mRNA_P-wetherbeei_contig52264.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52264.1.1 vs. uniprot
Match: A0A7V8X647_9CHLR (Ester cyclase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8X647_9CHLR) HSP 1 Score: 135 bits (340), Expect = 1.380e-34 Identity = 71/148 (47.97%), Postives = 98/148 (66.22%), Query Frame = 1
Query: 16 RWYRDFPYIHTLRFRLVMLVVVASLPALGLLYYTVSQQRDDALDAGQAEAVNLANLAAVDQERLIDQTRRYLLTLARLPELRGDDVSECTSLVQALLDDNAYAYQNIGIIRADGTIPCQA--SGLRPIFFDDHPDNLRAALAAGDMTI 453
RW FP+ H+LRFRL +LV++ASLPA+GLL YT +QQRDDAL GQ EA L LAA+DQ R+ DQ + L+T+ARLPE+RGDD +C+ L+ L++ N+ + N+G++ DG++ C A G I D+ + A AA D I
Sbjct: 34 RWLSQFPFFHSLRFRLTLLVLLASLPAIGLLLYTANQQRDDALAEGQGEANRLVRLAAIDQGRIFDQAEQLLITVARLPEVRGDDAEQCSRLMAELIEANSE-FNNLGVVDRDGSVVCSAVEGGAGVILRDEQ--FIEDAFAANDFVI 178
BLAST of mRNA_P-wetherbeei_contig52264.1.1 vs. uniprot
Match: A0A7W0A508_9CHLR (Ester cyclase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0A508_9CHLR) HSP 1 Score: 130 bits (326), Expect = 1.060e-32 Identity = 72/158 (45.57%), Postives = 101/158 (63.92%), Query Frame = 1
Query: 1 MSTLARWYRDFPYIHTLRFRLVMLVVVASLPALGLLYYTVSQQRDDALDAGQAEAVNLANLAAVDQERLIDQTRRYLLTLARLPELRGDDVSECTSLVQALLDDNAYAYQNIGIIRADGTIPCQA-----SGL--RPIFFDDHPDNLRAALAAGDMTI 453
+S L RW FP+ H+LRFRL +LV++ASLPA+GLL YT +QQRDDAL GQ EA+ L LAA+DQ R+ DQ + L T+ARLPE+RG++ +C+ L+ L++ N + N+G++ D ++ C A GL P F +D A AA D+ I
Sbjct: 4 LSGLIRWLSRFPFFHSLRFRLTLLVLLASLPAIGLLLYTANQQRDDALAEGQLEAIRLVRLAAIDQRRIFDQAEQLLTTVARLPEVRGNNADQCSMLMAELIEANRE-FNNLGVLNRDQSLFCSAVEGSAGGLLRNPQFAED-------AFAADDVVI 153
BLAST of mRNA_P-wetherbeei_contig52264.1.1 vs. uniprot
Match: A0A7V8WT06_9CHLR (Ester cyclase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8WT06_9CHLR) HSP 1 Score: 108 bits (270), Expect = 8.680e-25 Identity = 58/120 (48.33%), Postives = 81/120 (67.50%), Query Frame = 1
Query: 16 RWYRDFPYIHTLRFRLVMLVVVASLPALGLLYYTVSQQRDDALDAGQAEAVNLANLAAVDQERLIDQTRRYLLTLARLPELRGDDVSECTSLVQALLDDNAYAYQNIGIIRADGTIPCQA 375
RW H+LR RL +LV++A+LPALGLL T S+QR DA+ AGQ+EA +A LAA +Q+ LIDQTR L TLARLPE++ D+++C+ L L+ + Y N+G++ DG + C A
Sbjct: 9 RWLAGTSAAHSLRVRLTLLVLLAALPALGLLLLTASEQRTDAIAAGQSEARRVARLAAANQDGLIDQTRLLLNTLARLPEVQASDLTQCSPLFTNLIVADPR-YTNLGVVDGDGALACSA 127
BLAST of mRNA_P-wetherbeei_contig52264.1.1 vs. uniprot
Match: A0A7X8CGK2_9DELT (HAMP domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7X8CGK2_9DELT) HSP 1 Score: 93.2 bits (230), Expect = 3.390e-19 Identity = 63/141 (44.68%), Postives = 86/141 (60.99%), Query Frame = 1
Query: 49 LRFRLVMLVVVASLPALGLLYYTVSQQRDDALDAGQAEAVNLANLAAVDQERLIDQTRRYLLTLARLPELRGDDVSECTSLVQALLDDNAYAYQNIGIIRADGTIPCQASGLR-PIFFDDHPDNLRAAL----AAGDMTIS 456
