mRNA_P-wetherbeei_contig5224.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5224.3.1 vs. uniprot
Match: A0A835Z354_9STRA (Putative eukaryotic initiation factor 4E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z354_9STRA) HSP 1 Score: 244 bits (622), Expect = 4.040e-79 Identity = 113/164 (68.90%), Postives = 136/164 (82.93%), Query Frame = 1
Query: 25 DRYCFWYKRKGGGSGGGPAASQDYESSIKPISSFKTVERFWSIYNHLQRPEEVPTSTDYHLFKDGIKPAWEDGSNARGGQWTLRLKKGLAGRYWEELLLAVIGEQFDVGNEICGCVVSVRYNEDIISLWNRNADNREATERIRESLRRLLKLPFFIHFEYRRHQ 516
+RYCFWYK+KG ++DYESSIK ++SF+TVE FW IYNHLQRP++VP TDYHLFKDGIKPAWED NARGG W +RLKKGLA R +ELLLA+IGEQFDVGNEICG V+SVRY+ED++ +WNRNADNREA ++IR+ +RR+LKLP F+ EYRRHQ
Sbjct: 28 NRYCFWYKQKGNKQ----LTTEDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASR--QELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQ 185
BLAST of mRNA_P-wetherbeei_contig5224.3.1 vs. uniprot
Match: D0MYJ6_PHYIT (Eukaryotic initiation factor 4E, putative n=11 Tax=Phytophthora TaxID=4783 RepID=D0MYJ6_PHYIT) HSP 1 Score: 229 bits (585), Expect = 7.080e-73 Identity = 105/175 (60.00%), Postives = 132/175 (75.43%), Query Frame = 1
Query: 1 GTDGRCVGDRYCFWYKRKGGGSGGGPAASQDYESSIKPISSFKTVERFWSIYNHLQRPEEVPTSTDYHLFKDGIKPAWEDGSNARGGQWTLRLKKGLAGRYWEELLLAVIGEQFDVGNEICGCVVSVRYNEDIISLWNRNADNREATERIRESLRRLLKLPFFIHFEYRRHQARL 525
GT + + Y FWY ++ S G A S+ YE SIK + FKTV+ FW IYNHL RP ++P + DYHLFK GIKP WED +N RGG+W +RL+KG+A RYWE+L+LA+IGEQFDVGNEICG V+S+RYNEDIISLWNRNADN EA RIR+++R++L LP F+ EY+RH L
Sbjct: 18 GTTETPIQNMYTFWYIKR---STGNKAVSESYEKSIKGLGDFKTVQDFWKIYNHLVRPNDLPNTMDYHLFKTGIKPMWEDSANRRGGKWMVRLRKGIASRYWEDLVLAIIGEQFDVGNEICGAVISIRYNEDIISLWNRNADNNEACYRIRDTMRKVLNLPQFVALEYKRHDTSL 189
BLAST of mRNA_P-wetherbeei_contig5224.3.1 vs. uniprot
Match: A0A3M6VVF3_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVF3_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.220e-72 Identity = 103/165 (62.42%), Postives = 128/165 (77.58%), Query Frame = 1
Query: 31 YCFWYKRKGGGSGGGPAASQDYESSIKPISSFKTVERFWSIYNHLQRPEEVPTSTDYHLFKDGIKPAWEDGSNARGGQWTLRLKKGLAGRYWEELLLAVIGEQFDVGNEICGCVVSVRYNEDIISLWNRNADNREATERIRESLRRLLKLPFFIHFEYRRHQARL 525
Y FWY ++ + G A S+ YE SIK + FKTV+ FW IYNHL RP ++P + DYHLFK GIKP WED +N RGG+W +RL+KG+A RYWE+L+LA+IGEQFDVGNEICG V+SVRYNEDIISLWNRNADN EA RIR+++R++L LP F+ EY+RH L
Sbjct: 2 YSFWYIKR---TTGNKAVSESYEKSIKGLGEFKTVQDFWRIYNHLMRPNDLPNTMDYHLFKTGIKPMWEDSANRRGGKWMVRLRKGIASRYWEDLVLAIIGEQFDVGNEICGAVISVRYNEDIISLWNRNADNNEACYRIRDTMRKVLNLPQFVALEYKRHDMSL 163
BLAST of mRNA_P-wetherbeei_contig5224.3.1 vs. uniprot
Match: A0A6G0XTE8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTE8_9STRA) HSP 1 Score: 230 bits (587), Expect = 1.680e-72 Identity = 103/165 (62.42%), Postives = 128/165 (77.58%), Query Frame = 1
Query: 31 YCFWYKRKGGGSGGGPAASQDYESSIKPISSFKTVERFWSIYNHLQRPEEVPTSTDYHLFKDGIKPAWEDGSNARGGQWTLRLKKGLAGRYWEELLLAVIGEQFDVGNEICGCVVSVRYNEDIISLWNRNADNREATERIRESLRRLLKLPFFIHFEYRRHQARL 525
YCFWY +K SG + YE SIK I F+TV+ FW +YNHL RP ++P +TDYHLFK GIKP WED +N RGG+W +R++KG+A RYWE+L+LA+IGEQFDVGNEICG V+S+RYNEDIISLWNRNADN EA RIR+++R+LL LP F+ EY+RH L
