mRNA_P-wetherbeei_contig1185.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1185.3.1 vs. uniprot
Match: A0A7S2UVA5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVA5_9STRA) HSP 1 Score: 228 bits (581), Expect = 4.080e-71 Identity = 114/180 (63.33%), Postives = 135/180 (75.00%), Query Frame = 1 Query: 127 WFGGPS-----RDSTKQALISAIKPLQRGLTETPTDRENVEGLIKQLEKMSPTKKPLQSPLINGRWELIYTTSASILGRSRPAQLRPSGPIYQTIDVPNLAARNEETIAPLPFVRFKNAVDAALTPVSDRFVNVQFKKFQLGPLKFDAPESAKGALDTTYLDANMRVARGDKGNVFILIK 651 +FGG + RD K L+ + PL+RGL ET V GL ++LEK++PTK PL SPLINGRW LIYTTS ILGR RP LR GPIYQTIDVPNLAA+NEE I+PLPF+ +N V A LTP S FV+VQF +F LGP+K APESAKGALDTTYLD+NMR++RGDKGN+FIL+K Sbjct: 51 FFGGGASATSKRDQLKTELLEVLGPLKRGLVETEAQASAVAGLAEKLEKVNPTKNPLDSPLINGRWSLIYTTSGQILGRDRPDFLRAKGPIYQTIDVPNLAAKNEEKISPLPFISIQNQVTARLTPKSKSFVDVQFLEFGLGPVKIKAPESAKGALDTTYLDSNMRISRGDKGNLFILVK 230
BLAST of mRNA_P-wetherbeei_contig1185.3.1 vs. uniprot
Match: A0A1D2A911_AUXPR (PAP_fibrillin domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A911_AUXPR) HSP 1 Score: 188 bits (477), Expect = 1.320e-55 Identity = 97/165 (58.79%), Postives = 125/165 (75.76%), Query Frame = 1 Query: 154 TKQALISAIKPLQRGLTETPTDRENVEGLIKQLEKMSPTKKPLQSPLINGRWELIYTTSASILGRSRPAQLRPSGPIYQTIDVPNLAARNEETIAPLPFVRFKNAVDAALTPVSDRFVNVQFKKFQL-GPLKFDAPESAKGALDTTYLDANMRVARGDKGNVFIL 645 +KQ+L+ AI+PLQRGLT TP+D E +EGL+ +LE +PT P+ SPL+NG+WEL+YTTS SILGRSRP+ LRP GPIYQT+D +L +N ET PL NAV+A L P+SD V VQFK+F L G + AP SA+G LDTTYLD ++R++RGDKGN+F+L Sbjct: 50 SKQSLLEAIEPLQRGLTATPSDVERIEGLVVELEGRNPTAAPVNSPLLNGQWELLYTTSDSILGRSRPSFLRPKGPIYQTLDNESLRGKNRET-TPL-----FNAVEAELEPISDSEVAVQFKRFWLAGFIPVPAPASARGRLDTTYLDEDLRISRGDKGNLFVL 208
BLAST of mRNA_P-wetherbeei_contig1185.3.1 vs. uniprot
Match: A0A835ZKP4_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKP4_9STRA) HSP 1 Score: 184 bits (468), Expect = 3.920e-54 Identity = 100/188 (53.19%), Postives = 124/188 (65.96%), Query Frame = 1 Query: 97 SRGVTAKPASWFGGPS---RDSTKQALISAIKPLQRGLTETPTDRENVEGLIKQLEKMSPTKKPLQSPLINGRWELIYTTSASILGRSRPAQLRPSGPIYQTIDVPNLAARNEETIAPLPFVRFKNAVDAALTPVSDRFVNVQFKKFQLGPLKFDAPESAKGALDTTYLDANMRVARGDKGNVFILIK 651 S+G S+FG + + ST+QAL+ AI PL RG + ++ V L +LEK + KKPL+SP +NGRW L YTTS SILG + LR GPIYQ ID NL ARNEET+ PLPFV+F AV+A L P S V V FK+F++GPLK AP SA G LD TYLD +R++RGDKGN+FIL K Sbjct: 39 SKGGGVSMRSFFGSSATTTKVSTRQALLDAIAPLDRGRAASEEQKQEVLELFGKLEKENKEKKPLESPNVNGRWTLTYTTSQSILGLNTIRPLRSVGPIYQDIDAVNLKARNEETVKPLPFVKFTRAVNAVLEPQSASKVKVLFKQFEIGPLKVKAPASAIGFLDVTYLDPTLRLSRGDKGNIFILQK 226
