prot_P-wetherbeei_contig50560.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig50560.1.1
Unique Nameprot_P-wetherbeei_contig50560.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length125
Homology
BLAST of mRNA_P-wetherbeei_contig50560.1.1 vs. uniprot
Match: A0A838UIN9_9CAUL (DEAD/DEAH box helicase n=1 Tax=Caulobacteraceae bacterium TaxID=1978230 RepID=A0A838UIN9_9CAUL)

HSP 1 Score: 234 bits (597), Expect = 3.650e-70
Identity = 116/125 (92.80%), Postives = 122/125 (97.60%), Query Frame = 0
Query:    1 SVPQVRRREEINRFKNDPNCRLFLSTDSGSVGLNLQAASAVINIDLPWNPAKLEQRIARAWRKHQTRAVTVINLVTEGSIEHAILHLLNVKQVLADGLLDGHGDIGALKMPSGRGALVDRMRSML 125
            SVPQ RRREEINRFKNDP+CRLFLSTDSGSVGLNLQAASAV+N+DLPWNPAKLEQRIARAWRK+QTR+VTVINLVTEGSIEHAILHLLNVKQ LADGLLDG GDIGALKMPSGRGAL+DRMRSML
Sbjct:  448 SVPQARRREEINRFKNDPDCRLFLSTDSGSVGLNLQAASAVVNLDLPWNPAKLEQRIARAWRKNQTRSVTVINLVTEGSIEHAILHLLNVKQALADGLLDGRGDIGALKMPSGRGALIDRMRSML 572          
BLAST of mRNA_P-wetherbeei_contig50560.1.1 vs. uniprot
Match: A0A5M6I455_9HYPH (DEAD/DEAH box helicase n=1 Tax=Blastochloris sulfoviridis TaxID=50712 RepID=A0A5M6I455_9HYPH)

HSP 1 Score: 209 bits (531), Expect = 1.940e-60
Identity = 102/125 (81.60%), Postives = 113/125 (90.40%), Query Frame = 0
Query:    1 SVPQVRRREEINRFKNDPNCRLFLSTDSGSVGLNLQAASAVINIDLPWNPAKLEQRIARAWRKHQTRAVTVINLVTEGSIEHAILHLLNVKQVLADGLLDGHGDIGALKMPSGRGALVDRMRSML 125
            SVPQ RRR EI RFKNDP CRLFLSTDSGSVGLNLQ ASAVIN+DLPWNPA+LEQRIARAWRK+QTRAVTV+NLV EGSIEH ILHLL  KQ LADG+LDG GD+ ALKMPSGRGA+V+RM++M+
Sbjct:  595 SVPQQRRRAEITRFKNDPACRLFLSTDSGSVGLNLQVASAVINVDLPWNPARLEQRIARAWRKNQTRAVTVVNLVCEGSIEHGILHLLGQKQALADGVLDGQGDVSALKMPSGRGAMVERMQAMM 719          
BLAST of mRNA_P-wetherbeei_contig50560.1.1 vs. uniprot
Match: A0A1A6FP77_9HYPH (Uncharacterized protein n=4 Tax=Methylocystaceae TaxID=31993 RepID=A0A1A6FP77_9HYPH)

HSP 1 Score: 202 bits (514), Expect = 4.160e-58
Identity = 97/125 (77.60%), Postives = 112/125 (89.60%), Query Frame = 0
Query:    1 SVPQVRRREEINRFKNDPNCRLFLSTDSGSVGLNLQAASAVINIDLPWNPAKLEQRIARAWRKHQTRAVTVINLVTEGSIEHAILHLLNVKQVLADGLLDGHGDIGALKMPSGRGALVDRMRSML 125
            S+PQ RRR EINRFK DP CRLF STDSGSVGLNLQ ASAV+N+DLPWNPAKLEQRIARAWRK+Q R+V+V+NLVTEGSIEH+ILHL+  KQ LADG+LDG GDI ALKMPSGRGA ++RM++M+
Sbjct:  588 SLPQERRRAEINRFKRDPACRLFFSTDSGSVGLNLQVASAVVNVDLPWNPAKLEQRIARAWRKNQPRSVSVVNLVTEGSIEHSILHLIGQKQALADGVLDGAGDISALKMPSGRGAFIERMQAMM 712          
BLAST of mRNA_P-wetherbeei_contig50560.1.1 vs. uniprot
Match: UPI00140A3730 (DEAD/DEAH box helicase n=1 Tax=Methylosinus sp. RM1 TaxID=2583817 RepID=UPI00140A3730)