Sbjct: 26 YCFWYMKKN--SGKTLDDQESYEKSIKEIGEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKSGIKPMWEDAANRRGGKWMIRIRKGIASRYWEDLVLAIIGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKLLNLPQFVSLEYKRHDTSL 188
BLAST of mRNA_P-wetherbeei_contig5224.3.1 vs. uniprot
Match: A0A485LDV3_9STRA (Aste57867_20004 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDV3_9STRA) HSP 1 Score: 230 bits (587), Expect = 1.950e-72 Identity = 100/165 (60.61%), Postives = 128/165 (77.58%), Query Frame = 1
Query: 31 YCFWYKRKGGGSGGGPAASQDYESSIKPISSFKTVERFWSIYNHLQRPEEVPTSTDYHLFKDGIKPAWEDGSNARGGQWTLRLKKGLAGRYWEELLLAVIGEQFDVGNEICGCVVSVRYNEDIISLWNRNADNREATERIRESLRRLLKLPFFIHFEYRRHQARL 525
YCFWY +K G ++ YE SIK + F+TV+ FW +YNHL RP ++P +TDYHLFK GIKP WED +N RGG+W +R++KG+A RYWE+L+LA++GEQFDVGNEICG V+S+RYNEDIISLWNRNADN EA RIR+++R+LL LP F+ EY+RH L
Sbjct: 26 YCFWYMKKNSGK------TESYEKSIKELGEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKAGIKPMWEDAANRRGGKWMIRIRKGIASRYWEDLVLAIVGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKLLNLPQFVSLEYKRHDTSL 184
BLAST of mRNA_P-wetherbeei_contig5224.3.1 vs. uniprot
Match: A0A1V9Z309_9STRA (Eukaryotic initiation factor 4E n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z309_9STRA) HSP 1 Score: 228 bits (582), Expect = 2.150e-72 Identity = 104/168 (61.90%), Postives = 131/168 (77.98%), Query Frame = 1
Query: 31 YCFWYKRKGGGSGGGPAASQD---YESSIKPISSFKTVERFWSIYNHLQRPEEVPTSTDYHLFKDGIKPAWEDGSNARGGQWTLRLKKGLAGRYWEELLLAVIGEQFDVGNEICGCVVSVRYNEDIISLWNRNADNREATERIRESLRRLLKLPFFIHFEYRRHQARL 525
YCFWY +K + GG AA D YE SIK + FKTV+ FW +Y+HL RP ++P +TDYHLFK GIKP WED +N RGG+W +R++KG++ RYWE+L+LA+IGEQFDVGNEICG V+S+RYNEDIISLWNRNADN EA RIR+++R+LL LP F+ EY+RH L
Sbjct: 11 YCFWYMKK---NTGGKAALDDQESYEKSIKELGEFKTVQGFWRLYDHLIRPNDLPNTTDYHLFKAGIKPMWEDAANRRGGKWMIRIRKGISSRYWEDLVLAIIGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKLLNLPQFVVLEYKRHDTSL 175
BLAST of mRNA_P-wetherbeei_contig5224.3.1 vs. uniprot
Match: G4YG94_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YG94_PHYSP) HSP 1 Score: 228 bits (581), Expect = 2.450e-72 Identity = 103/165 (62.42%), Postives = 128/165 (77.58%), Query Frame = 1
Query: 31 YCFWYKRKGGGSGGGPAASQDYESSIKPISSFKTVERFWSIYNHLQRPEEVPTSTDYHLFKDGIKPAWEDGSNARGGQWTLRLKKGLAGRYWEELLLAVIGEQFDVGNEICGCVVSVRYNEDIISLWNRNADNREATERIRESLRRLLKLPFFIHFEYRRHQARL 525
Y FWY ++ S G A S+ YE SIK + FKTV+ FW IYNHL RP ++P + DYHLFK GIKP WED +N RGG+W +RL+KG+A RYWE+L+LA+IGEQFDVGNEICG V+S+RYNEDIISLWNRNADN EA RIR+++R++L LP F+ EY+RH L
Sbjct: 22 YSFWYIKR---STGNKAVSESYEKSIKGLGDFKTVQDFWKIYNHLVRPNDLPNTMDYHLFKTGIKPMWEDPANRRGGKWMVRLRKGIASRYWEDLVLAIIGEQFDVGNEICGAVISIRYNEDIISLWNRNADNNEACYRIRDTMRKVLNLPQFVALEYKRHDTSL 183
BLAST of mRNA_P-wetherbeei_contig5224.3.1 vs. uniprot
Match: K3WQE2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQE2_GLOUD) HSP 1 Score: 230 bits (586), Expect = 2.760e-72 Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 1
Query: 31 YCFWYKRKGGGSGGGPAASQDYESSIKPISSFKTVERFWSIYNHLQRPEEVPTSTDYHLFKDGIKPAWEDGSNARGGQWTLRLKKGLAGRYWEELLLAVIGEQFDVGNEICGCVVSVRYNEDIISLWNRNADNREATERIRESLRRLLKLPFFIHFEYRRHQARL 525
