mRNA_P-wetherbeei_contig12071.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12071.1.1 vs. uniprot
Match: A0A836CE40_9STRA (Matrin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE40_9STRA) HSP 1 Score: 282 bits (721), Expect = 5.930e-88 Identity = 149/274 (54.38%), Postives = 197/274 (71.90%), Query Frame = 2 Query: 116 TLLERTRAFHEDIEAYERAVIEELKSKPKSHKQRVLQQHRVAALLDEAAERSRGLHDLYKDEDGTLKEEIAAMRGRDALKSFGERTKETLNYHARHPNIQVQNGPDLALDAEARVAFSGEELYGKFFDLHGLFARWINLPQCKDKKLDYLDFLAQLSGPFEALPEAEKARGGGGAGRGAYGRYVGDLGAYLEGFLRRTQPLVDVKDVRAEARCEFEAEWAAGKAPGWPPVAAAAAMGAAA-AAGREPRPLDLSKYRAAEELLPLGMERLKEALE 934 +LLER RAFHEDIE YE A+I+EL++KPK++K+RV QQHRVA LL +A RS+ L +Y+D+D ++K+E+AAMRGRDALK+F +R K + +YHAR+P++ V GP++ + E +V FSGEEL+GK FDLH L+ARW+N PQC DK+LDY +LA L+ + A++++G Y YV DL AYL GFL RTQPLVD ++ EA EF+ W AG+ GWP V+ AA AAA G R LDLS Y AAE+L+PLG++RLKEALE Sbjct: 2 SLLERARAFHEDIETYEMAIIKELEAKPKTNKERVYQQHRVANLLSQAVARSKELDAIYEDKDDSMKQEVAAMRGRDALKNFYDRAKSSWSYHARYPDLPVNTGPNIDEEKEPKVTFSGEELFGKHFDLHDLYARWVNSPQCSDKRLDYGAYLAGLAALGDVPERAKRSKG--------YAGYVADLEAYLRGFLARTQPLVDADEIVKEAEAEFDKAWEAGRVKGWPRVSKAAPHKAAAPGGGLTARHLDLSLYHAAEDLMPLGLDRLKEALE 267
BLAST of mRNA_P-wetherbeei_contig12071.1.1 vs. uniprot
Match: D7FUU5_ECTSI (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUU5_ECTSI) HSP 1 Score: 280 bits (715), Expect = 4.440e-87 Identity = 150/283 (53.00%), Postives = 193/283 (68.20%), Query Frame = 2 Query: 107 MSSTLLERTRAFHEDIEAYERAVIEELKSKPKSHKQRVLQQHRVAALLDEAAERSRGLHDLYKDEDGTLKEEIAAMRGRDALKSFGERTKETLNYHARHPNIQVQNGPDLALDAEARVAFSGEELYGKFFDLHGLFARWINLPQCKDKKLDYLDFLAQLSGPFEALPEAEKARGGGGAGRGAYGRYVGDLGAYLEGFLRRTQPLVDVKDVRAEARCEFEAEWAAGKAPGWPPVAAAAAMGAA-------AAAGREPRPLDLSKYRAAEELLPLGMERLKEALE 934 MSS+LLER R FHED+E YER +I++L++KP++ K+RV QQHR+A L D + ERS+GLH++Y+D DG+++EE+A+MRG+ + +F +R KET +YH HP + V GP+L + E +V FSGEELYGKFFDLHG+F RW+NLPQCKDK+LDY FL L G FE +PE EK RG AY ++ DL YL GFL RTQPLVD+ +V + FE W AG PGW AA AAA PR LDL K+ A+EL LGM+RLKEAL+ Sbjct: 1 MSSSLLERARGFHEDLEIYERGIIDQLETKPRTQKERVAQQHRIANLCDGSTERSQGLHEIYEDTDGSMREEVASMRGQKVMDTFYDRLKETWSYHTHHPGLPVTFGPNLEAETEVKVQFSGEELYGKFFDLHGMFVRWVNLPQCKDKQLDYSQFLQAL-GRFEDIPEQEKLRGK------AYAGFLADLREYLGGFLTRTQPLVDLDEVLGDTDSSFEEAWEAGTLPGWTSGRAAXXXXXXXXXXXXXAAA---PRVLDLKKFHDADELRALGMDRLKEALQ 273
BLAST of mRNA_P-wetherbeei_contig12071.1.1 vs. uniprot
