mRNA_P-wetherbeei_contig12.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12.4.1
Unique NamemRNA_P-wetherbeei_contig12.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A7S0DIN8_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DIN8_9EUKA)

HSP 1 Score: 143 bits (360), Expect = 3.030e-33
Identity = 114/366 (31.15%), Postives = 178/366 (48.63%), Query Frame = 1
Query:  244 VLGDALFDIEPGVTYN-------FGVLSRVKPADVASDVARTFAPTFSTYLNESLSDYGTSFTTT-GFNHLYGGFAALNISLYPGFPSPPDFWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKVSIVMLS-LGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDV---GADFPLNTSTALWSEWAVFAMPWVPTD--VKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNYY----PDGSNTC----NAYDFTALLANFQCPDGYARINFAYLATRCSDLGTP 1275
            VL + LF +  G  Y         G L+   P D  +     F+PTFSTYL E++   G  F     F  +   F++    +     +  DF   +P   +C +S + V  I + RN   G EL ++GG+ FT++DNDEI+ +ADL  K V  V +S LG+  +Q   ++ +G   + T   Q+ F  ++   V DVL N   D G V+T  +E   +KG +N S +K+    ++   G  FP  +ST L+ EW++  +P V  D  V + VA ALM  +++  H AA  G Y+ W PP SY  + +    +N+       G   C    N YD         CPDGY +++   ++++C+  G P
Sbjct:   18 VLYNILFGVSDGAPYTASKEVWKIGGLAIRGPTDFHA----RFSPTFSTYLTETV---GPQFNPPIRFESIALDFSSTFTQVEQ---ASVDFIYTNPSAFSCLESEFDVSAIVTLRNFRQGNELTRFGGIIFTRSDNDEINAIADLEGKIVEAVSISGLGAAQMQWKLLQDKG-YSLMTLPKQVRFAFNQKKIVLDVL-NGNADVGFVRTDMIEGMASKGEVNISSFKVIHQQNMTYEGRRFPFLSSTELYPEWSLGMLPHVGIDYMVSERVAFALM--DIHKDHWAAKNGTYSTWQPPLSYMRLNEMQEDLNWIIKNETTGKRMCIRSSNLYDAIV------CPDGYFKLSQDVVSSQCNSYGDP 363          
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: F2UPL3_SALR5 (Guanylate cyclase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UPL3_SALR5)

HSP 1 Score: 114 bits (286), Expect = 1.290e-23
Identity = 83/269 (30.86%), Postives = 130/269 (48.33%), Query Frame = 1
Query:  490 DFWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKVSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDV----GADFPLNTSTALWS-EWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNY-YPDGSNTCNAYDFTALLANFQCPDGYARINFAYLATRCSDLGTPC 1278
            DF  A+P   TC ++ +G+  + + R  V G +L ++G V FT+AD D+I+   D+  K V+ V      G         + G+    D  Q+ F  DE   +  VL  N +D G V +G LE  V    ++    K+    +V    G  +P  TS+++ S EW +  +P VP +V+ AV  AL+S  ++S+   AIAG YAAW PP SY+  +    S+   + D   +        L+    CP GY + +   +A+ CS  G  C
Sbjct:  108 DFTFANPALFTCGEAEFGLASLLTLRRKVLGEQLSQFGAVIFTRADRDDINSAPDIAGKTVAAVSFITFGGFQAQWGTLRDAGLDFLIDTQQIKFTNDEDEVIAQVLEGN-SDVGFVTSGVLEDHVENSGLDLKKIKVLHAENVITTEGDVYPFITSSSVLSPEWTLAVLPNVPWEVQSAVVNALLS--IDSASEYAIAGRYAAWQPPKSYTATRALQVSLGVMFADDLGSFRCVRTKNLIDAVVCPFGYNKQSPELVASGCSLAGLDC 373          
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: UPI001912E870 (PhnD/SsuA/transferrin family substrate-binding protein n=2 Tax=Chromatiaceae TaxID=1046 RepID=UPI001912E870)

