mRNA_P-wetherbeei_contig51189.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51189.1.1 vs. uniprot
Match: A0A7C4TXN2_9HYPH (Peroxiredoxin n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TXN2_9HYPH) HSP 1 Score: 186 bits (471), Expect = 5.030e-57 Identity = 93/158 (58.86%), Postives = 110/158 (69.62%), Query Frame = 1
Query: 1 GRSILFFYTWTGRPGVPNPPGWDEIPGAHGSTPELEGIRNLATSFASLDTAVYAVSTQTTDWQKELAARLDLNFEVLSDAGLAFARALRLPMFETGGQIGGQTGRMTCY-RRLTLSLVDGHIDWVFYPVHPPDAHARDVLAWLTDHVGYALEGRINPG 471
GR++ F Y WTGRPG+P+PPGWD IPGAHGS+ E EG R+L ++FA+LDTAV VSTQ+TD+Q ELA RL L + + SDA A AL+LP FETGG T Y +RLTL L DG I+ VFYPVHPPD HAR+VLAWL GY E R G
Sbjct: 44 GRTVAFIYPWTGRPGLPDPPGWDAIPGAHGSSAEAEGFRDLHSAFAALDTAVIGVSTQSTDYQSELAERLRLGYPLASDAAFALVGALKLPTFETGG---------TRYLKRLTLVLRDGRIEHVFYPVHPPDTHAREVLAWLAARAGYGAEARPRGG 192
BLAST of mRNA_P-wetherbeei_contig51189.1.1 vs. uniprot
Match: A0A2W4N0F1_9PROT (Peroxiredoxin n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4N0F1_9PROT) HSP 1 Score: 176 bits (445), Expect = 5.020e-53 Identity = 86/156 (55.13%), Postives = 108/156 (69.23%), Query Frame = 1
Query: 1 GRSILFFYTWTGRPGVPNPPGWDEIPGAHGSTPELEGIRNLATSFASLDTAVYAVSTQTTDWQKELAARLDLNFEVLSDAGLAFARALRLPMFETGGQIGGQTGRMTCYRRLTLSLVDGHIDWVFYPVHPPDAHARDVLAWLTDHVGYALEGRINP 468
GR+++F Y WTGRPGVPNPP WDEIPGAHGSTPE EG R+L F + TAV+ +S Q T+ Q+E A RL L FE+LSDA ALRLP+FETGG+ +RLT+ L DGH++ V+YPVHPP+ HAR+VLA++T Y E R+ P
Sbjct: 43 GRAVVFCYPWTGRPGVPNPPNWDEIPGAHGSTPEAEGFRDLYLGFEEMPTAVFGLSMQPTEEQQEFATRLRLPFELLSDAEGRLRDALRLPVFETGGR--------QYLKRLTMILRDGHLEHVYYPVHPPNTHAREVLAYVTATATYEEESRLRP 190
BLAST of mRNA_P-wetherbeei_contig51189.1.1 vs. uniprot
Match: A0A6N6STP6_9HYPH (Peroxiredoxin n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6STP6_9HYPH) HSP 1 Score: 166 bits (419), Expect = 2.940e-49 Identity = 79/142 (55.63%), Postives = 100/142 (70.42%), Query Frame = 1
Query: 1 GRSILFFYTWTGRPGVPNPPGWDEIPGAHGSTPELEGIRNLATSFASLDTAVYAVSTQTTDWQKELAARLDLNFEVLSDAGLAFARALRLPMFETGGQIGGQTGRMTCYRRLTLSLVDGHIDWVFYPVHPPDAHARDVLAWL 426
GR +++ Y WTGRPG+ NPPGWD+IPGAHGSTP+ EG RNL F +D V+ +STQ++D Q+EL RL + FE++SDAG A A AL LP F TGG +T +RLTL L DG I+ VFYPV P++HAR+V AWL
Sbjct: 43 GRVVVYCYPWTGRPGLDNPPGWDDIPGAHGSTPQTEGFRNLYDGFRQVDAEVFGLSTQSSDHQRELVERLGVPFEIVSDAGFALAEALSLPTFTTGG--------VTYLKRLTLGLNDGRIERVFYPVRSPNSHAREVCAWL 176
BLAST of mRNA_P-wetherbeei_contig51189.1.1 vs. uniprot
Match: A0A1E4CVR0_9HYPH (Peroxiredoxin n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A1E4CVR0_9HYPH) HSP 1 Score: 165 bits (418), Expect = 4.440e-49 Identity = 82/146 (56.16%), Postives = 97/146 (66.44%), Query Frame = 1
Query: 1 GRSILFFYTWTGRPGVPNPPGWDEIPGAHGSTPELEGIRNLATSFASLDTAVYAVSTQTTDWQKELAARLDLNFEVLSDAGLAFARALRLPMFETGGQIGGQTGRMTCYRRLTLSLVDGHIDWVFYPVHPPDAHARDVLAWLTDHV 438
