mRNA_P-wetherbeei_contig11651.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11651.2.1
Unique NamemRNA_P-wetherbeei_contig11651.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11651.2.1 vs. uniprot
Match: A0A7C4TUC6_9HYPH (Tyrosine recombinase XerC n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TUC6_9HYPH)

HSP 1 Score: 427 bits (1097), Expect = 1.480e-147
Identity = 216/301 (71.76%), Postives = 249/301 (82.72%), Query Frame = 1
Query:   61 DLAAATERWLDHLVLERGHSDLTREAYARDIAHLAHYLTRQLGRPPGMSDLAALDARAFRGFMASRRQSGASSRTLARTMSALRTFFRWLENDEIIRNRAILAVALPKIGHSVPKPLTVDKARAVVDGGMAAEIDWVSARDVAVLLLLYGSGLRISEAVGLKVKDAPTAERDVLRITGKGGKERAVPVLPVAIAAIDRYRALVPYMLERDGRLFLGAKGGPLSPRLIQLAMERLRAELSLPDTATPHALRHSFATHLLSTGADLRQIQELLGHASLSTTQIYTEVDRDRLLAVYDASHPRS 963
            DLA A   WLDHL  ERGH+ LTR AYARD+    H+L  +LGRPP ++DL AL+A+ FR +M  RR+ GASSR+LAR MSALR+FFRWLE  E+IR+R++L +ALP++  S+PKPLTV+KA AVVD GM A +DWV+AR+VAV LLLYG+GLRISEA+GL  KDAPT +RDVLRI GKGGKER VPVLPV I AI RYRAL+PY L  DG LFLGAKGGPLSPR+IQLAM R+R  L LP TATPHALRHSFATHLLS GADLRQIQELLGHASLSTTQ+YTEVDR RLL VYDA+HPR+
Sbjct:   16 DLARAIGAWLDHLERERGHAALTRVAYARDLTRFVHFLADELGRPPSIADLEALEAKTFRRYMGRRRRDGASSRSLARAMSALRSFFRWLEAHELIRSRSLLTIALPRVSRSLPKPLTVEKAGAVVDAGMDAALDWVAARNVAVFLLLYGAGLRISEALGLAAKDAPTPDRDVLRILGKGGKERLVPVLPVIIEAIARYRALLPYPLRPDGPLFLGAKGGPLSPRIIQLAMARMRDALGLPITATPHALRHSFATHLLSAGADLRQIQELLGHASLSTTQVYTEVDRARLLEVYDAAHPRA 316          
BLAST of mRNA_P-wetherbeei_contig11651.2.1 vs. uniprot
Match: A0A2W4RCX0_9PROT (Tyrosine recombinase XerC n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RCX0_9PROT)

HSP 1 Score: 420 bits (1079), Expect = 8.660e-145
Identity = 212/293 (72.35%), Postives = 246/293 (83.96%), Query Frame = 1
Query:   85 WLDHLVLERGHSDLTREAYARDIAHLAHYLTRQLGRPPGMSDLAALDARAFRGFMASRRQSGASSRTLARTMSALRTFFRWLENDEIIRNRAILAVALPKIGHSVPKPLTVDKARAVVDGGMAAEIDWVSARDVAVLLLLYGSGLRISEAVGLKVKDAPTAERDVLRITGKGGKERAVPVLPVAIAAIDRYRALVPYMLERDGRLFLGAKGGPLSPRLIQLAMERLRAELSLPDTATPHALRHSFATHLLSTGADLRQIQELLGHASLSTTQIYTEVDRDRLLAVYDASHPRS 963
            WL HL  ERG+S LT EAY RD+     +   QLGR P ++DL  LD R FRGF+ASRR+   S+R+LART+SALRTFFRWLE++  I++RA+ +VA PK+ H VPKPLTV KA A++DGGMAAE+DW++ARD AVLLLLYGSGLRISEA+GLK  +APTA RDVLRITGKGGKER VPVLP+ IAAI+RYR L PY L+ DG LFLGAKGGPLSPR+IQLA+ R R+ L LP+TATPHALRHSFATHLLS GADLRQIQELLGHASLSTTQIYTEVDR+RLLAVYDA+HPR+