HSP 1 Score: 108 bits (269), Expect = 1.490e-21
Identity = 72/219 (32.88%), Postives = 107/219 (48.86%), Query Frame = 1
Query:  493 FWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKVSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNYYP 1149
            F L +PG     +  Y +  IA+ RN        ++GGV FT+A+ D+I++L+DL  K++  V  +   G L    +  + G+     LA + F G     V  V  +   DAG V+T  LE    +G IN SD+++ A      DF L  ST L+ EW    +   P  + + VA ALM  ++    PAA+AGGYA W  P  Y  V   L+++   P
Sbjct:  139 FLLVNPGMYVDLEVRYRISRIATLRNGTGNQARNRFGGVIFTRAERDDITQLSDLRGKRLLAVDPNSFGGFLMQLDVLRQQGIAAPRALAALEFAGIHDAVVLGVR-DGQADAGMVRTDILERMATQGRINLSDFRVLAS-PAAPDFRLRLSTPLYPEWPFSTLQHTPNALAQQVAVALM--QMPQDDPAALAGGYAGWTVPLDYQPVHQLLQALGRPP 353          
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A1Z4RLS0_9CHRO (Putative methyl-accepting chemotaxis protein n=1 Tax=Chondrocystis sp. NIES-4102 TaxID=2005460 RepID=A0A1Z4RLS0_9CHRO)

HSP 1 Score: 105 bits (262), Expect = 1.120e-20
Identity = 68/221 (30.77%), Postives = 112/221 (50.68%), Query Frame = 1
Query:  490 DFWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKK-VSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNYYP 1149
            DF++ +PG    F++ YGV+ IA+ +NL  G    ++G V  TKAD  +I+EL DL +KK +++   + G   + +  +   G   I    +++ F G     ++ VL +   DAG V+T  +E    KG +   D+K+    +   +FP   ST L+ EWA  +   +P ++K+AVA AL+    NS+  AA A     W  P +Y  V +    +   P
Sbjct:  122 DFYITNPGMYIDFEANYGVNRIATFKNLRLGKAYTQFGAVIITKADRADINELEDLKQKKFMAVAPDAFGGWQMAEGVLFDAGFKKINKFFSELSFGGTHENVIKAVL-SGEVDAGTVRTDAIERLAQKGEVRIEDFKVINQQETTPEFPFVHSTPLYPEWAFASSKKMPLELKEAVAKALLDMPKNSA--AAKAAKSDGWTVPLNYQPVNELFIDLKLPP 339          
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A846HQP4_9GAMM (Histidine kinase n=1 Tax=Halochromatium sp. TaxID=2049430 RepID=A0A846HQP4_9GAMM)

HSP 1 Score: 102 bits (253), Expect = 1.580e-19
Identity = 72/220 (32.73%), Postives = 114/220 (51.82%), Query Frame = 1
Query:  493 FWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKVSIV-MLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNYYP 1149
            F L +PG     +  + +  IA+ RN   G    ++GG+ FT+AD D+I+ELADL  K++  V   SLG  ++Q + ++ +G + +   LA + F G     V  V  +   D G V+T  LE    +G I  SD+++ A   V  +FPL  ST L+ EW    +   P  + + VA AL+  ++ +   AA+AGGY  W  P  Y  V   L++++  P
Sbjct:  137 FLLVNPGMYVDLEVRHRISRIATIRNGSGGQARNRFGGLIFTRADRDDIAELADLRGKRLLAVDPHSLGGFLMQLDVLQRQG-IAVPRSLAALDFAGIHDAVVLAVR-DGLADVGLVRTDILERMAIQGIIEHSDFRVLAPRSV-PNFPLLLSTPLYPEWPFSTLQSTPNALAQQVAIALL--QMPTDAAAALAGGYTGWTVPLDYQPVHQLLQALHRPP 351          
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A7S0MM44_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MM44_9CRYP)

HSP 1 Score: 98.6 bits (244), Expect = 2.280e-19
Identity = 90/294 (30.61%), Postives = 129/294 (43.88%), Query Frame = 1