LRFRL++LV +A LPALG + Y+ S+QR AG+ EA+ LA LAA +Q RLI+ TR+ L+ LA+LP +R D +C +L AL+ ++ Y N+G I ADG + C A + PI +D RA L A GD IS
Sbjct: 8 LRFRLILLVTIAILPALGGVIYSASKQRQWMGKAGELEALRLARLAATEQNRLIEGTRQMLIVLAQLPMVRERDSEKCNALFGALVAESPL-YGNLGAIEADGHLFCGAFPVNEPIDTEDLTYFKRALLDRDFAIGDFHIS 147
BLAST of mRNA_P-wetherbeei_contig52264.1.1 vs. uniprot
Match: A0A3D0CUJ6_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3D0CUJ6_9CHLR) HSP 1 Score: 90.1 bits (222), Expect = 4.510e-18 Identity = 56/144 (38.89%), Postives = 85/144 (59.03%), Query Frame = 1
Query: 31 FPYIHTLRFRLVMLVVVASLPALGLLYYTVSQQRDDALDAGQAEAVNLANLAAVDQERLIDQTRRYLLTLARLPELRGDDVSECTSLVQALL-DDNAYAYQNIGIIRADGTIPCQASGLRPIFFDDHPDNLRAALAAGDMTISD 459
FP+ +LR R+++LVV+A+LPALGL Y ++QR A Q + LA LAA D ERLI+ TR+ L TLA+LPE+R D + C +L+ LL DD+ YA + ++ +G + CQ + + + R AL D+ + +
Sbjct: 4 FPFA-SLRARVILLVVLAALPALGLTRYARTEQRRQAAANVQGDTQRLARLAAADHERLIEGTRQLLSTLAQLPEVRRGDAAACVALLTGLLQDDSPYAL--LAVVDPEGNVLCQGASPSALAAVVDDASFRRALQTRDVAVGE 144
BLAST of mRNA_P-wetherbeei_contig52264.1.1 vs. uniprot
Match: A0A3N5G458_9BACT (Hybrid sensor histidine kinase/response regulator (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3N5G458_9BACT) HSP 1 Score: 84.0 bits (206), Expect = 1.530e-17 Identity = 53/143 (37.06%), Postives = 81/143 (56.64%), Query Frame = 1
Query: 31 FPYIHTLRFRLVMLVVVASLPALGLLYYTVSQQRDDALDAGQAEAVNLANLAAVDQERLIDQTRRYLLTLARLPELRGDDVSECTSLVQALLDDNAYAYQNIGIIRADGTIPCQASGLRPIFFDDHPDNLRAALAAGDMTISD 459
+P + +LR RL++LVV+A +P LGL YT ++R Q A+ L+ L + D ERLI+ RR L+TL+RL +R + + CT+L LL ++ +Y N+G+I ADG I C A ++ D R A+ D I +
Sbjct: 3 WPSLSSLRTRLLLLVVLAIIPVLGLTLYTNLEERQLRKALVQEHAMRLSRLVSADYERLIEDARRLLVTLSRLSAVRDLNRAACTALFVDLLAQHS-SYANLGVIDADGNIFCSAVPTEEVYLGDRV-YFRRAIETRDFAIGE 143
BLAST of mRNA_P-wetherbeei_contig52264.1.1 vs. uniprot
Match: A0A1V4VXH7_9FIRM (Histidine kinase n=1 Tax=Pelotomaculum sp. PtaB.Bin104 TaxID=1811693 RepID=A0A1V4VXH7_9FIRM) HSP 1 Score: 87.0 bits (214), Expect = 5.190e-17 Identity = 46/112 (41.07%), Postives = 71/112 (63.39%), Query Frame = 1
Query: 40 IHTLRFRLVMLVVVASLPALGLLYYTVSQQRDDALDAGQAEAVNLANLAAVDQERLIDQTRRYLLTLARLPELRGDDVSECTSLVQALLDDNAYAYQNIGIIRADGTIPCQA 375
I++LR RL+++++ A LPALGL+ YT ++QR L Q A+ L +A+ DQERLI+ ++L +++LPE+R D + C+ L+ LL N Y NI + DGT+ C A
Sbjct: 6 IYSLRTRLLLIILSAVLPALGLILYTAAEQRQMTLVQVQERALQLVRVASNDQERLIEGAHQFLTIVSQLPEVRSGDSASCSMLLADLLKQNPI-YANIALFNLDGTLQCSA 116
BLAST of mRNA_P-wetherbeei_contig52264.1.1 vs. uniprot
Match: A0A3M1P6I4_9CYAN (Histidine kinase n=1 Tax=Cyanobacteria bacterium J069 TaxID=2420337 RepID=A0A3M1P6I4_9CYAN) HSP 1 Score: 85.9 bits (211), Expect = 1.320e-16 Identity = 47/118 (39.83%), Postives = 71/118 (60.17%), Query Frame = 1