Sbjct:   24 WLAHLNAERGYSQLTCEAYGRDLRQFLAFWRGQLGRTPSIADLPLLDTRTFRGFLASRRREKVSNRSLARTLSALRTFFRWLESEAGIKSRAVHSVARPKVPHGVPKPLTVAKALALIDGGMAAELDWITARDTAVLLLLYGSGLRISEALGLKAGEAPTAGRDVLRITGKGGKERIVPVLPITIAAIERYRQLCPYPLDPDGPLFLGAKGGPLSPRIIQLAIARARSALGLPETATPHALRHSFATHLLSAGADLRQIQELLGHASLSTTQIYTEVDRERLLAVYDAAHPRA 316          
BLAST of mRNA_P-wetherbeei_contig11651.2.1 vs. uniprot
Match: A0A2W4MUT9_9PROT (Tyrosine recombinase XerC n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4MUT9_9PROT)

HSP 1 Score: 417 bits (1071), Expect = 4.220e-143
Identity = 207/294 (70.41%), Postives = 247/294 (84.01%), Query Frame = 1
Query:   82 RWLDHLVLERGHSDLTREAYARDIAHLAHYLTRQLGRPPGMSDLAALDARAFRGFMASRRQSGASSRTLARTMSALRTFFRWLENDEIIRNRAILAVALPKIGHSVPKPLTVDKARAVVDGGMAAEIDWVSARDVAVLLLLYGSGLRISEAVGLKVKDAPTAERDVLRITGKGGKERAVPVLPVAIAAIDRYRALVPYMLERDGRLFLGAKGGPLSPRLIQLAMERLRAELSLPDTATPHALRHSFATHLLSTGADLRQIQELLGHASLSTTQIYTEVDRDRLLAVYDASHPRS 963
            RWLDHL  ERG++D TRE+Y RD+     Y   QLGR P ++D+  L+ R FRGF+ASRR+  AS+R+LART+SALR+FFRWLEN++I RNRA+L+VA PK+ H VPKPLTV+KA  +V  G+A++ +W+S RD AVLLLLYGSGLRISEA+GLK  +APT E DVLRI GKGGKER VPVLP+ I+AI+RYR L PY LE DG LFLGAKGGPLSPR+IQLA+ R+R+ L LP+TATPHALRHSFATHLLS GADLRQIQELLGHASLSTTQIYTEV+R+RLLAVYDA+HPR+
Sbjct:   54 RWLDHLSRERGYADHTRESYGRDLRQFLTYWQLQLGRSPCLADVEHLEPRTFRGFLASRRRQEASNRSLARTLSALRSFFRWLENEQIARNRAVLSVARPKVPHGVPKPLTVEKAAVLVTDGVASDEEWISVRDTAVLLLLYGSGLRISEALGLKADEAPTRENDVLRIVGKGGKERVVPVLPITISAIERYRQLCPYPLEPDGPLFLGAKGGPLSPRIIQLAIARVRSALGLPETATPHALRHSFATHLLSAGADLRQIQELLGHASLSTTQIYTEVNRERLLAVYDAAHPRA 347          
BLAST of mRNA_P-wetherbeei_contig11651.2.1 vs. uniprot
Match: A0A7C2R239_9HYPH (Tyrosine recombinase XerC n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2R239_9HYPH)

HSP 1 Score: 415 bits (1066), Expect = 9.110e-143
Identity = 212/306 (69.28%), Postives = 244/306 (79.74%), Query Frame = 1
Query:   46 AATHGDLAAATERWLDHLVLERGHSDLTREAYARDIAHLAHYLTRQLGRPPGMSDLAALDARAFRGFMASRRQSGASSRTLARTMSALRTFFRWLENDEIIRNRAILAVALPKIGHSVPKPLTVDKARAVVDGGMAAEIDWVSARDVAVLLLLYGSGLRISEAVGLKVKDAPTAERDVLRITGKGGKERAVPVLPVAIAAIDRYRALVPYMLERDGRLFLGAKGGPLSPRLIQLAMERLRAELSLPDTATPHALRHSFATHLLSTGADLRQIQELLGHASLSTTQIYTEVDRDRLLAVYDASHPRS 963