Query:  316 PADVASDVARTFAPTFSTYLNESLS---DYGTSFTTTGFNHLYGGFAALNISLYPGFPSPPDFWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKV---SIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGY--------------INASDYKIFAMMDVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSV 1137
            P   ++     F PTF  YLN  +    D   SFT   F      FA +  +         DF    P  ++CF S + +  I + RN   G+EL +YGGV F +ADN  +  + DL  + +   SI++      V  DN +      G    LAQ +   D    V DVL +   DAG V+T  LE                     ++A+D         G  FP  +STAL+ E+A+ A+P V   V +AV  AL    +N+S PAA AG Y+ + PP SY  ++    S+
Sbjct:   36 PVGTSASFFSGFRPTFEEYLNAEVGRQFDPPISFTLK-FADFVSVFAMIESA-------EADFVYVSPNLMSCFQSEFDIAPILTLRNFRQGIELNRYGGVIFARADNMNVKSVKDLKGRTILGTSILLAQFQWKVFADNGLSLMQDSGKVLFLAQGMSQND---VVFDVL-SGIADAGFVRTDLLEGXXXXXXXXXXXXXXXXXVANLSAAD---------GRPFPFESSTALYPEYALGALPRVDWAVVRAVQGALQ--RINASSPAARAGLYSTFQPPLSYFALRSLQESL 306          
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A1E2UP35_9GAMM (Histidine kinase n=5 Tax=Candidatus Thiodiazotropha endoloripes TaxID=1818881 RepID=A0A1E2UP35_9GAMM)

HSP 1 Score: 99.4 bits (246), Expect = 1.220e-18
Identity = 79/293 (26.96%), Postives = 124/293 (42.32%), Query Frame = 1
Query:  271 EPGVTYNFGVLSRVKPADVASDVARTFAPTFSTYLNESLSDYGTSFTTTGFNHLYGGFAALNISLYPGFPSPPDFWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKVSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNYYP 1149
            E G TY  GVL++   +      + T     + YL + ++D         F  +     +  I          DF LA+ G     +  +    IA+  N V G    ++GGV FT+ DN  I  L+DLN      V  +   G L   R      + +        FN   +  V D +IN   DAG V++ TLE   A G +   + K+  +      FP   S+ L+ EW + A+P  P  + + V+ AL++  +   HPAA++ G   W  P +Y  V +  +S+N  P
Sbjct:   20 EEGSTYAIGVLAKRGESITLQRWSET-----ADYLTQKITDARFRIVPLPFEEIEPAIQSKQI----------DFLLANSGIYIKAEHDFRAFRIATLINKVGGHAEERFGGVIFTRKDNQTIQALSDLNGITFGAVNPTSLGGFLMAKRELQRHNIDLDKQTTLHFFN--THDAVVDAVINGKVDAGTVRSDTLEKMSASGMVKLHEIKVLNLQ-TNQGFPYLLSSQLYPEWPIAALPHTPKTIGEKVSIALLN--MPKDHPAAVSSGTFGWTVPANYESVHELYKSLNIPP 292          
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A7D4NRP6_9GAMM (PhnD/SsuA/transferrin family substrate-binding protein n=2 Tax=Thiomicrorhabdus TaxID=2039723 RepID=A0A7D4NRP6_9GAMM)

HSP 1 Score: 97.1 bits (240), Expect = 7.540e-18
Identity = 71/221 (32.13%), Postives = 107/221 (48.42%), Query Frame = 1
Query:  490 DFWLADPGFLTCFDSIYGVDVIASRRNL-VDGVELRKYGGVWFTKADNDEISELADLNEKKVSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNYYP 1149
            DF +A+P F    +   G+  +A+ R   V G EL++YGGV FT+AD ++I  L DL  + ++ V  +   G     R      + I  DL ++ F G     V  V      D G V+TGTLE   A+G I+ +D+ + A     A FP   ST L+ EW +  +  V   +   VA ALM  +++S  P+  +   A W  P +Y  V D L+ +   P
