mRNA_P-wetherbeei_contig1198.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1198.4.1
Unique NamemRNA_P-wetherbeei_contig1198.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: D7FJ10_ECTSI (VPS37 C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ10_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 5.200e-55
Identity = 131/340 (38.53%), Postives = 182/340 (53.53%), Query Frame = 1
Query:    1 MSWLFGKKGGGGTGVHRDLADCRDRQIANMQQMVHGLECKQADKALFEVQLHVPPDARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPEYLVGNIIAEIAQEF-RSKSGANAAATNGASATGGPSLAASTQQQQSQYGQPTVAQPTYGHYPQLSGSGGASGVGGXXXXXXXXXXXXXXXRSGKLDESEHHVPLPPVPARFNELENMTLPQLRRLLEDDVARRALLEGMPSVAGMREVRADMRRGNAQVAEATLAKAGQLAAQRAEAAQLQAQLRELCDEHAGTAQAHARLTGGGDDGEILRKLKAAAKEAERASQ 1017
            MSWLFG           D+   RDRQI+N+++ V GL  K  D +L EVQ+  P D   V LR+FLPT FP DRPVLQLLS V HPWVN YMQVVGHP    WDG    T  P  L+G+I+A + QEF RS  G   +    AS   G  +A          G   +  P    YP    +GGA+   G               ++ ++    HH P+P +P  F EL+ ++  +L RLL D+ AR+ALL GM +V  M+++R D+R+GN + A  TLAK    +  R E  +++A+L+ L   +   A    +  GG  D  IL+++K A+K A+ +S+
Sbjct:    1 MSWLFGSGNRKTPTGQSDIRAARDRQISNLKERVPGLLLKSTDNSLNEVQITAP-DGAKVVLRVFLPTKFPSDRPVLQLLSPVTHPWVNTYMQVVGHPDLHGWDG----TNPP--LIGDIVAAVIQEFGRSNGGVTTSGRVQASTVWGGPIAQEPSGTPPAVGAFGLGNPPVS-YPAGRATGGAASAKGKAHMTSTDPRTGGEVQTRRMRPPVHHTPIPDIPDTFGELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKALQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSE 332          
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: A0A835YJX2_9STRA (VPS37 C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJX2_9STRA)

HSP 1 Score: 159 bits (403), Expect = 8.030e-42
Identity = 132/381 (34.65%), Postives = 184/381 (48.29%), Query Frame = 1
Query:    1 MSWLFG------------KKGGGGTGVHRDLADCRDRQIANMQQMVHGLECKQADKALFEVQLHVPPDARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSP-EYLVGNIIAEIAQEFRSKSG-------ANAAATNGASATGGPSLAASTQQQQSQYGQPTVAQPTY---------------GHYPQLSGSGGASGVGGXXXXXXXXXXXXXXXRSG-------KLDESEHHVPLPPVPARFNELENMTLPQLRRLLEDDVARRALLEGMPSVAGMREVRADMRRGNAQVAEATLAKAGQLAAQRAEAAQLQAQLRELCDEHAGTAQAHARLTGGGDDGEILRKLKAAAKEAERASQ 1017
            MSWLFG            ++GGG T    D+   R  Q+A +++ + G+  + AD AL+EV + V PD   V +RIF P  FP +RPVLQLLS V HPWVN+YMQVVGHP  A W GNA   G P   +V  I+ E++    S +G       +    TN AS    PS      QQQ    +P   +P +               G + +   S G+   GG                 G       K  E +H  P+P +P+RF EL+ +T  QLRRL  D VA   +++GM S  GMRE+  D+ +GNA+VA+A +  + +L   R E   L+ +L E     A          G   D   L+ +K AAK+A+++SQ
Sbjct:    1 MSWLFGTGGKTKSPRHGQQQGGGSTSDDADMKHHRLTQLAGLERDIPGIVKRAADGALYEVPVPVGPDGHPVNMRIFFPVKFPVERPVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNA---GKPISVIVKEIMIELSGGTASTAGQALPQQPSQRMPTNAASFAH-PSTGPQQWQQQQPSWRPDERKPNWTPPEGPIGAANGNSGGQFWRPQPSDGSQSGGGRVGGGAAQWSPSQVGAGGGGSSTDAKRVEEKHRTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMELHE-----AAALNPVGVGAGASADHVTLKAVKEAAKDADQSSQ 372          
