ID F+ G L+ P TLR+YL+++LGC PMR++KK G
Sbjct: 13 RQSDSCQKRKGKWTVEEEEYASCIIDYFEQGLLE-LPDGTTLRSYLSKKLGCHPMRITKKFTG 74
BLAST of mRNA_P-wetherbeei_contig5227.1.2 vs. uniprot
Match: A0A835Z4F5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4F5_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 5.170e-9 Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 2
Query: 794 RRGKWTPEEEAYAKALIDCFDSGELDDCPPSGTLRAYLARRLGCSPMRVSKKLAG 958
RRGKW+ EEEAY + +I F++G L P TLRAYLA++L C PMR++KK G
Sbjct: 2 RRGKWSSEEEAYTERIIHYFNTGVLQ-LPEGTTLRAYLAKKLQCDPMRITKKFTG 55
BLAST of mRNA_P-wetherbeei_contig5227.1.2 vs. uniprot
Match: A0A7S2FMV8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FMV8_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 8.130e-9 Identity = 34/56 (60.71%), Postives = 38/56 (67.86%), Query Frame = 2
Query: 794 RRGKWTPEEEAYAKALIDCFDSGELDDCPPSG-TLRAYLARRLGCSPMRVSKKLAG 958
R+GKW EEE YA LI F SG L D P SG TLRAYLA +L C PMR++KK G
Sbjct: 38 RKGKWLKEEEDYALMLISHFKSGHLKDEPTSGVTLRAYLAEKLDCEPMRITKKFNG 93
BLAST of mRNA_P-wetherbeei_contig5227.1.2 vs. uniprot
Match: A0A7S2D300_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D300_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 8.260e-9 Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = 2
Query: 794 RRGKWTPEEEAYAKALIDCFDSGELDDCPPSGTLRAYLARRLGCSPMRVSKKLAG 958
RRGKWT EEEAYA LI F +G + DC TLR++LA +L C+PMR+SKK AG
Sbjct: 39 RRGKWTDEEEAYANRLIADFKTGVVADCEEGCTLRSFLASKLQCAPMRISKKYAG 93
BLAST of mRNA_P-wetherbeei_contig5227.1.2 vs. uniprot
Match: A0A7S3VA44_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VA44_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.020e-8 Identity = 43/98 (43.88%), Postives = 53/98 (54.08%), Query Frame = 2
Query: 794 RRGKWTPEEEAYAKALIDCFDSGELDDCPPSGTLRAYLARRLGCSPMRVSKKLAGYRNDKRYTMSRRFKGVHTVMSMGDQGARKHLDVLETAFLSRMA 1087
RRGKWTPEEEAYA LI F SG L TLR +L++ L C PMR+SKK G + RR ++ + Q +R L LE FL R+A
Sbjct: 294 RRGKWTPEEEAYANRLIMEFKSGLLP-LTDGTTLRTFLSKLLNCDPMRISKKFVGNNCIGKQVFRRRTADINRLTPEQIQTSRAELSELERRFLERVA 390
BLAST of mRNA_P-wetherbeei_contig5227.1.2 vs. uniprot
Match: A0A485LT29_9STRA (Aste57867_24889 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LT29_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.530e-8 Identity = 30/51 (58.82%), Postives = 33/51 (64.71%), Query Frame = 2
Query: 800 GKWTPEEEAYAKALIDCFDSGELDDCPPSGTLRAYLARRLGCSPMRVSKKL 952
G+W P EE YA I CF G LDDC TLR Y+ARRL C MRV+KKL
Sbjct: 7 GRWLPAEEVYADLAISCFLEGILDDCACGTTLRQYIARRLHCDEMRVTKKL 57 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5227.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5227.1.2 >prot_P-wetherbeei_contig5227.1.2 ID=prot_P-wetherbeei_contig5227.1.2|Name=mRNA_P-wetherbeei_contig5227.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=878bp MVQKGPVFEDKMAADAEERRGKWTPEEEAYAKALIDCFDSGELDDCPPSGback to top mRNA from alignment at P-wetherbeei_contig5227:3..3906- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5227.1.2 ID=mRNA_P-wetherbeei_contig5227.1.2|Name=mRNA_P-wetherbeei_contig5227.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3904bp|location=Sequence derived from alignment at P-wetherbeei_contig5227:3..3906- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5227:3..3906- >mRNA_P-wetherbeei_contig5227.1.2 ID=mRNA_P-wetherbeei_contig5227.1.2|Name=mRNA_P-wetherbeei_contig5227.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2634bp|location=Sequence derived from alignment at P-wetherbeei_contig5227:3..3906- (Phaeothamnion wetherbeei SAG_119_79)back to top |