G +ILF Y WTGRPG NPP WD+IPGAHGSTPE EG RNL +F VY +S QTTDWQ+EL RL L FE++SDA +AL+LP FETGG + RLTL++ +G I FYPVHPPDAH R+VLAW + V
Sbjct: 43 GWTILFVYPWTGRPGGENPPNWDDIPGAHGSTPEAEGFRNLYRAFEQSQARVYGLSAQTTDWQQELVERLGLPFEIVSDAEGRLRQALKLPTFETGGVV--------YLTRLTLAIHEGRIVRTFYPVHPPDAHPREVLAWFNELV 180
BLAST of mRNA_P-wetherbeei_contig51189.1.1 vs. uniprot
Match: A0A3N5N5G1_9HYPH (Peroxiredoxin n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5N5G1_9HYPH) HSP 1 Score: 160 bits (404), Expect = 5.360e-47 Identity = 75/142 (52.82%), Postives = 100/142 (70.42%), Query Frame = 1
Query: 1 GRSILFFYTWTGRPGVPNPPGWDEIPGAHGSTPELEGIRNLATSFASLDTAVYAVSTQTTDWQKELAARLDLNFEVLSDAGLAFARALRLPMFETGGQIGGQTGRMTCYRRLTLSLVDGHIDWVFYPVHPPDAHARDVLAWL 426
GRSI++ Y WTGRPG+ NPPGWDEIPGAHGSTP+ EG R+L F + V+ +S+Q + +Q+E+A RL + F +LSDA A RAL LP F TGG +T +R+TL++ +G I+ ++YPVHPP AHAR+V AWL
Sbjct: 42 GRSIVYCYPWTGRPGLANPPGWDEIPGAHGSTPQTEGFRDLYEGFRQVGVEVFGLSSQVSAYQREMAERLGVPFAILSDAAFALQRALSLPTFTTGG--------VTYLKRITLAIKNGAIERIYYPVHPPAAHAREVCAWL 175
BLAST of mRNA_P-wetherbeei_contig51189.1.1 vs. uniprot
Match: A0A1E3W904_9HYPH (Redoxin domain-containing protein n=1 Tax=Methyloceanibacter marginalis TaxID=1774971 RepID=A0A1E3W904_9HYPH) HSP 1 Score: 157 bits (397), Expect = 4.410e-46 Identity = 79/142 (55.63%), Postives = 97/142 (68.31%), Query Frame = 1
Query: 1 GRSILFFYTWTGRPGVPNPPGWDEIPGAHGSTPELEGIRNLATSFASLDTAVYAVSTQTTDWQKELAARLDLNFEVLSDAGLAFARALRLPMFETGGQIGGQTGRMTCYRRLTLSLVDGHIDWVFYPVHPPDAHARDVLAWL 426
GRS++ Y WTGRPG PNPP WD+IPGAHGSTPELEG R+LAT FA DT ++ +S Q+T +Q+EL RL L F +LSD AFA AL LP F TGG+ T +RLTL++ DG I+ VF+PV P H +VL WL
Sbjct: 34 GRSVIAVYPWTGRPGRPNPPNWDDIPGAHGSTPELEGFRDLATRFAERDTRLFGLSLQSTAYQRELVQRLRLPFPILSDREAAFATALALPSFATGGE--------TYLKRLTLAVRDGVIERVFFPVMDPAGHPGEVLCWL 167
BLAST of mRNA_P-wetherbeei_contig51189.1.1 vs. uniprot
Match: A0A7C2LZ12_9HYPH (Peroxiredoxin n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LZ12_9HYPH) HSP 1 Score: 155 bits (393), Expect = 2.490e-45 Identity = 78/142 (54.93%), Postives = 95/142 (66.90%), Query Frame = 1
Query: 1 GRSILFFYTWTGRPGVPNPPGWDEIPGAHGSTPELEGIRNLATSFASLDTAVYAVSTQTTDWQKELAARLDLNFEVLSDAGLAFARALRLPMFETGGQIGGQTGRMTCYRRLTLSLVDGHIDWVFYPVHPPDAHARDVLAWL 426
GR++++ Y WTGRPGVP+PPGWD IPGAHGSTP+ EG R+L F + V+ +STQ+ D+Q ELA RL L F ++SD G A ARAL LP F TGG T RLTL+L DG I+ FYPV P A AR+V AWL
Sbjct: 42 GRAVVYCYPWTGRPGVPDPPGWDAIPGAHGSTPQSEGYRDLYAGFRQVGAEVFGLSTQSVDYQSELARRLRLPFRLVSDEGFAVARALALPTFSTGGT--------TYLVRLTLALCDGRIERAFYPVAQPAADAREVCAWL 175
BLAST of mRNA_P-wetherbeei_contig51189.1.1 vs. uniprot
Match: A0A0D6JHS0_9HYPH (Redoxin n=2 Tax=Filomicrobium TaxID=119044 RepID=A0A0D6JHS0_9HYPH) HSP 1 Score: 155 bits (393), Expect = 2.810e-45 Identity = 78/140 (55.71%), Postives = 93/140 (66.43%), Query Frame = 1