HSP 1 Score: 202 bits (514), Expect = 5.460e-58
Identity = 97/125 (77.60%), Postives = 112/125 (89.60%), Query Frame = 0
Query:    1 SVPQVRRREEINRFKNDPNCRLFLSTDSGSVGLNLQAASAVINIDLPWNPAKLEQRIARAWRKHQTRAVTVINLVTEGSIEHAILHLLNVKQVLADGLLDGHGDIGALKMPSGRGALVDRMRSML 125
            S+PQ RRR EINRFK DP CRLFLSTDSGSVGLNLQ ASAV+N+DLPWNPAKLEQRIARAWRK+Q R+V V+NLVTEGSIEH+ILHLL  KQ LADG+LDG GD+ ALKMPSGRGA ++RM++++
Sbjct:  588 SLPQERRRAEINRFKRDPACRLFLSTDSGSVGLNLQVASAVVNVDLPWNPAKLEQRIARAWRKNQPRSVAVVNLVTEGSIEHSILHLLGQKQALADGVLDGAGDVSALKMPSGRGAFIERMQAVM 712          
BLAST of mRNA_P-wetherbeei_contig50560.1.1 vs. uniprot
Match: A0A6A8RKV6_9EURY (DEAD/DEAH box helicase (Fragment) n=1 Tax=Methanobacterium sp. TaxID=2164 RepID=A0A6A8RKV6_9EURY)

HSP 1 Score: 194 bits (493), Expect = 5.480e-56
Identity = 95/121 (78.51%), Postives = 106/121 (87.60%), Query Frame = 0
Query:    1 SVPQVRRREEINRFKNDPNCRLFLSTDSGSVGLNLQAASAVINIDLPWNPAKLEQRIARAWRKHQTRAVTVINLVTEGSIEHAILHLLNVKQVLADGLLDGHGDIGALKMPSGRGALVDRM 121
            +VPQ RRR+EI RFKNDP CRLFLSTDSGSVGLNLQ A+AV+N+DLPWNPAKLEQRIARAWRKHQT+ VTV+NLV E SIEH ILHLL  KQ LADG+LDG GDI A+KMPSGR A V+R+
Sbjct:  589 TVPQDRRRQEIRRFKNDPACRLFLSTDSGSVGLNLQVATAVVNMDLPWNPAKLEQRIARAWRKHQTKPVTVVNLVCENSIEHRILHLLGQKQGLADGVLDGRGDIAAIKMPSGRAACVERV 709          
BLAST of mRNA_P-wetherbeei_contig50560.1.1 vs. uniprot
Match: A0A7Z9XD72_9DELT (DEAD/DEAH box helicase (Fragment) n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7Z9XD72_9DELT)

HSP 1 Score: 188 bits (477), Expect = 3.670e-55
Identity = 90/125 (72.00%), Postives = 108/125 (86.40%), Query Frame = 0
Query:    1 SVPQVRRREEINRFKNDPNCRLFLSTDSGSVGLNLQAASAVINIDLPWNPAKLEQRIARAWRKHQTRAVTVINLVTEGSIEHAILHLLNVKQVLADGLLDGHGDIGALKMPSGRGALVDRMRSML 125
            SVPQ +RR+EI RFK+DP+C LFLSTDSGSVGLNLQ ASAV+N+DLPWNPAKLEQRIARAWRKHQT+ V V+N V EGSIEH +L LL  K+ LADG+LDG GD+GA+KMPSGRGA ++R+  ++
Sbjct:  358 SVPQQKRRQEIRRFKDDPDCVLFLSTDSGSVGLNLQEASAVVNLDLPWNPAKLEQRIARAWRKHQTKPVNVVNFVCEGSIEHRMLGLLAQKRQLADGVLDGQGDLGAIKMPSGRGAFLERLEVLM 482          
BLAST of mRNA_P-wetherbeei_contig50560.1.1 vs. uniprot
Match: UPI001F35B6EF (DEAD/DEAH box helicase n=1 Tax=Acidiphilium iwatense TaxID=768198 RepID=UPI001F35B6EF)