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: A0A7S2HP11_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HP11_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.610e-26
Identity = 98/299 (32.78%), Postives = 146/299 (48.83%), Query Frame = 1
Query:   10 LFGKKGGGGTGVHRDLADCRDRQIANMQQMVHGLECKQADKALFEVQLHVPPDARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPEYLVGNIIAEIAQEFRSKSGA--NAAATNGASATGGPSLAASTQQQQSQYGQPTVAQPTYGHYPQLSGSGGASGVGGXXXXXXXXXXXXXXXRSGKLDESEHHVPLPPVPARFNELENMTLPQLRRLLEDDVARRALLEGMPSVAGMREVRADMRRGNAQVAEATLAKAGQLAAQRAEAAQLQAQLREL 900
            +FG   GG T         RD QI   Q        KQADK+LF++   +  + RS  LRIFLP  FPE++PVLQLL+ ++H W+NQY Q+VGHP  +NWD     T         +I E+++E +S S    + ++TN AS    PS  A+    +      T+ QP+                                 R+ + +  +   PLPP+PA F +L+ M++ +L  L  DDVA +A L G  SV  M ++R  +   NA++A++ L +  +L   R EA  LQ  L+E+
Sbjct:    2 MFGFLAGGQT--------VRDTQIEKFQAGFPNAIQKQADKSLFDLPFQI--ERRSYTLRIFLPPKFPEEKPVLQLLTPLKHHWINQYNQIVGHPYLSNWDSKFELT--------TLIKEVSEELKSLSRQQPDVSSTNPASRHAPPSYRAAAMLDEPST---TMRQPS-----------------------------PSPKRNDEPEPFK--TPLPPIPAHFEDLDLMSVRELETLDRDDVAFQAHLFGFESVRTMCDMREQVIEENAKIAQSNLQRKDELELLRTEALTLQTTLQEI 248          
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: A0A7S4DDS2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDS2_HETAK)

HSP 1 Score: 87.8 bits (216), Expect = 1.430e-17
Identity = 39/110 (35.45%), Postives = 68/110 (61.82%), Query Frame = 1
Query:   55 LADCRDRQIANMQQMVHGLECKQADKALFEVQLHVPPDARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPEYLVGNIIAEIAQEF 384
            L + R +QI +++ +V GL+    D++ FEV +  P  +R+V +RI+LP NFP ++PVLQ+L+Q++HPW+N + QV GHP   +W         P   +  ++ ++  +F
Sbjct:   12 LQEQRSQQIESLKTIVPGLKETSTDQSQFEVPVSTP--SRTVMMRIYLPANFPNEKPVLQMLAQIRHPWLNTFFQVTGHPMLLSW--------GPHCNISTVVLDVMSQF 111          
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: A0A7S2RS55_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RS55_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.250e-12
Identity = 87/302 (28.81%), Postives = 129/302 (42.72%), Query Frame = 1
Query:    1 MSWLFGKKGGGGTGVHRDLADCRDRQIANMQ-QMVHGLECKQADKALFEVQLHVPPDARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPEYLVGNIIAEIAQEFRSKSGANAAATNGASATGGPSLAASTQQQQSQYGQPTVAQPTYGHYPQLSGSGGASGVGGXXXXXXXXXXXXXXXR-SGKLDESEHHVPLPPVPARFNELENMTLPQLRRLLEDDVARRALLEGMPSVAGMREVRADMRRGNAQVAEATLAKAGQLAAQRAEAAQLQAQLREL 900
            MSW+FG             A  RD QI+  + +    +  +Q     F++++          LRIFLP  FPE+ P+LQLLS  +HPWVN Y QV GH   + W+     T     LV   +AE+++   +   A                 A    Q           P Y H  Q+           XXX            R S      E   PLP VP+ F +L+ +   +L++L +D VA  ALL  + SV  +R +R +  + NA++A  TL K  +L A ++E    + +L+EL