Query: 1 GRSILFFYTWTGRPGVPNPPGWDEIPGAHGSTPELEGIRNLATSFASLDTAVYAVSTQTTDWQKELAARLDLNFEVLSDAGLAFARALRLPMFETGGQIGGQTGRMTCY-RRLTLSLVDGHIDWVFYPVHPPDAHARDVL 417
GRSI+F Y WTG+PG+PNPPGWD+IPGAHGSTPE EG L ++ +VY +STQ TDWQ E A R+ L F +LSDA AFARAL+LP F+ G T Y RLTL + DG I+ V YPVHPP HA +V
Sbjct: 45 GRSIVFAYPWTGQPGMPNPPGWDDIPGAHGSTPEAEGFAKLYPRLREMEISVYGLSTQDTDWQAEFAERIGLPFPLLSDAEFAFARALKLPTFKAGD---------TSYLARLTLIIADGCIEHVDYPVHPPHTHAHEVF 175
BLAST of mRNA_P-wetherbeei_contig51189.1.1 vs. uniprot
Match: A0A2W4RQ38_9PROT (Peroxiredoxin n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RQ38_9PROT) HSP 1 Score: 154 bits (389), Expect = 5.300e-45 Identity = 79/146 (54.11%), Postives = 97/146 (66.44%), Query Frame = 1
Query: 1 GRSILFFYTWTGRPGVPNPPGWDEIPGAHGSTPELEGIRNLATSFASLDTAVYAVSTQTTDWQKELAARLDLNFEVLSDAGLAFARALRLPMFETGGQIGGQTGRMTCYRRLTLSLVDGHIDWVFYPVHPPDAHARDVLAWLTDHV 438
G ++F Y W GRPGVPNPP WD IPGAHGST E EG R+L FA + A++ +S Q ++ Q+ELA RL L +E+LSDA F AL LP+FETGG+I RLTL L +G ID VFYPVHPP H R+VLA+L+ V
Sbjct: 23 GWVVVFCYPWAGRPGVPNPPNWDNIPGAHGSTAEAEGFRDLHLGFAGMPAALFGLSGQASEEQEELAVRLKLPYELLSDAEGVFRTALNLPVFETGGKI--------YLARLTLVLREGRIDHVFYPVHPPHTHPREVLAFLSARV 160
BLAST of mRNA_P-wetherbeei_contig51189.1.1 vs. uniprot
Match: A0A1E3VL51_9HYPH (Redoxin n=1 Tax=Methyloceanibacter superfactus TaxID=1774969 RepID=A0A1E3VL51_9HYPH) HSP 1 Score: 153 bits (386), Expect = 2.110e-44 Identity = 75/142 (52.82%), Postives = 94/142 (66.20%), Query Frame = 1
Query: 1 GRSILFFYTWTGRPGVPNPPGWDEIPGAHGSTPELEGIRNLATSFASLDTAVYAVSTQTTDWQKELAARLDLNFEVLSDAGLAFARALRLPMFETGGQIGGQTGRMTCYRRLTLSLVDGHIDWVFYPVHPPDAHARDVLAWL 426
GRS+L Y WTGRPG PNPP WD+I GAHGSTPELEG R+L+ A ++A+S QTTD+Q+E RL L F +LSD +F+ A LP F TGG+ + +RLTL L DG ++WVFYPV P HA ++LAWL
Sbjct: 35 GRSVLAVYPWTGRPGQPNPPHWDDIHGAHGSTPELEGFRDLSEEIARHGARIFALSRQTTDYQQEAVERLRLPFPILSDEHGSFSEAFALPSFTTGGE--------SYLKRLTLMLRDGEVEWVFYPVMDPAGHAGEILAWL 168 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51189.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51189.1.1 >prot_P-wetherbeei_contig51189.1.1 ID=prot_P-wetherbeei_contig51189.1.1|Name=mRNA_P-wetherbeei_contig51189.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp GRSILFFYTWTGRPGVPNPPGWDEIPGAHGSTPELEGIRNLATSFASLDTback to top mRNA from alignment at P-wetherbeei_contig51189:1..492+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51189.1.1 ID=mRNA_P-wetherbeei_contig51189.1.1|Name=mRNA_P-wetherbeei_contig51189.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig51189:1..492+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51189:1..492+ >mRNA_P-wetherbeei_contig51189.1.1 ID=mRNA_P-wetherbeei_contig51189.1.1|Name=mRNA_P-wetherbeei_contig51189.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig51189:1..492+ (Phaeothamnion wetherbeei SAG_119_79)back to top |