            AAT  DLAAA   W DHL  ERG +D T EAY RD+  L  ++   LGRP G++DLA LDA+ FR FMA+RR++G S R+LARTMSALR+F RWLE  EI+ N +IL VA+PK+ H +PKPLTV+KA  VVDGG A E+DWV+ARD AVLLLLYG GLRISEA+GL+ +DAP A RD LRI GKGGKER VPVLPV  +A+ RY AL PY L  DG LF+GAKGG LSPR++QLAM RLR EL LPDTATPHALRHSFATHLL+ GADLRQIQELLGHASLSTTQ+YTEVDR  LLAVYD +HPR+
Sbjct:   16 AATGEDLAAAAAAWADHLAHERGAADNTLEAYGRDVRQLLAWMEGDLGRPAGLADLARLDAKHFRAFMAARRRAGLSGRSLARTMSALRSFLRWLEAQEIVLNLSILQVAMPKVPHGIPKPLTVEKAAEVVDGGAAVELDWVAARDAAVLLLLYGCGLRISEALGLRRRDAPVAGRDSLRIAGKGGKERLVPVLPVVQSAVARYLALCPYRLAGDGPLFVGAKGGELSPRIVQLAMARLRGELGLPDTATPHALRHSFATHLLAAGADLRQIQELLGHASLSTTQVYTEVDRAHLLAVYDKAHPRA 321          
BLAST of mRNA_P-wetherbeei_contig11651.2.1 vs. uniprot
Match: A0A6I0EUA8_HYPSQ (Tyrosine recombinase XerC n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EUA8_HYPSQ)

HSP 1 Score: 414 bits (1064), Expect = 1.480e-142
Identity = 216/301 (71.76%), Postives = 239/301 (79.40%), Query Frame = 1
Query:   61 DLAAATERWLDHLVLERGHSDLTREAYARDIAHLAHYLTRQLGRPPGMSDLAALDARAFRGFMASRRQSGASSRTLARTMSALRTFFRWLENDEIIRNRAILAVALPKIGHSVPKPLTVDKARAVVDGGMAAEIDWVSARDVAVLLLLYGSGLRISEAVGLKVKDAPTAERDVLRITGKGGKERAVPVLPVAIAAIDRYRALVPYMLERDGRLFLGAKGGPLSPRLIQLAMERLRAELSLPDTATPHALRHSFATHLLSTGADLRQIQELLGHASLSTTQIYTEVDRDRLLAVYDASHPRS 963
            DL  A   WL HL  ERGH++ T EAYARD+     YL  QLG PP ++DLA LD +AFRGF+ASRR++G  SR+LAR++SALR  FRWLE   +I NRAIL +A+PK+ HSVPKPLTV KA  VVD G AAE DWV ARD A LLLLYGSGLRI+EA+ LKVKDAPTA RDVLRI GKGGKER VPVLPV  AA++RY AL PY LE D  LF GAKGGPLSPR+IQLAM+ LR  L LP TATPHALRHSFATHLLS G DLRQIQELLGHASLSTTQ YTEVDRDRLL VYDA+HPRS
Sbjct:   15 DLERAVAAWLAHLRHERGHAEKTLEAYARDVRQFLAYLGVQLGHPPCLADLARLDLKAFRGFLASRRRTGTVSRSLARSLSALRQLFRWLEAQALIDNRAILQLAMPKVPHSVPKPLTVAKAADVVDRGPAAEFDWVHARDAAALLLLYGSGLRIAEALSLKVKDAPTAGRDVLRIKGKGGKERLVPVLPVVRAAVERYMALCPYPLESDAALFRGAKGGPLSPRIIQLAMQHLREALDLPPTATPHALRHSFATHLLSAGGDLRQIQELLGHASLSTTQAYTEVDRDRLLNVYDAAHPRS 315          
BLAST of mRNA_P-wetherbeei_contig11651.2.1 vs. uniprot
Match: UPI0009314D08 (tyrosine recombinase XerC n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI0009314D08)

HSP 1 Score: 409 bits (1051), Expect = 1.560e-140
Identity = 213/315 (67.62%), Postives = 243/315 (77.14%), Query Frame = 1
Query:   19 TADAQAQDTAATHGDLAAATERWLDHLVLERGHSDLTREAYARDIAHLAHYLTRQLGRPPGMSDLAALDARAFRGFMASRRQSGASSRTLARTMSALRTFFRWLENDEIIRNRAILAVALPKIGHSVPKPLTVDKARAVVDGGMAAEIDWVSARDVAVLLLLYGSGLRISEAVGLKVKDAPTAERDVLRITGKGGKERAVPVLPVAIAAIDRYRALVPYMLERDGRLFLGAKGGPLSPRLIQLAMERLRAELSLPDTATPHALRHSFATHLLSTGADLRQIQELLGHASLSTTQIYTEVDRDRLLAVYDASHPRS 963