BLAST of mRNA_P-wetherbeei_contig1185.3.1 vs. uniprot
Match: D7FWB1_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWB1_ECTSI) HSP 1 Score: 184 bits (466), Expect = 1.060e-53 Identity = 89/173 (51.45%), Postives = 119/173 (68.79%), Query Frame = 1 Query: 133 GGPSRDSTKQALISAIKPLQRGLTETPTDRENVEGLIKQLEKMSPTKKPLQSPLINGRWELIYTTSASILGRSRPAQLRPSGPIYQTIDVPNLAARNEETIAPLPFVRFKNAVDAALTPVSDRFVNVQFKKFQLGPLKFDAPESAKGALDTTYLDANMRVARGDKGNVFILIK 651 G R + KQ L+ AI PL+RGLT + D+ VE L +++EK++P K L SPL+NGRWEL+YTTS SIL + P +RPSGPIYQ ID P L A N + I P+PF++ V A LTP + +VQFK+F +GPLK APE A+ A+D TY+D +RV RG KGN+F+L++ Sbjct: 57 GSSKRATAKQELLDAIVPLKRGLTASDEDKAVVEKLAQKVEKLNPNPKSLSSPLVNGRWELVYTTSMSILSKKNPV-MRPSGPIYQDIDAPGLRALNAQYIQPIPFLKMPYQVSAELTPTTSSATDVQFKEFTVGPLKIKAPERAQSAIDITYVDDEVRVTRGSKGNLFVLVR 228
BLAST of mRNA_P-wetherbeei_contig1185.3.1 vs. uniprot
Match: A0A7S0CXK8_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CXK8_MICPS) HSP 1 Score: 183 bits (464), Expect = 2.250e-53 Identity = 99/177 (55.93%), Postives = 122/177 (68.93%), Query Frame = 1 Query: 130 FGG----PSRDSTKQALISAIKPLQRGLTETPTDRENVEGLIKQLEKMSPTKKPLQSPLINGRWELIYTTSASILGRSRPAQLRPSGPIYQTIDVPNLAARNEETIAPLPFVRFKNAVDAALTPVSDRFVNVQFKKFQL-GPLKFDAPESAKGALDTTYLDANMRVARGDKGNVFIL 645 FGG RD+ K AL++AI+ +RG+T + + ++ L LE+++P KK L+S ING WEL+YTTSASILG +RP RP GPIYQTID L ARN ET F NAVDA LTP S VNVQF KFQ+ G +K DAP SA+GALDTTYLDA++RV RGDKGN+F+L Sbjct: 53 FGGGGSAAKRDAAKAALLAAIEGCERGVTASDDLKNQIDALASALERLNPNKKALRSEFINGEWELLYTTSASILGSNRPWPFRPIGPIYQTIDTDRLRARNRETFP------FFNAVDADLTPTSLSGVNVQFVKFQIFGVIKVDAPASARGALDTTYLDADIRVGRGDKGNLFVL 223
BLAST of mRNA_P-wetherbeei_contig1185.3.1 vs. uniprot
Match: A4RTM2_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RTM2_OSTLU) HSP 1 Score: 177 bits (450), Expect = 3.100e-51 Identity = 94/171 (54.97%), Postives = 120/171 (70.18%), Query Frame = 1 Query: 142 SRDSTKQALISAIKPLQRGLTETPTDRENVEGLIKQLEKMSPTKKPLQSPLINGRWELIYTTSASILGRSRPAQLRPSGPIYQTIDVPNLAARNEETIAPLPFVRFKNAVDAALTPVSDRFVNVQFKKFQL--GPLKFDAPESAKGALDTTYLDANMRVARGDKGNVFILI 648 +R+ K+AL+SAI+PL+RG+ + ++ +V+ L LE ++P K L +P ING WEL+YTTSASILG +PA LRPSG IYQTID +L ARN ET F NAV A LTP SD V VQFKKF + G +K APE A+GALD TY+D +RV+RGDKGN+F+LI Sbjct: 55 AREDAKRALLSAIEPLERGVKASDEEKAHVDALATALEALNPNPKSLAAPCINGEWELVYTTSASILGTKKPAFLRPSGKIYQTIDAESLRARNRETWP------FYNAVAAELTPTSDSAVKVQFKKFFVFGGLIKVTAPERARGALDITYVDDEVRVSRGDKGNLFVLI 219