Sbjct:   79 DFIIANPAFYVELEKNDGITPVATMRTKGVSGSELKRYGGVIFTRADREDIQTLRDLKGRTLAAVDSASFGGWQIGWRELKHHAIDIDRDLERVEFIGTHDAVVYAVA-EGAADVGIVRTGTLEKMAAEGGISLNDFVVLAPRHP-AGFPYMLSTDLYPEWPIAKVSGVSEALAIKVAVALM--QISSQDPSFQSSNLAGWTLPLNYQSVHDALKELEVGP 295          
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A370B3U4_9SPIO (Diguanylate cyclase n=1 Tax=Oceanispirochaeta sp. M1 TaxID=2283433 RepID=A0A370B3U4_9SPIO)

HSP 1 Score: 95.1 bits (235), Expect = 1.800e-17
Identity = 68/220 (30.91%), Postives = 106/220 (48.18%), Query Frame = 1
Query:  490 DFWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKVSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNYYP 1149
            DF L +      F+  YG++ +A+ +NL    +L ++GGV FT++D  +++   DLN + ++ V  S   G     R   +       DL  + F GD ++ VE V  N   DAG V+T TLE    +G IN  D+ +         F L  ST L+ EW   +MP +   + + VA AL+S + +S    A     A W  P +Y  V D +R ++  P
Sbjct:   78 DFVLTNSLLYISFEINYGINRLATLKNLRGEQDLTEFGGVLFTRSDRIDLNFSRDLNGRTLAAVDPSSIGGWYSVAREMKQENFDPYRDLKSLEFLGDHFSVVEAVK-NRKVDAGIVRTDTLEYMADQGLINLKDFSVINPYPRTMKFNLRRSTELYPEWPFASMPHISQRLSEQVAIALISMDADSE--TARRTMSAGWTIPLNYKAVHDCMRELHIPP 294          
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A5C0DR01_9CYAN (Tetrathionate sensor histidine kinase TtrS n=3 Tax=Nostocales TaxID=1161 RepID=A0A5C0DR01_9CYAN)

HSP 1 Score: 94.7 bits (234), Expect = 3.740e-17
Identity = 81/302 (26.82%), Postives = 125/302 (41.39%), Query Frame = 1
Query:  370 YLNESLSDYGTSFTTTGFNHLYGGFAALNISLYPGFPSPPDFWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKVSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMM-DVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQD--QLRSVNYYPDGSNTCNAYDFTALLANFQCPDGYARINFAYLATRCSDL 1266
            YL   LS+Y   FT    N    G A    ++        +F +A PG    F+++YGV+ +A+ + L  G     +GGV F  A  D I  L DL  K    V  +   G     R   E G+    D   + F  + +  V   +     DAG + T  LE    +G ++  ++KI       G  FP   ST L+ EW        P+ + + VA AL+  +L   HPAA A     W  P +Y  V +  Q+  V+ Y D   T ++++     +N    D     N  + + R  ++
Sbjct:   24 YLTTELSEY--DFTIVPLNFTQIGAAIEQNAV--------EFVIASPGIYVEFEALYGVNRLATLKQLRMGRAYTMFGGVIFCNAHCDNIQSLTDLRGKNFVAVAENSFGGWRSAWREIVEAGINPYRDFQSLQFT-NSHDAVIYAIGEGKADAGTISTNVLEQMALEGKVDLKNFKIINQQTQYGEKFPFALSTQLYPEWPFAVTQETPSQLAEQVAIALL--KLPKDHPAAKAAKSEGWTIPLNYQSVHECFQVLQVHPYKDFGKTTSSFELAVKGSNDGLWDWNLETNEVFFSNRWKEM 312          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0DIN8_9EUKA3.030e-3331.15Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
F2UPL3_SALR51.290e-2330.86Guanylate cyclase n=1 Tax=Salpingoeca rosetta (str... [more]
UPI001912E8701.490e-2132.88PhnD/SsuA/transferrin family substrate-binding pro... [more]
A0A1Z4RLS0_9CHRO1.120e-2030.77Putative methyl-accepting chemotaxis protein n=1 T... [more]
A0A846HQP4_9GAMM1.580e-1932.73Histidine kinase n=1 Tax=Halochromatium sp. TaxID=... [more]