Sbjct:   13 MSWIFGS------------ASARDTQISRFEREFPQAVRTQQQHSCHFDIEILTRHGNNR--LRIFLPAKFPEEAPILQLLSPFRHPWVNAYHQVTGHAYLSRWNEQYDLTT----LVKETLAELSRGTPAPQPAIXXXXXXXXXXXXXXXXAVRAPQP----------PPYEH--QVXXXXXXXXXXXXXXAAERRLSTPEQRRPSASPPRQEVSFPLPEVPSSFAQLQGLDRERLQKLDQDVVAFSALLHDLDSVKTLRSMREETIQENARIARETLDKREELEALQSEVLVSRLELQEL 284          
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: A0A0G4FKW6_VITBC (VPS37 C-terminal domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FKW6_VITBC)

HSP 1 Score: 76.6 bits (187), Expect = 4.560e-12
Identity = 72/263 (27.38%), Postives = 116/263 (44.11%), Query Frame = 1
Query:   67 RDRQIANMQQMVHGLECKQADKALFEVQLHVPPDARSVC-LRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPEYLVGNIIAEIAQEF-----RSKSGANAAATNGASATGGPSLAASTQQQQSQYGQPTVAQPTYGHYPQLSGSGGASGVGGXXXXXXXXXXXXXXXRSGKLDESEHHVPLPPVPARFNELENMTLPQLRRLLEDDVARRALLEGMPSVAGMREVRADMRRGNAQVAEATLAK 837
            + RQIA+++QMV    C Q D++ ++VQL V     ++C L++ LP  FP   P + +  +++HPW+N    V GHP   +W+        P   +G +++EI +EF     R  +G   AA    S T  P  AAS+ +      QP    P YG      G+ G S                          +    PLPP PA F  ++ M+L +L    ++      L+     +     + +D+ + NA+V E  LA+
Sbjct:    5 KSRQIASLRQMVPSAVCLQPDESRWQVQL-VNQQFHTICTLQVLLPDQFPSVAPRISVTERLEHPWLNAD-HVTGHPALRSWN--------PHCHLGTVVSEIVKEFTRNPPRHTAGPATAAAAIPSRTTQPVGAASSDRSVGGVQQPPP--PLYGQSVSPPGTSGPS-----------------------TPSNRPRTPLPPCPAEFERVKQMSLAELEFYKDNPNCLDDLITESEQLQQYAAMTSDLIKANAEVLEKNLAR 232          
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: A0A7S3HG72_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HG72_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.050e-7
Identity = 70/269 (26.02%), Postives = 114/269 (42.38%), Query Frame = 1
Query:   67 RDRQIANMQQMVHGLECKQADKALFEVQLHVPPDARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPE-----YLVGNIIAEIAQEFRSKSGANAAATNGASATGGPSLAASTQQQQSQYGQPTVAQPTY------GHYPQLSGSGGASGVGGXXXXXXXXXXXXXXXRSG-KLDESEHHVP--LPPVPARFNELENMTLPQLRRLLEDDVARRALLEG--------MPSVAGMREVRADMRRGN 807
            ++RQI  ++ +   +     D  LFE++  V     S  LR+F+P +FP  RPVLQ    + HPW++Q+ QV G  +   W  +++     E      L G    E  +  R+ S A    T   + +    L  +T   Q    QPT    T         + Q + S   S    XX              +G  + E+        P +P+ F ELE M++ QL+RLL D+V+ +A ++         +P +A +R+   +  R N
Sbjct:   14 KERQIRELKAVFPSIRRPNNDDNLFEIKFVVNTQYSS--LRVFIPADFPNTRPVLQAAGPIVHPWLDQFKQVNGSEKLMTWTRHSSLVEVVEESLSALLTGTNSTEPPEAHRAVSPATTDLTAYPATSSTAQLRTATATYQPY--QPTPMAATVVPVXXXXSFAQATSSYAVSNTNXXXNRQTPVSQPIAAPAAGISMVEATRTTSGFFPALPSSFPELEKMSVLQLQRLLNDEVSLQAQVDSSGEYSQQVLPVIAQIRQTNEENARKN 278          
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: F4NT08_BATDJ (VPS37 C-terminal domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4NT08_BATDJ)

HSP 1 Score: 60.1 bits (144), Expect = 1.720e-6
Identity = 69/270 (25.56%), Postives = 109/270 (40.37%), Query Frame = 1
Query:   55 LADCRDRQIANMQQMVHGLECKQ-ADKALFEVQLHVPPDAR--SVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPEYLVGNIIAEIAQEFRSKSGANAAATNGASATGGPSLAASTQQQQSQYGQPTVAQPTYGHYPQLSGSGGASGVGGXXXXXXXXXXXXXXXRSGKLDESEHHVPLPPVPAR--------FNELENMTLPQLRRLLEDDVARRALLEGMPSVAGMREVRADMRRGNAQVAEATL 831