BLAST of mRNA_P-wetherbeei_contig1185.3.1 vs. uniprot
Match: E1ZGX1_CHLVA (PAP_fibrillin domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZGX1_CHLVA) HSP 1 Score: 175 bits (443), Expect = 4.790e-51 Identity = 97/164 (59.15%), Postives = 117/164 (71.34%), Query Frame = 1 Query: 157 KQALISAIKPLQRGLTETPTDRENVEGLIKQLEKMSPTKKPLQSPLINGRWELIYTTSASILGRSRPAQLRPSGPIYQTIDVPNLAARNEETIAPLPFVRFKNAVDAALTPVSDRFVNVQFKKFQ-LGPLKFDAPESAKGALDTTYLDANMRVARGDKGNVFIL 645 KQ L+ AI PL+RGLT T DR+ VE L +LE+M+PTK+PL S LING+WEL+YTTS SILG S+PA LRPSGPIYQ ID L ARN+ET APL N V A L P SD V VQFK+F+ LG + AP SA G L TYLD +RV+RG++GN+F+L Sbjct: 19 KQELLEAIAPLKRGLTATDEDRQQVERLASKLERMNPTKRPLASDLINGQWELLYTTSDSILGMSKPAFLRPSGPIYQVIDAKALTARNKET-APL-----FNQVSAELIPESDSKVKVQFKEFKILGLVPIKAPPSAVGELAVTYLDDELRVSRGNRGNLFVL 176
BLAST of mRNA_P-wetherbeei_contig1185.3.1 vs. uniprot
Match: A0A383VK47_TETOB (PAP_fibrillin domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VK47_TETOB) HSP 1 Score: 175 bits (444), Expect = 6.120e-51 Identity = 99/184 (53.80%), Postives = 126/184 (68.48%), Query Frame = 1 Query: 130 FGGPSR----DST------KQALISAIKPLQRGLTETPTDRENVEGLIKQLEKMSPTKKPLQSPLINGRWELIYTTSASILGRSRPAQLRPSGPIYQTIDVPNLAARNEETIAPLPFVRFKNAVDAALTPVSDRFVNVQFKKFQL-GPLKFDAPESAKGALDTTYLDANMRVARGDKGNVFILI 648 FGGP R DS K+ L+ I+PL+RGL T D+E VE +++QLE+++PT KPL+SP +NG+W L+YTTS SILGRS+PA L PSGPIYQ +D PNL A N+ET APL N V A L P+S V VQFK F++ G + AP SAKG L TYLD MR++RGDKGN+F+L+ Sbjct: 11 FGGPKRAKAQDSAALRQQKKEELLELIEPLKRGLAATAEDQEAVEEVVQQLERLNPTPKPLESPYLNGQWRLVYTTSDSILGRSKPAFLWPSGPIYQLLDGPNLRAANKET-APL-----FNQVYAELQPMSVNKVAVQFKTFKIFGLIPISAPASAKGELAMTYLDDEMRISRGDKGNLFVLL 188
BLAST of mRNA_P-wetherbeei_contig1185.3.1 vs. uniprot