            TAD  A+       DL  A   WL HL  ERGH+D T EAY RD+     +L R LG PP ++DLA LD + FRGF+ASRR++G  SR+LAR++SALR  FRWLE  +I+ NRAIL +A+PK+ HSVPKPLTV KA  VV+    AE+DWV+ARDVAVLLLLYG GLRI+EA+ LK KDAPT ERDVLR+ GKG KER VPVLP+   AI RYR L PY LE D  +F GAKGGPLSPR+IQLAM+RLR EL LP TATPHALRHSFATHLLS G DLRQIQELLGHASLSTTQ YTEVDR+RLLAVYDA+HPRS
Sbjct:    4 TADDIAELELPLGADLERAVAAWLAHLRHERGHADKTLEAYDRDVRQFLAFLARDLGHPPCLADLARLDLKVFRGFLASRRRTGTVSRSLARSLSALRQLFRWLEAKDIVENRAILKLAMPKVPHSVPKPLTVAKAAEVVEARGEAELDWVNARDVAVLLLLYGCGLRIAEALSLKTKDAPTVERDVLRVVGKGEKERLVPVLPIVRQAIARYRELCPYQLEPDAPIFRGAKGGPLSPRIIQLAMQRLRGELGLPATATPHALRHSFATHLLSAGGDLRQIQELLGHASLSTTQAYTEVDRERLLAVYDAAHPRS 318          
BLAST of mRNA_P-wetherbeei_contig11651.2.1 vs. uniprot
Match: A0A6I3KKK3_9HYPH (Tyrosine recombinase XerC n=1 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KKK3_9HYPH)

HSP 1 Score: 408 bits (1048), Expect = 4.010e-140
Identity = 212/301 (70.43%), Postives = 238/301 (79.07%), Query Frame = 1
Query:   61 DLAAATERWLDHLVLERGHSDLTREAYARDIAHLAHYLTRQLGRPPGMSDLAALDARAFRGFMASRRQSGASSRTLARTMSALRTFFRWLENDEIIRNRAILAVALPKIGHSVPKPLTVDKARAVVDGGMAAEIDWVSARDVAVLLLLYGSGLRISEAVGLKVKDAPTAERDVLRITGKGGKERAVPVLPVAIAAIDRYRALVPYMLERDGRLFLGAKGGPLSPRLIQLAMERLRAELSLPDTATPHALRHSFATHLLSTGADLRQIQELLGHASLSTTQIYTEVDRDRLLAVYDASHPRS 963
            DL  A   WL HL  ERGH++ T EAYARD+     +L +QLG  P ++DLA LD + FRGF+ASRR+SGA SR+LAR++SALR  FRWLE  ++I NR IL +A+PKI HSVPKPLTV KA  VVD G  AE+DWV ARD AVL+LLYGSGLRI+EA+ L  KDAPT ERDVLRI GKGGKER VPVLPV   A+ RY AL PY L  D  LF GAKGGPLSPR+IQLAM+RLR  L LP TATPHALRHSFATHLLS G DLRQIQELLGHASLSTTQ+YTEVDRDRLLAVYDA+HPRS
Sbjct:   15 DLERAVGAWLSHLQHERGHAEKTLEAYARDVRQFLAFLGQQLGHAPCLADLAHLDLKTFRGFLASRRRSGAVSRSLARSLSALRQLFRWLEAQKLIENRTILQLAMPKIPHSVPKPLTVAKAADVVDPGAGAELDWVMARDAAVLMLLYGSGLRIAEAMSLNAKDAPTPERDVLRIKGKGGKERLVPVLPVVREAVARYVALCPYPLVPDEPLFRGAKGGPLSPRIIQLAMQRLREALDLPPTATPHALRHSFATHLLSAGGDLRQIQELLGHASLSTTQVYTEVDRDRLLAVYDAAHPRS 315          
BLAST of mRNA_P-wetherbeei_contig11651.2.1 vs. uniprot
Match: A0A2S5PE28_HYPSQ (Tyrosine recombinase XerC n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5PE28_HYPSQ)