            L++ R RQ+A++    H L+ +Q    + FE+ L +    +     L + L   FP+  P++ L     HPW+N   Q+VGH + ANW        S    +G I+ EI  EF              S++ GP+              P     T    P  +GS  +   G                 S      E+++P    PA         F  L+  +L ++ RLLEDD +       +  V  M+ V+ D+ +GNA++AE TL
Sbjct:   14 LSELRRRQVASLSG--HNLQYRQIVPDSQFEITLGLGSAGQLPPFVLTLLLMPAFPDIAPIMYLRPSCTHPWINSQGQIVGHDKLANW--------SQHVSLGRIVKEIETEFTVH-------PPQPSSSSGPTHP------------PXXIPSTSTQSPAYTGSASSMPYG--------------TANSIMAQRLEYNLP----PANTISYSENIFPSLDAKSLEEINRLLEDDSSLEDFFLTISHVRDMKNVKHDLVKGNAEIAERTL 236          
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: UPI001403401F (vacuolar protein sorting-associated protein 37A n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001403401F)

HSP 1 Score: 57.4 bits (137), Expect = 1.200e-5
Identity = 35/113 (30.97%), Postives = 57/113 (50.44%), Query Frame = 1
Query:   55 LADCRDRQIANMQQMVHGLECKQADKALFEVQLHVPP--DARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPEYLVGNIIAEIAQEFR 387
            L   R  QI ++Q  + G    Q D     +  +VP   D +++ + +FLP  FP+DRPV+ ++  V+HPW+N+  QV+G P       N     S    +G  +  + +EFR
Sbjct:   18 LQSHRQLQIQSLQAAIPGTVEMQKD-----IVYNVPAVIDNQTLTINVFLPPQFPQDRPVVHVMPYVRHPWLNEKCQVIGSPAI-----NGFVIQSD---LGKAVVSVVEEFR 117          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FJ10_ECTSI5.200e-5538.53VPS37 C-terminal domain-containing protein n=2 Tax... [more]
A0A835YJX2_9STRA8.030e-4234.65VPS37 C-terminal domain-containing protein n=1 Tax... [more]
A0A7S2HP11_9STRA1.610e-2632.78Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4DDS2_HETAK1.430e-1735.45Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2RS55_9STRA4.250e-1228.81Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A0G4FKW6_VITBC4.560e-1227.38VPS37 C-terminal domain-containing protein n=2 Tax... [more]
A0A7S3HG72_9STRA6.050e-726.02Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
F4NT08_BATDJ1.720e-625.56VPS37 C-terminal domain-containing protein n=2 Tax... [more]
UPI001403401F1.200e-530.97vacuolar protein sorting-associated protein 37A n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1198contigP-wetherbeei_contig1198:4476..5953 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FJ10
Preferred nameVPS37C
PFAMsMod_r
Model size1017
Max annot lvl2759|Eukaryota
KEGG koko:K09579,ko:K12185
KEGG Pathwayko04144,map04144
KEGG ModuleM00409
Hectar predicted targeting categoryother localisation