Match: A0A4D9DC70_9STRA (Matrin-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DC70_9STRA) HSP 1 Score: 188 bits (478), Expect = 5.350e-52 Identity = 119/288 (41.32%), Postives = 168/288 (58.33%), Query Frame = 2 Query: 107 MSSTLLERTRAFHEDIEAYERAVIEELKSKPKSHKQRVLQQHRVAALLDEAAERSRGLHDLYKDEDGTLKEEIAAMRGRDALKSFGERTKETLNYHARHPNIQVQNGPDLALDAEARVAFSGEELYGKFFDLHGLFARWINLPQCKDKKLDYLDFLAQLSGPFEALPEAEKARGGGGAGRGAYGRYVGDLGAYLEGFLRRTQPLVDVKDV------------RAEARCEFEAEWAAGKAPGWPPVAAAAAMGAAAAAGRE-PRPLDLSKYRAAEELLPLGMERLKEAL 931 MS LER RA HEDIEAYE A++ L+ KP++ K+RV QQHRV+ L+++ RS+ L +Y+D GT+KEE+A +RGRDA SF R YH +HP++ V++ P + +AE RV FSGEE++GK+ DL + LPQ K DY +L++L+ F +P +K A+ RYV +L YL F++RTQPL++V+++ +A FEA W AGK PG PV A G G E + +DL +R A+EL +GM+RLK L Sbjct: 1 MSGLTLERARANHEDIEAYEAAIVAILEDKPRTAKERVWQQHRVSNLIEQIQGRSKDLEGIYEDLHGTMKEELATLRGRDAFPSFYARVDHAKEYHQKHPDVPVKHHPPVQDEAEPRVCFSGEEVFGKYLDLQASHMEFYALPQTP--KWDYQTYLSRLA-DFSVVPAGKK--------NAAWARYVHNLYNYLLSFIQRTQPLLNVEEILDGNVDGGEEGATKKAEAAFEALWQAGKLPGGWPVPA---QGGGEEKGTENTKEVDLRGFRTAKELEVVGMDRLKAGL 274
BLAST of mRNA_P-wetherbeei_contig12071.1.1 vs. uniprot
Match: A0A7S2W2V2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2V2_9STRA) HSP 1 Score: 182 bits (462), Expect = 1.370e-51 Identity = 116/276 (42.03%), Postives = 157/276 (56.88%), Query Frame = 2 Query: 107 MSSTLLERTRAFHEDIEAYERAVIEELKSKPKSHKQRVLQQHRVAALLDEAAERSRGLHDLYKDEDGTLKEEIAAMRGRDALKSFGERTKETLNYHARHPNIQVQNGPDLALDAEARVAFSGEELYGKFFDLHGLFARWINLPQCKDKKLDYLDFLAQLSGPFEALPEAEKARGGGGAGRGAYGRYVGDLGAYLEGFLRRTQPLVDVKDVRAEARCEFEAEWAAGKAPGWPPVAAAAAMGAAAAAGREPRPLDLSKYRAAEELLPLGMERLKEALE 934 MSSTLLE+ R E EAYE+A+ E+L SKPK+ KQ+V QQH +A L+ ++S ++ KD DG+ KEE+ M+G +A SF E K+T Y+ R PNI+ Q L D E FSGEE++GK+ DLH L R N+ Q +YLD+LA S F +P K GA AY Y+ DL YLE F +R QPLVD + +E F+ W G PGW +A A+ + RP+D+S +A++L LG++RLKE LE Sbjct: 1 MSSTLLEQARQALEYSEAYEKAIGEQLSSKPKTTKQQVWQQHHIANLMTCIKKQSGTALEVVKDGDGSFKEELETMKGANAFGSFYESLKQTREYYMRFPNIKPQQALSLEADMECTTVFSGEEVFGKYLDLHALHERSCNMKQFGPT--EYLDYLAAFS-DFSKVPSGAKM----GA---AYAEYLKDLLDYLESFFQRAQPLVDFASISSERSTAFQEAWEKGTVPGWS-AGSAGTEAASTSNTAAKRPVDMSSMHSAQDLEALGLQRLKEGLE 265
BLAST of mRNA_P-wetherbeei_contig12071.1.1 vs. uniprot