Query: 22 YRDFPYIHTLRFRLVMLVVVASLPALGLLYYTVSQQRDDALDAGQAEAVNLANLAAVDQERLIDQTRRYLLTLARLPELRGDDVSECTSLVQALLDDNAYAYQNIGIIRADGTIPCQA 375
YR +P + +L+ RLV+LV++A +PALG++ +T S QR A Q + +A +Q++ + TR+ L TLA LPE+R DD C L+ LLD N AY +G+ A+G + C A
Sbjct: 5 YRRYPQLLSLKARLVLLVLLAVVPALGMVLHTASIQRRHAEQQVQENLLRFTKFSAANQKQATEATRQLLATLAELPEIRSDDGDSCDRLLNQLLD-NYTAYAALGVADANGNVRCSA 121
BLAST of mRNA_P-wetherbeei_contig52264.1.1 vs. uniprot
Match: A0A521QWE5_9BACT (Histidine kinase n=1 Tax=bacterium TaxID=1869227 RepID=A0A521QWE5_9BACT) HSP 1 Score: 85.5 bits (210), Expect = 1.800e-16 Identity = 55/139 (39.57%), Postives = 80/139 (57.55%), Query Frame = 1
Query: 46 TLRFRLVMLVVVASLPALGLLYYTVSQQRDDALDAGQAEAVNLANLAAVDQERLIDQTRRYLLTLARLPELRGDDVSECTSLVQALLDDNAYAYQNIGIIRADGTIPCQASGLR-PIFFDDHPDNLRAALAAGDMTISD 459
+LR RLV+LV+ A +PALGL+ YT S+QR A QA A+ LA + Q+ L + R+ L+ LA++P +RGD+ +EC SL L+ A +Y N+G++ G I C L P+ D R AL + D+ I D
Sbjct: 8 SLRVRLVLLVLFAVIPALGLILYTASEQRRAAAGEAQANALRLAQSVSSTQDDLFEGARQLLIALAQVPMVRGDNPAECNSLFSVLVKKYA-SYTNLGVVTPAGDIFCSGLPLPGPVNVADRA-WFRRALESRDLVIGD 144
BLAST of mRNA_P-wetherbeei_contig52264.1.1 vs. uniprot
Match: UPI001BBEED50 (PAS domain S-box protein n=1 Tax=Syntrophaceae bacterium TaxID=2052184 RepID=UPI001BBEED50) HSP 1 Score: 84.7 bits (208), Expect = 3.180e-16 Identity = 45/112 (40.18%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 40 IHTLRFRLVMLVVVASLPALGLLYYTVSQQRDDALDAGQAEAVNLANLAAVDQERLIDQTRRYLLTLARLPELRGDDVSECTSLVQALLDDNAYAYQNIGIIRADGTIPCQA 375
+ +LR RL+++VV+A++PALGL++Y +QR A+ +A+ LA +AA QE +I+ TR L TLA +PE+R + +C +L+ LL Y Y N+G+ DG C A
Sbjct: 6 LRSLRARLILIVVIAAVPALGLIFYNTLEQRKSAIHEAHEDALRLARIAAHRQEEIIEDTRLILTTLALVPEVRVLNQKKCNALMADLLKKYPY-YANLGVAGLDGHTACNA 116 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52264.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52264.1.1 >prot_P-wetherbeei_contig52264.1.1 ID=prot_P-wetherbeei_contig52264.1.1|Name=mRNA_P-wetherbeei_contig52264.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bp MSTLARWYRDFPYIHTLRFRLVMLVVVASLPALGLLYYTVSQQRDDALDAback to top mRNA from alignment at P-wetherbeei_contig52264:79..537+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52264.1.1 ID=mRNA_P-wetherbeei_contig52264.1.1|Name=mRNA_P-wetherbeei_contig52264.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=459bp|location=Sequence derived from alignment at P-wetherbeei_contig52264:79..537+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52264:79..537+ >mRNA_P-wetherbeei_contig52264.1.1 ID=mRNA_P-wetherbeei_contig52264.1.1|Name=mRNA_P-wetherbeei_contig52264.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=459bp|location=Sequence derived from alignment at P-wetherbeei_contig52264:79..537+ (Phaeothamnion wetherbeei SAG_119_79)back to top |