GOsGO:0000813,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005770,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006914,GO:0006996,GO:0007032,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010008,GO:0010256,GO:0012505,GO:0015630,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0019058,GO:0019068,GO:0019538,GO:0019941,GO:0022607,GO:0030163,GO:0030496,GO:0031090,GO:0031410,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0032801,GO:0032991,GO:0036257,GO:0036258,GO:0036452,GO:0039702,GO:0040012,GO:0040017,GO:0043112,GO:0043162,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0043900,GO:0043902,GO:0043903,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0046755,GO:0046907,GO:0048306,GO:0048518,GO:0048524,GO:0050789,GO:0050792,GO:0051179,GO:0051234,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0061919,GO:0065007,GO:0070013,GO:0070925,GO:0071704,GO:0071840,GO:0071944,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:1901564,GO:1901565,GO:1901575,GO:1902186,GO:1902188,GO:1903772,GO:1903774,GO:1903900,GO:1903902
Exons3
Evalue8.52e-56
EggNOG OGsKOG3270@1|root,KOG3270@2759|Eukaryota
Ec32 ortholog descriptionModifier of rudimentary, Modr
Ec32 orthologEc-07_004850.1
EC5.2.1.8
Descriptionendosome transport via multivesicular body sorting pathway
Cds size1017
COG categoryU
BRITEko00000,ko00001,ko00002,ko01000,ko03110,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185933.6679816-CDS-P-wetherbeei_contig1198:4475..47011683185933.6679816-CDS-P-wetherbeei_contig1198:4475..4701Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1198 4476..4701 +
1683185933.6772208-CDS-P-wetherbeei_contig1198:4865..51691683185933.6772208-CDS-P-wetherbeei_contig1198:4865..5169Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1198 4866..5169 +
1683185933.684693-CDS-P-wetherbeei_contig1198:5466..59531683185933.684693-CDS-P-wetherbeei_contig1198:5466..5953Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1198 5467..5953 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1198.4.1prot_P-wetherbeei_contig1198.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1198 4476..5953 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1198.4.1

>prot_P-wetherbeei_contig1198.4.1 ID=prot_P-wetherbeei_contig1198.4.1|Name=mRNA_P-wetherbeei_contig1198.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=339bp
MSWLFGKKGGGGTGVHRDLADCRDRQIANMQQMVHGLECKQADKALFEVQ
LHVPPDARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRY
ANWDGNAACTGSPEYLVGNIIAEIAQEFRSKSGANAAATNGASATGGPSL
AASTQQQQSQYGQPTVAQPTYGHYPQLSGSGGASGVGGGTSGASGGGNST
AGGRSGKLDESEHHVPLPPVPARFNELENMTLPQLRRLLEDDVARRALLE
GMPSVAGMREVRADMRRGNAQVAEATLAKAGQLAAQRAEAAQLQAQLREL
CDEHAGTAQAHARLTGGGDDGEILRKLKAAAKEAERASQ
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mRNA from alignment at P-wetherbeei_contig1198:4476..5953+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1198.4.1 ID=mRNA_P-wetherbeei_contig1198.4.1|Name=mRNA_P-wetherbeei_contig1198.