Match: A0A7S2W3N3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3N3_9STRA) HSP 1 Score: 182 bits (462), Expect = 6.950e-50 Identity = 116/276 (42.03%), Postives = 157/276 (56.88%), Query Frame = 2 Query: 107 MSSTLLERTRAFHEDIEAYERAVIEELKSKPKSHKQRVLQQHRVAALLDEAAERSRGLHDLYKDEDGTLKEEIAAMRGRDALKSFGERTKETLNYHARHPNIQVQNGPDLALDAEARVAFSGEELYGKFFDLHGLFARWINLPQCKDKKLDYLDFLAQLSGPFEALPEAEKARGGGGAGRGAYGRYVGDLGAYLEGFLRRTQPLVDVKDVRAEARCEFEAEWAAGKAPGWPPVAAAAAMGAAAAAGREPRPLDLSKYRAAEELLPLGMERLKEALE 934 MSSTLLE+ R E EAYE+A+ E+L SKPK+ KQ+V QQH +A L+ ++S ++ KD DG+ KEE+ M+G +A SF E K+T Y+ R PNI+ Q L D E FSGEE++GK+ DLH L R N+ Q +YLD+LA S F +P K GA AY Y+ DL YLE F +R QPLVD + +E F+ W G PGW +A A+ + RP+D+S +A++L LG++RLKE LE Sbjct: 1 MSSTLLEQARQALEYSEAYEKAIGEQLSSKPKTTKQQVWQQHHIANLMTCIKKQSGTALEVVKDGDGSFKEELETMKGANAFGSFYESLKQTREYYMRFPNIKPQQALSLEADMECTTVFSGEEVFGKYLDLHALHERSCNMKQFGPT--EYLDYLAAFS-DFSKVPSGAKM----GA---AYAEYLKDLLDYLESFFQRAQPLVDFASISSERSTAFQEAWEKGTVPGWS-AGSAGTEAASTSNTAAKRPVDMSSMHSAQDLEALGLQRLKEGLE 265
BLAST of mRNA_P-wetherbeei_contig12071.1.1 vs. uniprot
Match: A0A6G0X0B1_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0B1_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.960e-47 Identity = 102/252 (40.48%), Postives = 145/252 (57.54%), Query Frame = 2 Query: 107 MSSTLLERTRAFHEDIEAYERAVIEELKSKPKSHKQRVLQQHRVAALLDEAAERSRGLHDLYKDEDGTLKEEIAAMRGRDALKSFGERTKETLNYHARHPNIQVQNGPDLALDAEARVAFSGEELYGKFFDLHGLFARWINLP----------------------QCKDKKLDYLDFLAQLSGPFEALPEAEKARGGGGAGRGAYGRYVGDLGAYLEGFLRRTQPLVDVKDVRAEARCEFEAEWAAGKAPGW 796 MSS LE R+ HEDIE+YERA++ L KP++H+ RVL H+++ALLD RS+ LYKDE+GT+KEEI M GR SF ++ K ++H ++PN+QV + P L E + FSGEE +GK+ DLH + +++NLP + K DY+ +L+++ G F + + K A R Y Y+ DL AYL+GF RRTQPLVD+ DV +E +FE +WA + GW Sbjct: 1 MSSHTLELIRSAHEDIESYERAIVAILSEKPRNHRARVLHGHKISALLDCVTVRSQETLKLYKDEEGTMKEEIDTMHGRTIFTSFYDQLKGIRDFHRKYPNVQVTHEPSLDHIMEPDIPFSGEERFGKYLDLHAFYTQYLNLPLFQKVNKKAAADTSNAHRGRTPEYKQVHADYITYLSRI-GDFTKIAQRAKL-----ADR-RYDAYLTDLLAYLQGFYRRTQPLVDLDDVISETNAKFEKDWALHQVRGW 245
BLAST of mRNA_P-wetherbeei_contig12071.1.1 vs. uniprot
Match: A0A024UI91_9STRA (C2H2-type domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UI91_9STRA) HSP 1 Score: 174 bits (442), Expect = 3.550e-47 Identity = 105/252 (41.67%), Postives = 142/252 (56.35%), Query Frame = 2 Query: 107 MSSTLLERTRAFHEDIEAYERAVIEELKSKPKSHKQRVLQQHRVAALLDEAAERSRGLHDLYKDEDGTLKEEIAAMRGRDALKSFGERTKETLNYHARHPNIQVQNGPDLALDAEARVAFSGEELYGKFFDLHGLFARWINLP--QCKDKKL--------------------DYLDFLAQLSGPFEALPEAEKARGGGGAGRGAYGRYVGDLGAYLEGFLRRTQPLVDVKDVRAEARCEFEAEWAAGKAPGW 