A0A7S0MM44_9CRYP2.280e-1930.61Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A1E2UP35_9GAMM1.220e-1826.96Histidine kinase n=5 Tax=Candidatus Thiodiazotroph... [more]
A0A7D4NRP6_9GAMM7.540e-1832.13PhnD/SsuA/transferrin family substrate-binding pro... [more]
A0A370B3U4_9SPIO1.800e-1730.91Diguanylate cyclase n=1 Tax=Oceanispirochaeta sp. ... [more]
A0A5C0DR01_9CYAN3.740e-1726.82Tetrathionate sensor histidine kinase TtrS n=3 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12contigP-wetherbeei_contig12:13650..16803 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog946362.XP_004993001.1
PFAMsGuanylate_cyc,Phosphonate-bd,Pkinase_Tyr
Model size1279
Max annot lvl33154|Opisthokonta
KEGG rclassRC00295
KEGG koko:K12322
KEGG ReactionR00434
KEGG Pathwayko00230,ko04744,map00230,map04744
Hectar predicted targeting categorysignal peptide
Exons7
Evalue2.62e-28
EggNOG OGsCOG2114@1|root,KOG1023@2759|Eukaryota,39QBI@33154|Opisthokonta
EC4.6.1.2
DescriptionTKL DICTY4 protein kinase
Cds size1086
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12.4.1prot_P-wetherbeei_contig12.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12 13842..16803 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185934.4111695-UTR-P-wetherbeei_contig12:13649..138411683185934.4111695-UTR-P-wetherbeei_contig12:13649..13841Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12 13650..13841 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185934.421439-CDS-P-wetherbeei_contig12:13841..141101683185934.421439-CDS-P-wetherbeei_contig12:13841..14110Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12 13842..14110 +
1683185934.4283154-CDS-P-wetherbeei_contig12:14438..147421683185934.4283154-CDS-P-wetherbeei_contig12:14438..14742Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12 14439..14742 +
1683185934.4352443-CDS-P-wetherbeei_contig12:15243..153511683185934.4352443-CDS-P-wetherbeei_contig12:15243..15351Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12 15244..15351 +
1683185934.4426827-CDS-P-wetherbeei_contig12:15472..155961683185934.4426827-CDS-P-wetherbeei_contig12:15472..15596Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12 15473..15596 +
1683185934.4504821-CDS-P-wetherbeei_contig12:16191..163031683185934.4504821-CDS-P-wetherbeei_contig12:16191..16303Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12 16192..16303 +
1683185934.4586582-CDS-P-wetherbeei_contig12:16500..166441683185934.4586582-CDS-P-wetherbeei_contig12:16500..16644Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12 16501..16644 +
1683185934.4672441-CDS-P-wetherbeei_contig12:16778..168031683185934.4672441-CDS-P-wetherbeei_contig12:16778..16803Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12 16779..16803 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12.4.1

>prot_P-wetherbeei_contig12.4.1 ID=prot_P-wetherbeei_contig12.4.1|Name=mRNA_P-wetherbeei_contig12.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=362bp