Match: C1EEW2_MICCC (PAP_fibrillin domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EEW2_MICCC) HSP 1 Score: 175 bits (443), Expect = 6.350e-51 Identity = 94/172 (54.65%), Postives = 116/172 (67.44%), Query Frame = 1 Query: 133 GGPSRDSTKQALISAIKPLQRGLTETPTDRENVEGLIKQLEKMSPTKKPLQSPLINGRWELIYTTSASILGRSRPAQLRPSGPIYQTIDVPNLAARNEETIAPLPFVRFKNAVDAALTPVSDRFVNVQFKKFQL-GPLKFDAPESAKGALDTTYLDANMRVARGDKGNVFIL 645 G R++ K AL+ AI+ QRG+ + D VE LE+++P ++PL SPL+NG WEL+YTTSASILG ++P LRPSGPIYQ IDV L ARN ET F NAVDA LTP S VNVQF KF + G DAP SA+GALD TYLD + RV+RGD+GN+F+L Sbjct: 11 GSKRREAAKAALLEAIEGTQRGVAASEEDVAAVEAAASALERLNPNRQPLASPLVNGEWELLYTTSASILGANKPWFLRPSGPIYQAIDVGRLRARNRETFP------FFNAVDADLTPTSRSAVNVQFVKFFIFGVAPVDAPPSARGALDVTYLDDDTRVSRGDRGNLFVL 176
BLAST of mRNA_P-wetherbeei_contig1185.3.1 vs. uniprot
Match: A0A7S0I796_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0I796_MICPS) HSP 1 Score: 175 bits (444), Expect = 2.610e-50 Identity = 95/172 (55.23%), Postives = 115/172 (66.86%), Query Frame = 1 Query: 133 GGPSRDSTKQALISAIKPLQRGLTETPTDRENVEGLIKQLEKMSPTKKPLQSPLINGRWELIYTTSASILGRSRPAQLRPSGPIYQTIDVPNLAARNEETIAPLPFVRFKNAVDAALTPVSDRFVNVQFKKFQ-LGPLKFDAPESAKGALDTTYLDANMRVARGDKGNVFIL 645 G R++ K AL+ AI+ QRG+ + D VE LE+++P + PL SPL+NG WEL+YTTSASILG ++P LRPSGPIYQTIDV L ARN ET F NAVDA LTP S VNV+F KF LG DAP SA+GALD TYLD RV+RGD+GN+F+L Sbjct: 64 GSKRREAAKAALLEAIEGTQRGVAASEEDVAAVEAAASALERLNPNRSPLASPLVNGEWELLYTTSASILGANKPWFLRPSGPIYQTIDVGRLRARNRETFP------FFNAVDADLTPTSRSAVNVRFVKFFILGVAPVDAPPSARGALDVTYLDDETRVSRGDRGNLFVL 229 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1185.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1185.3.1 >prot_P-wetherbeei_contig1185.3.1 ID=prot_P-wetherbeei_contig1185.3.1|Name=mRNA_P-wetherbeei_contig1185.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=208bp MRRTTLITLLFWAADAAAMAAVSRGVTAKPASWFGGPSRDSTKQALISAIback to top mRNA from alignment at P-wetherbeei_contig1185:5295..6455+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1185.3.1 ID=mRNA_P-wetherbeei_contig1185.3.1|Name=mRNA_P-wetherbeei_contig1185.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1161bp|location=Sequence derived from alignment at P-wetherbeei_contig1185:5295..6455+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1185:5295..6455+ >mRNA_P-wetherbeei_contig1185.3.1 ID=mRNA_P-wetherbeei_contig1185.3.1|Name=mRNA_P-wetherbeei_contig1185.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=624bp|location=Sequence derived from alignment at P-wetherbeei_contig1185:5295..6455+ (Phaeothamnion wetherbeei SAG_119_79)back to top |