796 MSS LE+ RA HEDIE YERA++ L KP++H+ RVL H+V+ LLD RS LYKDE+GTLKEEI M GR SF ++ K ++H ++ NIQV + P L ++FSGEE +GK+ DLH + +++NLP Q +KK DY+ +L+++ G F +P+ K G Y Y+ DL AYL F RRTQPLVDV DV E + F+ +WAA + GW Sbjct: 1 MSSHTLEQIRAAHEDIETYERAIVSILSEKPRNHRARVLHGHKVSNLLDCVTVRSADALKLYKDEEGTLKEEIDTMHGRTIFTSFYDQLKAMRDFHRKYTNIQVSHEPALDHVMNPEISFSGEERFGKYLDLHAFYTQYLNLPLFQTVNKKAAADTANVVRGRTPEYKQVHADYITYLSRV-GDFTKIPQRAKL------GDQRYETYLKDLVAYLLSFYRRTQPLVDVDDVMQETKVTFDKDWAARRVRGW 245
BLAST of mRNA_P-wetherbeei_contig12071.1.1 vs. uniprot
Match: A0A485LPB3_9STRA (Aste57867_23637 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPB3_9STRA) HSP 1 Score: 174 bits (442), Expect = 3.550e-47 Identity = 102/252 (40.48%), Postives = 143/252 (56.75%), Query Frame = 2 Query: 107 MSSTLLERTRAFHEDIEAYERAVIEELKSKPKSHKQRVLQQHRVAALLDEAAERSRGLHDLYKDEDGTLKEEIAAMRGRDALKSFGERTKETLNYHARHPNIQVQNGPDLALDAEARVAFSGEELYGKFFDLHGLFARWINLP--QCKDKKL--------------------DYLDFLAQLSGPFEALPEAEKARGGGGAGRGAYGRYVGDLGAYLEGFLRRTQPLVDVKDVRAEARCEFEAEWAAGKAPGW 796 MSS LE R+ HED+E+YERA++ L KP++H+ RVL H+V+ALLD RS LYKDE+GT+KEEI M GR SF ++ K ++H ++PNIQV + P L E + FSGEE +GK+ DLH + +++NLP Q +KK DY+ +L ++ G F + + K Y Y+ +L AYL GF RRTQPLVD+ DV +E + +FE +WA + GW Sbjct: 1 MSSHTLELIRSAHEDVESYERAIVAILNEKPRNHRTRVLHGHKVSALLDSVTVRSSETLKLYKDEEGTMKEEIDMMHGRTIFTSFYDQLKGIRDFHRKYPNIQVTHEPKLDHIMEPEIPFSGEERFGKYLDLHAFYTQYLNLPLFQTVNKKAAADTLTAQRGRTPEYKQVHADYITYLGRV-GDFAKISQRAKLADQ------RYDTYLRELLAYLSGFYRRTQPLVDLDDVLSETKAKFEKDWALHRVRGW 245
BLAST of mRNA_P-wetherbeei_contig12071.1.1 vs. uniprot
Match: A0A2P6U481_CHLSO (Splicing factor 3A subunit 3 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U481_CHLSO) HSP 1 Score: 171 bits (434), Expect = 7.080e-46 Identity = 121/282 (42.91%), Postives = 160/282 (56.74%), Query Frame = 2 Query: 107 MSSTLLERTRAFHEDIEAYERAVIEELKSKPK-SHKQRVLQQHRVAALLDEAAERSRGLHDLYKDEDGTLKEEIAAMR--GRD-ALKSFGERTKETLNYHARHPN---IQVQNGPDLALDAEARVAFSGEELYGKFFDLHGLFARWINLPQCKDKKLDYLDFLAQLSGPFEALPEAEKARGGGGAGRGAYGRYVGDLGAYLEGFLRRTQPLVDVKDVRAEARCEFEAEWAAGKAPGWPPVAAAAAMGAAAAAGREPRPLDLSKYRAAEELLPLGMERLKEAL 931 M+STLLE TR H+D+E ER ++++ ++P SHK ++LQ HRV A+LD ERSR L +Y DEDG KEEIA +R G D +F ER KE YH + PN + +N L +A A V FSGEE G+F DLH LF + N K++DY ++ ++ FEA+P A++ GR Y Y+ L AYLE F RTQPL + + EF +W AG+ GW + GAAAAA LDL + +A+EL LG ERLKEAL Sbjct: 1 MASTLLEETRQAHDDVERLERLIVKDFATQPAGSHKDKLLQSHRVRAMLDSIQERSRKLIRIYDDEDGARKEEIAQLRLGGADNVFSNFYERLKEVREYHRKFPNDDLTEAENDEALLSEAPA-VPFSGEEAMGRFLDLHELFHTYTNSKF--GKQVDYYTYVCSIA-EFEAIPRAQRL------GR-PYREYLQALVAYLESFYERTQPLSQLSRQYEKLEAEFAEKWQAGQVAGWEDRGEGGS-GAAAAADGSSGALDLDAFDSADELEMLGAERLKEAL 270