HSP 1 Score: 405 bits (1040), Expect = 7.080e-139
Identity = 206/301 (68.44%), Postives = 239/301 (79.40%), Query Frame = 1
Query:   61 DLAAATERWLDHLVLERGHSDLTREAYARDIAHLAHYLTRQLGRPPGMSDLAALDARAFRGFMASRRQSGASSRTLARTMSALRTFFRWLENDEIIRNRAILAVALPKIGHSVPKPLTVDKARAVVDGGMAAEIDWVSARDVAVLLLLYGSGLRISEAVGLKVKDAPTAERDVLRITGKGGKERAVPVLPVAIAAIDRYRALVPYMLERDGRLFLGAKGGPLSPRLIQLAMERLRAELSLPDTATPHALRHSFATHLLSTGADLRQIQELLGHASLSTTQIYTEVDRDRLLAVYDASHPRS 963
            DL  A   WL HL  ERG++  T +AY RD+     +L R LG PP + DL  LDA+A R F+ SRR++G  SR+LART+SALRTFFRWLE  + ++NRA+L VALPK+ HSVPKPL  +KA AVV  GM A++DWV+ARD+AVLLLLYG GLRISEA+G+ V+DAP   RD LRI GKGGKER VPVLPV  +++ RY AL PY    D  LFLGAKGGPLSPRLIQLAMER+R EL+LP TATPHALRHSFATHLLS GADLRQIQELLGHASLSTTQ+YTEVDRDRLLAVYDA+HPR+
Sbjct:   17 DLDRAFAAWLSHLAHERGYAGPTLDAYGRDLRQFLGFLGRHLGHPPCLGDLGRLDAKAVRAFLTSRRRAGTQSRSLARTLSALRTFFRWLEAGDTLKNRAVLQVALPKVPHSVPKPLNTEKALAVVTPGMEADLDWVAARDIAVLLLLYGCGLRISEALGILVRDAPLPGRDTLRILGKGGKERMVPVLPVTQSSVARYMALCPYPQSPDNPLFLGAKGGPLSPRLIQLAMERMRDELALPATATPHALRHSFATHLLSAGADLRQIQELLGHASLSTTQVYTEVDRDRLLAVYDAAHPRA 317          
BLAST of mRNA_P-wetherbeei_contig11651.2.1 vs. uniprot
Match: A0A537RPV0_9PROT (Tyrosine recombinase XerC n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RPV0_9PROT)

HSP 1 Score: 405 bits (1040), Expect = 7.330e-139
Identity = 209/301 (69.44%), Postives = 238/301 (79.07%), Query Frame = 1
Query:   61 DLAAATERWLDHLVLERGHSDLTREAYARDIAHLAHYLTRQLGRPPGMSDLAALDARAFRGFMASRRQSGASSRTLARTMSALRTFFRWLENDEIIRNRAILAVALPKIGHSVPKPLTVDKARAVVDGGMAAEIDWVSARDVAVLLLLYGSGLRISEAVGLKVKDAPTAERDVLRITGKGGKERAVPVLPVAIAAIDRYRALVPYMLERDGRLFLGAKGGPLSPRLIQLAMERLRAELSLPDTATPHALRHSFATHLLSTGADLRQIQELLGHASLSTTQIYTEVDRDRLLAVYDASHPRS 963
            D   + E WL HL  ERG +  T  AY RD+     +L  +LG  P ++DLA LDA+ FR FMA+RR++GA SR+LARTMSALR FFRWLE  EI RNR++L VA+PK+ H +PKPLTV+KA AV+DGG  AE+DWV ARD AVLLLLYGSGLRISEA+GL  KDAP   RDVLRITGKGGKER VPVLPV  AA+ RY AL PY L  DG LFLGAKGG LSPR++QL MER+R  L LP+TATPHALRHSFATHLLS GADLRQIQELLGHASLSTTQ+YTEVDR RLLAVYD +HPR+
Sbjct:   18 DARRSAEAWLVHLAHERGAAVNTLSAYERDLRQFLGWLRGELGHAPCLADLARLDAKRFRAFMAARRRAGAQSRSLARTMSALRVFFRWLEAQEITRNRSLLQVAMPKVPHGIPKPLTVEKAAAVMDGGAGAELDWVMARDAAVLLLLYGSGLRISEALGLLRKDAPLDGRDVLRITGKGGKERLVPVLPVTQAAVARYLALCPYPLAADGPLFLGAKGGQLSPRIVQLLMERMREGLGLPETATPHALRHSFATHLLSAGADLRQIQELLGHASLSTTQVYTEVDRTRLLAVYDKAHPRA 318          