Y FWY ++ G+ ++ YE SIK I FKTV+ FW IYNHL RP ++P + DYHLFK GIKP WEDG+N RGG+W +RL+KG+A RYWE+L+LA++GEQFDVGNEICG V+SVRYNEDIISLWNRNADN EA RIR+++R++L LP FI EY+RH A L
Sbjct: 31 YSFWYIKRNTGN-----KAESYEKSIKEIGEFKTVQGFWRIYNHLMRPNDLPNTMDYHLFKTGIKPMWEDGANRRGGKWMVRLRKGIASRYWEDLVLAIVGEQFDVGNEICGAVISVRYNEDIISLWNRNADNNEALYRIRDTMRKVLNLPQFIALEYKRHDASL 190
BLAST of mRNA_P-wetherbeei_contig5224.3.1 vs. uniprot
Match: A0A6A4EQT1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4EQT1_9STRA) HSP 1 Score: 227 bits (578), Expect = 7.190e-72 Identity = 101/165 (61.21%), Postives = 128/165 (77.58%), Query Frame = 1
Query: 31 YCFWYKRKGGGSGGGPAASQDYESSIKPISSFKTVERFWSIYNHLQRPEEVPTSTDYHLFKDGIKPAWEDGSNARGGQWTLRLKKGLAGRYWEELLLAVIGEQFDVGNEICGCVVSVRYNEDIISLWNRNADNREATERIRESLRRLLKLPFFIHFEYRRHQARL 525
Y FWY ++ G+ A S+ YE SIK + FKTV+ FW IYNHL RP ++P + DYHLFK GIKP WED +N RGG+W +RL+KG+A RYWE+L+LA++GEQFDVGNEICG V+S+RYNEDIISLWNRNADN EA RIR+++R++L LP F+ EY+RH L
Sbjct: 22 YSFWYIKRNTGN---KAVSESYEKSIKGLGDFKTVQDFWKIYNHLVRPNDLPNTMDYHLFKTGIKPMWEDAANRRGGKWMVRLRKGIASRYWEDLVLAIVGEQFDVGNEICGAVISIRYNEDIISLWNRNADNNEACYRIRDTMRKVLNLPQFVALEYKRHDMSL 183
BLAST of mRNA_P-wetherbeei_contig5224.3.1 vs. uniprot
Match: A0A6A3Y2T3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Y2T3_9STRA) HSP 1 Score: 227 bits (578), Expect = 7.420e-72 Identity = 101/165 (61.21%), Postives = 128/165 (77.58%), Query Frame = 1
Query: 31 YCFWYKRKGGGSGGGPAASQDYESSIKPISSFKTVERFWSIYNHLQRPEEVPTSTDYHLFKDGIKPAWEDGSNARGGQWTLRLKKGLAGRYWEELLLAVIGEQFDVGNEICGCVVSVRYNEDIISLWNRNADNREATERIRESLRRLLKLPFFIHFEYRRHQARL 525
Y FWY ++ G+ A S+ YE SIK + FKTV+ FW IYNHL RP ++P + DYHLFK GIKP WED +N RGG+W +RL+KG+A RYWE+L+LA++GEQFDVGNEICG V+S+RYNEDIISLWNRNADN EA RIR+++R++L LP F+ EY+RH L
Sbjct: 22 YSFWYIKRNTGN---KAVSESYEKSIKGLGDFKTVQDFWKIYNHLVRPNDLPNTMDYHLFKTGIKPMWEDAANRRGGKWMVRLRKGIASRYWEDLVLAIVGEQFDVGNEICGAVISIRYNEDIISLWNRNADNNEACYRIRDTMRKVLNLPQFVALEYKRHDMSL 183 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5224.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5224.3.1 >prot_P-wetherbeei_contig5224.3.1 ID=prot_P-wetherbeei_contig5224.3.1|Name=mRNA_P-wetherbeei_contig5224.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=184bp GTDGRCVGDRYCFWYKRKGGGSGGGPAASQDYESSIKPISSFKTVERFWSback to top mRNA from alignment at P-wetherbeei_contig5224:2433..3652+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5224.3.1 ID=mRNA_P-wetherbeei_contig5224.3.1|Name=mRNA_P-wetherbeei_contig5224.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1220bp|location=Sequence derived from alignment at P-wetherbeei_contig5224:2433..3652+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5224:2433..3652+ >mRNA_P-wetherbeei_contig5224.3.1 ID=mRNA_P-wetherbeei_contig5224.3.1|Name=mRNA_P-wetherbeei_contig5224.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=552bp|location=Sequence derived from alignment at P-wetherbeei_contig5224:2433..3652+ (Phaeothamnion wetherbeei SAG_119_79)back to top |