MTRMRLPIAQFFALVRAVLGDALFDIEPGVTYNFGVLSRVKPADVASDVA
RTFAPTFSTYLNESLSDYGTSFTTTGFNHLYGGFAALNISLYPGFPSPPD
FWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEIS
ELADLNEKKVSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYT
TVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDVGADFPLN
TSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWD
PPYSYSGVQDQLRSVNYYPDGSNTCNAYDFTALLANFQCPDGYARINFAY
LATRCSDLGTPC
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mRNA from alignment at P-wetherbeei_contig12:13650..16803+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12.4.1 ID=mRNA_P-wetherbeei_contig12.4.1|Name=mRNA_P-wetherbeei_contig12.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3154bp|location=Sequence derived from alignment at P-wetherbeei_contig12:13650..16803+ (Phaeothamnion wetherbeei SAG_119_79)
CCTGAAACGCGTAAACAGGCTTGCGTCCCGCGTCCAGTCGGCGCAGGGTT TCATATTTCCGATTACGTCACACGCGAAACAAAAGACGCCGTTGTCGAGC CCGCTTTCGTCGCCCTTGGAAAGCGTCCATTGCAGGGGTGAATTTCGCCC CCAACGAGCTCTCGTCGGCAAATCAATAGCCGAATAGAGCGAATGACGCG AATGAGACTTCCGATTGCCCAGTTCTTCGCCCTCGTGCGGGCGGTGCTCG GCGACGCTCTTTTTGACATTGAACCCGGGGTGACTTACAACTTCGGTGTT TTGTCGCGGGTGAAGCCAGCCGACGTCGCCTCTGACGTCGCCAGGACATT TGCTCCGACATTTTCAACCTACCTGAACGAGTCATTATCCGACTATGGCA CCTCCTTCACCACGACCGGGTTCAACCATCTCTATGGCGGCTTTGCAGCG CTGAACATAAGGTGGGTGGGGCTTTTGAGGGTAGAAAATACCTTACCGAT CAAGGCTTGGGTGGCTACAAACTTTCCCTTGCATGCCGAATGTTTTAGCG GGTAAAATGCCTGGAGGACTCGCGGCATGGCACTCCTCCGGCGAGGCGCT CGCATCAACGCAGGAAGGTGGGGGATAACAGCAATCTACCAACCCCTCTC ATCCTTCCGCACTGATGTTACCTCACTCGCCCAAGGGCTTTCACGTCTGA CCTTCCGACCGCGTCCTCGTCTGGCTGGCTCTGCTGCGCCCTCACCGTGC CGTGCCGCCTCGTCGCTTGCTGCTCTTTCCCACAAACAGCTTGTACCCTG GTTTTCCGTCGCCGCCAGACTTCTGGTTAGCCGACCCCGGATTCCTGACA TGCTTCGACTCCATCTATGGCGTCGATGTCATTGCGTCACGGCGGAACCT CGTGGACGGGGTGGAGCTACGAAAGTACGGCGGCGTCTGGTTCACGAAGG CCGACAACGACGAAATTAGCGAGCTTGCTGACTTGAATGAGAAGAAAGTA TCGATCGTTATGCTCTCGCTCGGCTCAGGAGTGCTACAGGACAACCGCAT GGAGTCGGAGGGGGGGGTCGGCATCGCGACCGACCTCGCACAGGTGAATC CGCTGATTGGTTTCGATTGCGCATCCTCTTGGGGTTAGGGGTTTAGCATT GGAGGCTTTCAAGTGCCTCCGTCTTGGTGTGTGCGACGAAGAGGTGGAGA GACTCGGTATTTCCTTGCAAAGATAGCGCCTCCCGGCTCCTGATCATTTA CTGGCGGCCGCAATGGAACACAATCAGATTTCCTGTTCCTTTGGGCCGGC TCCTCTGTTTTGGGGAGCACGTTCAGGTTTTTCTTTGGTTTGTCGGACCT TGTAGTCGTCGTCCACGGTTGCTGTCCGTCTCCGATTGTCTAATGGGCGT GCTCCCTGCTGAAGCTACCGCCGCCACCGTCGCTGCTGTTGCCACCGCCG CCTGACTACCGCCGCTGCGGCCGCTCCCGTCGCCGCCGTCGCCGCCGCCG CCGCGTCATTGCCGCCGCCGCCGCGCCCTTGCCACCACGGCGGTGCCTAC CACCACAATCGCCGCCGCCGCAATCATCGCCATTGTGAATGAAGATGCTC TTCAACGGGGATGAGTACACGACCGTCGAAGACGTTCTCATCAACAACTA CACCGATGCCGGGGCTGTCCAAACCGGCACTCTGGAATCCTTTGTCGCCA AGGTAAATAGTGGCGTCTCATCCGGCTCGCCTTTTCTGGTCTCCTGTGTC CTAAAGAGTAGCGTCAATGCGATCGAGCGCCGTCATTGCGTCTGATGTGA TTTTCCGTCGCTGCTGAAATCAGGGCTACATCAACGCGTCCGACTACAAG ATCTTTGCCATGATGGACGTCGGAGCCGACTTCCCGCTTAACACATCAAC