BLAST of mRNA_P-wetherbeei_contig11651.2.1 vs. uniprot
Match: A0A7Y4XIK3_HYPSQ (Tyrosine recombinase XerC n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y4XIK3_HYPSQ)

HSP 1 Score: 399 bits (1026), Expect = 1.300e-136
Identity = 202/301 (67.11%), Postives = 238/301 (79.07%), Query Frame = 1
Query:   61 DLAAATERWLDHLVLERGHSDLTREAYARDIAHLAHYLTRQLGRPPGMSDLAALDARAFRGFMASRRQSGASSRTLARTMSALRTFFRWLENDEIIRNRAILAVALPKIGHSVPKPLTVDKARAVVDGGMAAEIDWVSARDVAVLLLLYGSGLRISEAVGLKVKDAPTAERDVLRITGKGGKERAVPVLPVAIAAIDRYRALVPYMLERDGRLFLGAKGGPLSPRLIQLAMERLRAELSLPDTATPHALRHSFATHLLSTGADLRQIQELLGHASLSTTQIYTEVDRDRLLAVYDASHPRS 963
            DL  A   WL HL  ERG S  T+EAYARD+     +L R LG PP +SDLA L+A+  R F++ RR++GA SR+L+RT+SALR FFRWLE +E ++NRA+L +ALPKI HSVPKPL +  A AVV  GM  E+DW++ARD AV++LLYG GLRISEA+ L  + AP A RDV+ ITGKGGKER VP L +  AAI+ Y  L PY L+ D  LFLGA+GGPLSPRLIQLAME+LRA+L LPDTATPHALRHSFATHLLS GADLRQIQELLGHASLSTTQIYTEVDRDRLL+VYDA+HPR+
Sbjct:   23 DLREAVAGWLSHLGSERGQSAATQEAYARDVRQFLGFLKRHLGHPPCLSDLAQLNAKTVRAFLSHRRKAGAISRSLSRTLSALRMFFRWLEREETVKNRAVLQIALPKIPHSVPKPLNIKAAAAVVSPGMPGELDWITARDRAVMMLLYGCGLRISEALSLTPRTAPLAGRDVMHITGKGGKERMVPALAIVSAAIEGYMRLCPYALDADKPLFLGARGGPLSPRLIQLAMEKLRADLGLPDTATPHALRHSFATHLLSAGADLRQIQELLGHASLSTTQIYTEVDRDRLLSVYDAAHPRA 323          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11651.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TUC6_9HYPH1.480e-14771.76Tyrosine recombinase XerC n=1 Tax=Hyphomicrobiales... [more]
A0A2W4RCX0_9PROT8.660e-14572.35Tyrosine recombinase XerC n=1 Tax=Proteobacteria b... [more]
A0A2W4MUT9_9PROT4.220e-14370.41Tyrosine recombinase XerC n=1 Tax=Proteobacteria b... [more]
A0A7C2R239_9HYPH9.110e-14369.28Tyrosine recombinase XerC n=1 Tax=Hyphomicrobiales... [more]
A0A6I0EUA8_HYPSQ1.480e-14271.76Tyrosine recombinase XerC n=1 Tax=Hyphomicrobium s... [more]
UPI0009314D081.560e-14067.62tyrosine recombinase XerC n=1 Tax=Hyphomicrobium s... [more]
A0A6I3KKK3_9HYPH4.010e-14070.43Tyrosine recombinase XerC n=1 Tax=Hyphomicrobium a... [more]
A0A2S5PE28_HYPSQ7.080e-13968.44Tyrosine recombinase XerC n=2 Tax=Hyphomicrobium s... [more]
A0A537RPV0_9PROT7.330e-13969.44Tyrosine recombinase XerC n=1 Tax=Alphaproteobacte... [more]