BLAST of mRNA_P-wetherbeei_contig12071.1.1 vs. uniprot
Match: A0A087SEV3_AUXPR (Splicing factor 3A subunit 3 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SEV3_AUXPR) HSP 1 Score: 165 bits (417), Expect = 6.100e-44 Identity = 111/273 (40.66%), Postives = 148/273 (54.21%), Query Frame = 2 Query: 107 MSSTLLERTRAFHEDIEAYERAVIEELKSKPKSHKQRVLQQHRVAALLDEAAERSRGLHDLYKDEDGTLKEEIAAMRGRDALKSFGERTKETLNYHARHPNIQVQNGPD---LALDAEARVAFSGEELYGKFFDLHGLFARWINLPQCKDKKLDYLDFLAQLSGPFEALPEAEKARGGGGAGRGAYGRYVGDLGAYLEGFLRRTQPLVDVKDVRAEARCEFEAEWAAGKAPGWPPVAAAAAMGAAAAAGREPRP---LDLSKYRAAEELLPLG 907 M++TLLE TR HED+E ER ++++ +++ K++K ++LQ HRV LLD R+ L D+YKDED + K++IAA+RG D + +F +R KE YH R P+ + G L AE VAFSGEE G++ DLH L A N + LDY ++ L+ A +R AY Y+ L AYLE F RTQPL D+ A EFE WA G PGW A GAAAA GR P LDL + + +EL LG Sbjct: 1 MATTLLENTRQQHEDMERLERLIVKDFRTETKTYKDKLLQSHRVRGLLDALQSRAAALVDIYKDEDESRKQDIAALRGADPISTFYDRLKEVRAYHRRFPSEDITEGDGSEALLAAAEPAVAFSGEEALGRYLDLHELHAAHSN-GAFAGQPLDYHTYVLALADWSRVARPARTSR--------AYREYLERLAAYLESFHARTQPLADLDAQMRGAVAEFEEAWARGAVPGWEDRGAG---GAAAAGGRGEVPEGALDLDAFDSVDELELLG 261 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12071.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12071.1.1 >prot_P-wetherbeei_contig12071.1.1 ID=prot_P-wetherbeei_contig12071.1.1|Name=mRNA_P-wetherbeei_contig12071.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=276bp MSSTLLERTRAFHEDIEAYERAVIEELKSKPKSHKQRVLQQHRVAALLDEback to top mRNA from alignment at P-wetherbeei_contig12071:2..1586- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12071.1.1 ID=mRNA_P-wetherbeei_contig12071.1.1|Name=mRNA_P-wetherbeei_contig12071.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1585bp|location=Sequence derived from alignment at P-wetherbeei_contig12071:2..1586- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12071:2..1586- >mRNA_P-wetherbeei_contig12071.1.1 ID=mRNA_P-wetherbeei_contig12071.1.1|Name=mRNA_P-wetherbeei_contig12071.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig12071:2..1586- (Phaeothamnion wetherbeei SAG_119_79)back to top |