AGCACTGTGGTCAGAGTGGGCTGTGTTCGCTATGCCCTGGGTTCCCAGTG AGTGACTACTTCGTCTTTCTTTTCTTACTTTGTCTGCGCTAGTTGTGGGA AGACGGCTGGACGAACTTTCTTCGAGGTTATAAGGCGGTGGCGGTGCGTG TCGGCGGTGGCGGCGGTGACGGCGATGGCGGTGGCGACGTTGGCAGCGGC GGGGACGGTAACGGTAGCTGAAGGTGCGTCGTGAAGCAGCGACGACAGCG GTTGCGTCAGCAGCGACGATGGCGGCTGGGGCTGATGGTGGCTTATTCAG TGGGAAGGGGCCCTGATCTTCCTTCTAGCCATACCTATTCTGCCATATCA ATCTTTTGCCGCCGCTCTGCTTCGCCGCCGCCGCCACGACCGTTGCCGCA CCCATTGCCGACATTCGGCACTGCTGCCGCTTCGCGCCACCACCCTCACC GTCGGCCTCGCCTCTACCGCCATCATTGCTGCGGTCGCAACCACTGTCGT TCATTGCTGGTGCTACGCGCTGCCACCGCTGCTGCTCGTCGCCGCCTCCA CTGCCGCCGTCGCAACAACTGCTGCTCCCATTACCCCCTTGTACACGCTC CGGTGTTCGACTTGCCTTTGGGGTTTATCGTGGCGCGAGCAGCGGACGTG AAGAAGGCTGTAGCGGCGGCACTCATGTCGCCGGAGCTCAATAGCTCTCA CCCGGCAGCAATTGCTGGGGGCTACGCAGCCTGGGACCCACCGTATTCCT ACAGGCAAGATAGTTGTCTCACCATCCGGCTTTCCGGCTGTGGCTATCTT TAAACGGGAATCCAACAATTTAGTTAGATTAAACCCATGTTACTGGTGCT ACTGACATAGAAATTTGCATTGATAAAGGGCAATAATCCTTTTCATTTGT GAAAAGACGTACAACCTGGGATGTCCCCACCGCCTTCCCCCATGTGTACA GCGGCGTGCAAGACCAGCTGCGGAGCGTTAACTACTACCCCGACGGCAGC AACACGTGCAATGCCTACGATTTTACGGCCCTCCTCGCTAACTTTCAGTG CCCCGATGGTTATGCACGCATCAACTTTGCGTACCTGGCAACCAGGCTAG TCAGCGTTGTTTTGCGGTCTACATCCAGCAAGCCTCTTTCCGCCTCTTTT TGGTACGCGGGACCCTTCTCCGGGCGAGCCCTTTTCAGCAATTCATTTAT CGCACCCGATGTCCCGCCTGCCGGTCCAGGTGCTCCGATCTTGGCACACC CTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12:13650..16803+

>mRNA_P-wetherbeei_contig12.4.1 ID=mRNA_P-wetherbeei_contig12.4.1|Name=mRNA_P-wetherbeei_contig12.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1086bp|location=Sequence derived from alignment at P-wetherbeei_contig12:13650..16803+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGCGAATGAGACTTCCGATTGCCCAGTTCTTCGCCCTCGTGCGGGC
GGTGCTCGGCGACGCTCTTTTTGACATTGAACCCGGGGTGACTTACAACT
TCGGTGTTTTGTCGCGGGTGAAGCCAGCCGACGTCGCCTCTGACGTCGCC
AGGACATTTGCTCCGACATTTTCAACCTACCTGAACGAGTCATTATCCGA
CTATGGCACCTCCTTCACCACGACCGGGTTCAACCATCTCTATGGCGGCT
TTGCAGCGCTGAACATAAGCTTGTACCCTGGTTTTCCGTCGCCGCCAGAC
TTCTGGTTAGCCGACCCCGGATTCCTGACATGCTTCGACTCCATCTATGG
CGTCGATGTCATTGCGTCACGGCGGAACCTCGTGGACGGGGTGGAGCTAC
GAAAGTACGGCGGCGTCTGGTTCACGAAGGCCGACAACGACGAAATTAGC
GAGCTTGCTGACTTGAATGAGAAGAAAGTATCGATCGTTATGCTCTCGCT
CGGCTCAGGAGTGCTACAGGACAACCGCATGGAGTCGGAGGGGGGGGTCG
GCATCGCGACCGACCTCGCACAGATGCTCTTCAACGGGGATGAGTACACG
ACCGTCGAAGACGTTCTCATCAACAACTACACCGATGCCGGGGCTGTCCA
AACCGGCACTCTGGAATCCTTTGTCGCCAAGGGCTACATCAACGCGTCCG
ACTACAAGATCTTTGCCATGATGGACGTCGGAGCCGACTTCCCGCTTAAC
ACATCAACAGCACTGTGGTCAGAGTGGGCTGTGTTCGCTATGCCCTGGGT
TCCCACGGACGTGAAGAAGGCTGTAGCGGCGGCACTCATGTCGCCGGAGC
TCAATAGCTCTCACCCGGCAGCAATTGCTGGGGGCTACGCAGCCTGGGAC
CCACCGTATTCCTACAGCGGCGTGCAAGACCAGCTGCGGAGCGTTAACTA
CTACCCCGACGGCAGCAACACGTGCAATGCCTACGATTTTACGGCCCTCC
TCGCTAACTTTCAGTGCCCCGATGGTTATGCACGCATCAACTTTGCGTAC
CTGGCAACCAGGTGCTCCGATCTTGGCACACCCTGC
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