A0A7Y4XIK3_HYPSQ1.300e-13667.11Tyrosine recombinase XerC n=1 Tax=Hyphomicrobium s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11651contigP-wetherbeei_contig11651:1072..2064 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1267005.KB911257_gene1098
Preferred namexerC
PFAMsPhage_int_SAM_1,Phage_integrase
Model size993
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K03733
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.78e-133
EggNOG OGsCOG4974@1|root,COG4974@2|Bacteria,1QU6A@1224|Proteobacteria,2TS7W@28211|Alphaproteobacteria,3N6DG@45401|Hyphomicrobiaceae
DescriptionBelongs to the 'phage' integrase family. XerC subfamily
Cds size987
COG categoryD
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185920.6928256-CDS-P-wetherbeei_contig11651:1071..20581683185920.6928256-CDS-P-wetherbeei_contig11651:1071..2058Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11651 1072..2058 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185920.703076-UTR-P-wetherbeei_contig11651:2058..20641683185920.703076-UTR-P-wetherbeei_contig11651:2058..2064Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11651 2059..2064 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11651.2.1prot_P-wetherbeei_contig11651.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11651 1072..2058 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11651.2.1

>prot_P-wetherbeei_contig11651.2.1 ID=prot_P-wetherbeei_contig11651.2.1|Name=mRNA_P-wetherbeei_contig11651.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=329bp
MLDDTADAQAQDTAATHGDLAAATERWLDHLVLERGHSDLTREAYARDIA
HLAHYLTRQLGRPPGMSDLAALDARAFRGFMASRRQSGASSRTLARTMSA
LRTFFRWLENDEIIRNRAILAVALPKIGHSVPKPLTVDKARAVVDGGMAA
EIDWVSARDVAVLLLLYGSGLRISEAVGLKVKDAPTAERDVLRITGKGGK
ERAVPVLPVAIAAIDRYRALVPYMLERDGRLFLGAKGGPLSPRLIQLAME
RLRAELSLPDTATPHALRHSFATHLLSTGADLRQIQELLGHASLSTTQIY
TEVDRDRLLAVYDASHPRSATREGMAKA*
back to top

mRNA from alignment at P-wetherbeei_contig11651:1072..2064-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11651.2.1 ID=mRNA_P-wetherbeei_contig11651.2.1|Name=mRNA_P-wetherbeei_contig11651.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=993bp|location=Sequence derived from alignment at P-wetherbeei_contig11651:1072..2064- (Phaeothamnion wetherbeei SAG_119_79)