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1478bp|location=Sequence derived from alignment at P-wetherbeei_contig1198:4476..5953+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCTTGGCTCTTCGGTAAGAAGGGCGGCGGCGGCACGGGCGTTCATAG AGACCTGGCAGACTGCCGAGATCGGCAGATCGCAAATATGCAGCAAATGG TCCATGGGCTCGAATGTAAGCAAGCAGATAAGGCGCTTTTTGAGGTGCAG TTGCACGTACCCCCCGACGCCCGATCGGTGTGCTTGCGAATATTCCTTCC AACGAATTTCCCAGAAGACCGACCAGGTGAGACCATTCTTCGAACGCTTT GAACAACGTTTTCCTCTCCAGAAGCTGTCGATGCAACATCAATTTTTTTA ACTTCATCCCTCCGCACAAGTTTCCAGCCAAATTCTTTGACATGGTGTTG TTTTTCTTGTCGCCCTTCGACTCTCTCCTTTCTTGGACAGTTTTGCAGCT GCTGTCTCAGGTGCAGCACCCGTGGGTGAACCAATACATGCAGGTAGTCG GGCACCCACGGTACGCGAACTGGGACGGCAACGCCGCGTGTACAGGCAGC CCCGAATACCTCGTCGGCAACATCATTGCGGAGATTGCCCAGGAGTTTCG TAGCAAGAGCGGCGCCAATGCCGCCGCCACCAACGGCGCCAGCGCGACAG GCGGGCCGTCGCTCGCCGCGTCGACGCAGCAGCAGCAGTCGCAATACGGG CAGCCTACAGTAGCGCAGCCAACCTATGGCCACTACCCGCAGCTGTCTGG AGCTTCGTATTACAACCGCATGTCGGGGACAGCAGGGCCCGCCTCCACCG CGGCCAACGATGCCGGAGCCGCCGCCGGAGCCGGAGCCGCTTATCTGCAG GGGCAGCCAGGGTACGGACCTGGCAGACAATCCATCGCTCGCAGCATGGG GACCGCCAGCGCATTTGGCGGCGACCCGCTGCGCCAAGGGGCCGGCGTCG CCTCTGACGGAGCCGGAGTCGCGGGCGGCCCGACCCAAGGGGCCTTCTGG GGCGGGAACGCCGCGCAAAGAAATGGCAGCGGCGGCGTTAGCAGCGGCAG CGGCGGCGCCAGCGGCGTCGGCGGCGGTACCAGCGGCGCAAGCGGGGGCG GCAACAGCACCGCCGGCGGGAGGAGCGGTAAGCTGGACGAGAGTGAGCAC CACGTGCCGCTGCCGCCGGTCCCCGCCCGCTTCAACGAGCTCGAAAATAT GACGCTGCCGCAGCTGCGGCGACTGCTGGAGGACGACGTCGCTCGCCGCG CGCTGCTGGAGGGGATGCCGTCTGTCGCCGGCATGCGCGAAGTCCGCGCG GACATGAGGCGCGGCAATGCCCAGGTGGCCGAGGCCACGCTAGCCAAGGC GGGCCAGCTGGCGGCGCAGCGCGCCGAGGCGGCGCAGCTGCAGGCGCAGC TCCGAGAACTCTGCGACGAACACGCCGGAACGGCGCAGGCGCACGCGCGG CTGACCGGCGGCGGCGATGATGGCGAGATCCTGCGCAAGCTAAAGGCAGC CGCCAAGGAGGCGGAGCGGGCGTCGCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1198:4476..5953+

>mRNA_P-wetherbeei_contig1198.4.1 ID=mRNA_P-wetherbeei_contig1198.4.1|Name=mRNA_P-wetherbeei_contig1198.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1017bp|location=Sequence derived from alignment at P-wetherbeei_contig1198:4476..5953+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCTTGGCTCTTCGGTAAGAAGGGCGGCGGCGGCACGGGCGTTCATAG
AGACCTGGCAGACTGCCGAGATCGGCAGATCGCAAATATGCAGCAAATGG
TCCATGGGCTCGAATGTAAGCAAGCAGATAAGGCGCTTTTTGAGGTGCAG
TTGCACGTACCCCCCGACGCCCGATCGGTGTGCTTGCGAATATTCCTTCC
AACGAATTTCCCAGAAGACCGACCAGTTTTGCAGCTGCTGTCTCAGGTGC
AGCACCCGTGGGTGAACCAATACATGCAGGTAGTCGGGCACCCACGGTAC
GCGAACTGGGACGGCAACGCCGCGTGTACAGGCAGCCCCGAATACCTCGT
CGGCAACATCATTGCGGAGATTGCCCAGGAGTTTCGTAGCAAGAGCGGCG
CCAATGCCGCCGCCACCAACGGCGCCAGCGCGACAGGCGGGCCGTCGCTC
GCCGCGTCGACGCAGCAGCAGCAGTCGCAATACGGGCAGCCTACAGTAGC
GCAGCCAACCTATGGCCACTACCCGCAGCTCAGCGGCAGCGGCGGCGCCA
GCGGCGTCGGCGGCGGTACCAGCGGCGCAAGCGGGGGCGGCAACAGCACC
GCCGGCGGGAGGAGCGGTAAGCTGGACGAGAGTGAGCACCACGTGCCGCT
GCCGCCGGTCCCCGCCCGCTTCAACGAGCTCGAAAATATGACGCTGCCGC
AGCTGCGGCGACTGCTGGAGGACGACGTCGCTCGCCGCGCGCTGCTGGAG
GGGATGCCGTCTGTCGCCGGCATGCGCGAAGTCCGCGCGGACATGAGGCG
CGGCAATGCCCAGGTGGCCGAGGCCACGCTAGCCAAGGCGGGCCAGCTGG
CGGCGCAGCGCGCCGAGGCGGCGCAGCTGCAGGCGCAGCTCCGAGAACTC
TGCGACGAACACGCCGGAACGGCGCAGGCGCACGCGCGGCTGACCGGCGG
CGGCGATGATGGCGAGATCCTGCGCAAGCTAAAGGCAGCCGCCAAGGAGG
CGGAGCGGGCGTCGCAG
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