HSP 1 Score: 192 bits (487), Expect = 2.170e-54
Identity = 97/125 (77.60%), Postives = 109/125 (87.20%), Query Frame = 0
Query:    1 SVPQVRRREEINRFKNDPNCRLFLSTDSGSVGLNLQAASAVINIDLPWNPAKLEQRIARAWRKHQTRAVTVINLVTEGSIEHAILHLLNVKQVLADGLLDGHGDIGALKMPSGRGALVDRMRSML 125
            SVPQ +RR EI RFK+DP CRLFLSTDSGSVGLNLQ ASAV+N+DLPWNPAKLEQRIARAWRK+QTRAVTVINLV E SIEH I H+L  KQ LADG+LDG GDI ALKMPSGR A+V+R+ ++L
Sbjct:  570 SVPQDKRRIEIRRFKSDPACRLFLSTDSGSVGLNLQVASAVVNMDLPWNPAKLEQRIARAWRKYQTRAVTVINLVCEDSIEHRIQHILVQKQGLADGVLDGRGDIEALKMPSGRAAMVERLAALL 694          
BLAST of mRNA_P-wetherbeei_contig50560.1.1 vs. uniprot
Match: UPI001C9952C9 (DEAD/DEAH box helicase n=1 Tax=Methylosinus sp. Sm6 TaxID=2866948 RepID=UPI001C9952C9)

HSP 1 Score: 191 bits (485), Expect = 4.170e-54
Identity = 93/125 (74.40%), Postives = 106/125 (84.80%), Query Frame = 0
Query:    1 SVPQVRRREEINRFKNDPNCRLFLSTDSGSVGLNLQAASAVINIDLPWNPAKLEQRIARAWRKHQTRAVTVINLVTEGSIEHAILHLLNVKQVLADGLLDGHGDIGALKMPSGRGALVDRMRSML 125
            SV Q RRR EINRFK DP CRLFLSTDSG VGLNLQ ASAVINIDLPWNPAK EQRIARAWRK+Q R+V+V+NLV EG+IEH ILHL+  KQ LADG+LDG GD+  LKMPSGR A ++RM++M+
Sbjct:  594 SVTQERRRAEINRFKRDPACRLFLSTDSGGVGLNLQVASAVINIDLPWNPAKFEQRIARAWRKNQQRSVSVVNLVAEGTIEHNILHLIGQKQALADGVLDGEGDLSELKMPSGRAAFIERMQAMM 718          
BLAST of mRNA_P-wetherbeei_contig50560.1.1 vs. uniprot
Match: A0A5C8PTE3_9HYPH (DEAD/DEAH box helicase n=2 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PTE3_9HYPH)

HSP 1 Score: 190 bits (482), Expect = 1.270e-53
Identity = 95/125 (76.00%), Postives = 109/125 (87.20%), Query Frame = 0
Query:    1 SVPQVRRREEINRFKNDPNCRLFLSTDSGSVGLNLQAASAVINIDLPWNPAKLEQRIARAWRKHQTRAVTVINLVTEGSIEHAILHLLNVKQVLADGLLDGHGDIGALKMPSGRGALVDRMRSML 125
            SVPQ RRR EI RFK DP+CRLFLSTDSGSVGLNLQAAS VIN+DLPWNPA+LEQRIARAWRKHQ R+V VINLVTE SIEH +L LL+ KQ LADG+LDG GD+  L+MPSGRGA+V+R+ ++L
Sbjct:  655 SVPQERRRAEIARFKRDPDCRLFLSTDSGSVGLNLQAASVVINLDLPWNPARLEQRIARAWRKHQHRSVDVINLVTEDSIEHNMLGLLSQKQALADGVLDGAGDLKGLRMPSGRGAMVERIAAVL 779          
BLAST of mRNA_P-wetherbeei_contig50560.1.1 vs. uniprot
Match: A0A2V8MJR2_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8MJR2_9BACT)