CAAGGCATGCTGGACGATACCGCCGACGCGCAGGCGCAGGATACGGCCGC AACGCACGGCGACCTGGCGGCTGCCACGGAACGCTGGCTCGATCATCTCG TGCTCGAACGCGGGCATTCGGATCTGACGCGCGAAGCCTATGCCCGCGAC ATCGCCCATCTCGCGCACTATCTGACGCGGCAACTCGGCAGACCCCCTGG CATGTCGGACCTCGCCGCGCTCGACGCCCGGGCGTTTCGCGGCTTCATGG CGAGCCGGCGTCAATCGGGTGCATCGAGCCGGACGCTTGCGCGGACGATG TCGGCACTGCGGACGTTCTTCCGCTGGCTCGAGAACGACGAGATCATCAG GAACCGGGCGATCCTCGCCGTGGCGCTGCCGAAAATCGGGCACAGCGTGC CCAAGCCGCTCACCGTCGACAAGGCGCGCGCCGTCGTGGATGGCGGCATG GCTGCCGAGATCGACTGGGTCAGCGCACGCGATGTGGCGGTGCTGCTGCT GCTCTACGGCTCCGGCCTGCGCATCTCCGAAGCGGTCGGGCTCAAGGTCA AGGACGCACCAACCGCCGAGCGCGACGTGTTGCGGATCACCGGCAAGGGC GGCAAGGAGCGCGCCGTCCCGGTTCTGCCGGTTGCCATCGCCGCCATCGA CCGCTATCGCGCGCTCGTCCCCTACATGCTGGAGCGGGACGGCCGGTTGT TCCTGGGAGCCAAGGGCGGGCCGCTCTCGCCGCGCCTCATTCAGCTCGCC ATGGAGCGCCTGCGCGCAGAGCTTTCGTTGCCCGATACCGCGACGCCGCA TGCGCTGCGGCATTCGTTCGCCACGCATCTGCTGTCGACGGGCGCCGACC TGCGGCAGATCCAGGAACTGCTAGGGCATGCTTCGCTGTCGACGACGCAG ATCTACACTGAAGTCGATCGCGACCGGCTGCTCGCCGTGTACGATGCCAG CCATCCCAGGTCGGCCACGCGCGAAGGCATGGCCAAGGCCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig11651:1072..2064-

>mRNA_P-wetherbeei_contig11651.2.1 ID=mRNA_P-wetherbeei_contig11651.2.1|Name=mRNA_P-wetherbeei_contig11651.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=987bp|location=Sequence derived from alignment at P-wetherbeei_contig11651:1072..2064- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGACGATACCGCCGACGCGCAGGCGCAGGATACGGCCGCAACGCA
CGGCGACCTGGCGGCTGCCACGGAACGCTGGCTCGATCATCTCGTGCTCG
AACGCGGGCATTCGGATCTGACGCGCGAAGCCTATGCCCGCGACATCGCC
CATCTCGCGCACTATCTGACGCGGCAACTCGGCAGACCCCCTGGCATGTC
GGACCTCGCCGCGCTCGACGCCCGGGCGTTTCGCGGCTTCATGGCGAGCC
GGCGTCAATCGGGTGCATCGAGCCGGACGCTTGCGCGGACGATGTCGGCA
CTGCGGACGTTCTTCCGCTGGCTCGAGAACGACGAGATCATCAGGAACCG
GGCGATCCTCGCCGTGGCGCTGCCGAAAATCGGGCACAGCGTGCCCAAGC
CGCTCACCGTCGACAAGGCGCGCGCCGTCGTGGATGGCGGCATGGCTGCC
GAGATCGACTGGGTCAGCGCACGCGATGTGGCGGTGCTGCTGCTGCTCTA
CGGCTCCGGCCTGCGCATCTCCGAAGCGGTCGGGCTCAAGGTCAAGGACG
CACCAACCGCCGAGCGCGACGTGTTGCGGATCACCGGCAAGGGCGGCAAG
GAGCGCGCCGTCCCGGTTCTGCCGGTTGCCATCGCCGCCATCGACCGCTA
TCGCGCGCTCGTCCCCTACATGCTGGAGCGGGACGGCCGGTTGTTCCTGG
GAGCCAAGGGCGGGCCGCTCTCGCCGCGCCTCATTCAGCTCGCCATGGAG
CGCCTGCGCGCAGAGCTTTCGTTGCCCGATACCGCGACGCCGCATGCGCT
GCGGCATTCGTTCGCCACGCATCTGCTGTCGACGGGCGCCGACCTGCGGC
AGATCCAGGAACTGCTAGGGCATGCTTCGCTGTCGACGACGCAGATCTAC
ACTGAAGTCGATCGCGACCGGCTGCTCGCCGTGTACGATGCCAGCCATCC
CAGGTCGGCCACGCGCGAAGGCATGGCCAAGGCCTGA
back to top