HSP 1 Score: 188 bits (478), Expect = 4.410e-53
Identity = 91/125 (72.80%), Postives = 109/125 (87.20%), Query Frame = 0
Query:    1 SVPQVRRREEINRFKNDPNCRLFLSTDSGSVGLNLQAASAVINIDLPWNPAKLEQRIARAWRKHQTRAVTVINLVTEGSIEHAILHLLNVKQVLADGLLDGHGDIGALKMPSGRGALVDRMRSML 125
            SVPQ  RREEINRFKNDP+CRL LS+DSGSVGLNLQAA+ VIN+DLPWNPAKLEQRIARAWRKHQTR V+VINLV E SIEH +L L++ KQ LADG+LDG GD+ ++KMPSGR A ++R++ ++
Sbjct:  612 SVPQKMRREEINRFKNDPDCRLILSSDSGSVGLNLQAANVVINLDLPWNPAKLEQRIARAWRKHQTRPVSVINLVCENSIEHRMLGLMSQKQQLADGVLDGRGDLDSIKMPSGRVAFIERIQELM 736          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig50560.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A838UIN9_9CAUL3.650e-7092.80DEAD/DEAH box helicase n=1 Tax=Caulobacteraceae ba... [more]
A0A5M6I455_9HYPH1.940e-6081.60DEAD/DEAH box helicase n=1 Tax=Blastochloris sulfo... [more]
A0A1A6FP77_9HYPH4.160e-5877.60Uncharacterized protein n=4 Tax=Methylocystaceae T... [more]
UPI00140A37305.460e-5877.60DEAD/DEAH box helicase n=1 Tax=Methylosinus sp. RM... [more]
A0A6A8RKV6_9EURY5.480e-5678.51DEAD/DEAH box helicase (Fragment) n=1 Tax=Methanob... [more]
A0A7Z9XD72_9DELT3.670e-5572.00DEAD/DEAH box helicase (Fragment) n=1 Tax=Desulfob... [more]
UPI001F35B6EF2.170e-5477.60DEAD/DEAH box helicase n=1 Tax=Acidiphilium iwaten... [more]
UPI001C9952C94.170e-5474.40DEAD/DEAH box helicase n=1 Tax=Methylosinus sp. Sm... [more]
A0A5C8PTE3_9HYPH1.270e-5376.00DEAD/DEAH box helicase n=2 Tax=Vineibacter terrae ... [more]
A0A2V8MJR2_9BACT4.410e-5372.80Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 1..64
e-value: 4.2E-5
score: 33.0
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 2..63
e-value: 1.6E-13
score: 50.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..106
score: 12.610236
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..112
e-value: 1.7E-35
score: 124.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..104
NoneNo IPR availablePANTHERPTHR10799SNF2/RAD54 HELICASE FAMILYcoord: 6..91
NoneNo IPR availablePANTHERPTHR10799:SF971RNA POLYMERASE-ASSOCIATED PROTEIN RAPAcoord: 6..91
NoneNo IPR availableCDDcd18793SF2_C_SNFcoord: 1..75
e-value: 1.59006E-31
score: 106.792

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig50560contigP-wetherbeei_contig50560:184..558 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig50560.1.1mRNA_P-wetherbeei_contig50560.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig50560 184..558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig50560.1.1 ID=prot_P-wetherbeei_contig50560.1.1|Name=mRNA_P-wetherbeei_contig50560.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp
SVPQVRRREEINRFKNDPNCRLFLSTDSGSVGLNLQAASAVINIDLPWNP
AKLEQRIARAWRKHQTRAVTVINLVTEGSIEHAILHLLNVKQVLADGLLD
GHGDIGALKMPSGRGALVDRMRSML
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase