mRNA_P-wetherbeei_contig11298.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11298.1.1
Unique NamemRNA_P-wetherbeei_contig11298.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig11298.1.1 vs. uniprot
Match: D8LPS2_ECTSI (Bleomycin hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPS2_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 2.540e-23
Identity = 48/79 (60.76%), Postives = 59/79 (74.68%), Query Frame = 3 
Query:  204 WCGVDMDRDNHTELSVIDPGMYRYDLVFGTTLGMTKEERPLYGESRMTHAMVLTGYNRREGEDWPNKWRVENSWGTKNG 440
            W GVD+ +  H EL ++D GMY +DLV+G + GMTKEER   GES M+HAMV TGY++R+GE  PNKWRVENSWG   G
Sbjct:  331 WMGVDVFKSYHLELGILDSGMYDHDLVYGVSPGMTKEERLRSGESLMSHAMVFTGYDKRDGEKIPNKWRVENSWGDTRG 409
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BLAST of mRNA_P-wetherbeei_contig11298.1.1 vs. uniprot
Match: A0A7Y0L4T7_9FIRM (Aminopeptidase n=1 Tax=Sulfobacillus sp. DSM 109850 TaxID=2729629 RepID=A0A7Y0L4T7_9FIRM)

HSP 1 Score: 90.1 bits (222), Expect = 2.040e-17
Identity = 42/80 (52.50%), Postives = 53/80 (66.25%), Query Frame = 3 
Query:  201 VWCGVDMDRDNHTELSVIDPGMYRYDLVFGTTLGMTKEERPLYGESRMTHAMVLTGYNRREGEDWPNKWRVENSWGTKNG 440
            VW G D+ + +  E  ++D   Y YD   G TLG+TK ER +YGES MTHAMVLTG N  +G+  PN+W+VENSWG   G
Sbjct:  308 VWFGCDVGKMSDRESGILDVDQYAYDAALGVTLGLTKAERLMYGESLMTHAMVLTGVNVADGQ--PNRWKVENSWGPDAG 385
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BLAST of mRNA_P-wetherbeei_contig11298.1.1 vs. uniprot
Match: F2URJ7_SALR5 (Bleomycin hydrolase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2URJ7_SALR5)

HSP 1 Score: 89.0 bits (219), Expect = 5.450e-17
Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 3 
Query:  201 VWCGVDMDRDNHTELSVIDPGMYRYDLVFGTTLGMTKEERPLYGESRMTHAMVLTGYNRREGEDWPNKWRVENSWGTKNG 440
            VW GVD+ ++ H +++V+D  ++ YDLVFGT   ++K +R  YG+S MTHAMV TGYN  +G+   +KWRVENSWG   G
Sbjct:  317 VWFGVDVGKEYHRKMAVMDTRLFDYDLVFGTRPALSKADRLRYGQSLMTHAMVFTGYNEADGKI--DKWRVENSWGKDVG 394
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BLAST of mRNA_P-wetherbeei_contig11298.1.1 vs. uniprot
Match: UPI0009A3447A (bleomycin hydrolase n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3447A)

HSP 1 Score: 85.9 bits (211), Expect = 2.220e-16
Identity = 45/103 (43.69%), Postives = 68/103 (66.02%), Query Frame = 3 
Query:  138 LHQPADGVAQGACSGCHRCCAVWCGVDMDRDNHTELSVIDPGMYRYDLVFGTTLG-MTKEERPLYGESRMTHAMVLTGYNRREGEDWP-NKWRVENSWGTKNG 440
            ++QP + + Q A +      AVW G D+++D  ++L + DP M+  +L+FG +LG   K ER ++GES+MTHAMVLTG++ + G +    KWRVENSWG  +G
Sbjct:  198 INQPIEVLKQSAAASIKDGEAVWFGSDVEKDFCSKLGINDPKMFNRELLFGVSLGNFGKAERLMFGESQMTHAMVLTGFSEKVGNEAGFEKWRVENSWGEDSG 300
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BLAST of mRNA_P-wetherbeei_contig11298.1.1 vs. uniprot
Match: A0A8J1YBH7_OWEFU (Bleomycin hydrolase n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1YBH7_OWEFU)

HSP 1 Score: 86.7 bits (213), Expect = 3.780e-16
Identity = 49/102 (48.04%), Postives = 64/102 (62.75%), Query Frame = 3 
Query:  138 LHQPADGVAQGACSGCHRCCAVWCGVDMDRDNHTELSVIDPGMYRYDLVFGTT-LGMTKEERPLYGESRMTHAMVLTGYNRREGEDWPNKWRVENSWGTKNG 440
            ++QP D + + A        AVW G D+ +  + +L   D  MY YDLVFGTT LG+ K +R +YGES MTHAM+LTG +  E E   +KWRVENSWG  +G
Sbjct:  308 VNQPVDVLKKCAAESIKNDEAVWFGTDVGKCFNGKLGFNDTEMYDYDLVFGTTVLGLNKSDRLIYGESLMTHAMLLTGVSINEDET-TSKWRVENSWGEDHG 408
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BLAST of mRNA_P-wetherbeei_contig11298.1.1 vs. uniprot
Match: A0A3M1JP14_9BACT (Aminopeptidase n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A3M1JP14_9BACT)

HSP 1 Score: 86.3 bits (212), Expect = 4.750e-16
Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = 3 
Query:  201 VWCGVDMDRDNHTELSVIDPGMYRYDLVFGTTLGMTKEERPLYGESRMTHAMVLTGYNRREGEDWPNKWRVENSWGTKNG 440
            VW G D+ +  H +L V+D  +Y YDL +G  +GM K  R  YG+S MTHAM+ TG + ++G   P KWRVENSWG K G
Sbjct:  311 VWFGCDVGKHFHRDLGVMDMDLYDYDLFYGVPIGMDKSTRLEYGDSMMTHAMLFTGVDLKDGR--PRKWRVENSWGEKVG 388
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BLAST of mRNA_P-wetherbeei_contig11298.1.1 vs. uniprot
Match: A0A067C9L2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C9L2_SAPPC)

HSP 1 Score: 86.3 bits (212), Expect = 4.850e-16
Identity = 41/81 (50.62%), Postives = 54/81 (66.67%), Query Frame = 3 
Query:  201 VWCGVDMDRDNHTE-LSVIDPGMYRYDLVFGTTLGMTKEERPLYGESRMTHAMVLTGYNRREGEDWPNKWRVENSWGTKNG 440
            VW G D+ + +  + L ++   +Y +DL FGTTLG  K  R  + ES MTHAMV TGYN +  E+ P+KWRVENSWGT+ G
Sbjct:  314 VWFGCDVGKASSLKKLGIMSTKLYDFDLAFGTTLGQDKAGRLRHKESEMTHAMVFTGYNVKPDEEKPDKWRVENSWGTERG 394
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BLAST of mRNA_P-wetherbeei_contig11298.1.1 vs. uniprot
Match: H3C8X2_TETNG (Bleomycin hydrolase n=2 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3C8X2_TETNG)

HSP 1 Score: 81.3 bits (199), Expect = 5.800e-16
Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 3 
Query:  198 AVWCGVDMDRDNHTELSVIDPGMYRYDLVFGTTL-GMTKEERPLYGESRMTHAMVLTGYNRREGEDWPNKWRVENSWGTKNG 440
            AVW G ++D+  H +L + D  ++ ++LVFG ++  +TK ER +YG+S MTHAM+LT    + G++   KWRVENSWG   G
Sbjct:   58 AVWFGCNVDKHFHGKLGINDMNVFNHELVFGISVKNLTKAERLIYGDSLMTHAMILTAVTDKNGKEGFEKWRVENSWGDDRG 139
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BLAST of mRNA_P-wetherbeei_contig11298.1.1 vs. uniprot
Match: A0A381WCB2_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381WCB2_9ZZZZ)

HSP 1 Score: 85.1 bits (209), Expect = 1.240e-15
Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 3 
Query:  201 VWCGVDMDRDNHTELSVIDPGMYRYDLVFGTTLGMTKEERPLYGESRMTHAMVLTGYNRREGEDWPNKWRVENSWGTKNG 440
            VW G D+ +  H  L V+D  ++ Y+L +GT  G+ K  R  YG+S+MTHAM++TG +    +  P KWRVENSWG KNG
Sbjct:  316 VWFGCDVSKHFHRTLGVMDMNLFNYELFYGTDFGLDKASRLEYGDSQMTHAMLITGVD-LNSKGQPTKWRVENSWGNKNG 394
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BLAST of mRNA_P-wetherbeei_contig11298.1.1 vs. uniprot
Match: A0A401SQU5_CHIPU (Bleomycin hydrolase n=2 Tax=Chiloscyllium TaxID=34767 RepID=A0A401SQU5_CHIPU)

HSP 1 Score: 85.1 bits (209), Expect = 1.280e-15
Identity = 45/103 (43.69%), Postives = 69/103 (66.99%), Query Frame = 3 
Query:  138 LHQPADGVAQGACSGCHRCCAVWCGVDMDRDNHTELSVIDPGMYRYDLVFGTTLG-MTKEERPLYGESRMTHAMVLTGYNRR-EGEDWPNKWRVENSWGTKNG 440
            ++QP + + + A +      AVW G D+ +D  ++L + DP ++  +LVFG +LG + K ER ++GES+MTHAMVLTG++ + E E    KWRVENSWG ++G
Sbjct:  304 INQPIEVLKESAAASIKDGEAVWFGCDVGKDFCSKLGINDPKIFNRELVFGVSLGNLGKAERLMFGESQMTHAMVLTGFSEKVESEAEFEKWRVENSWGEESG 406
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11298.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPS2_ECTSI2.540e-2360.76Bleomycin hydrolase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A7Y0L4T7_9FIRM2.040e-1752.50Aminopeptidase n=1 Tax=Sulfobacillus sp. DSM 10985... [more]
F2URJ7_SALR55.450e-1751.25Bleomycin hydrolase n=1 Tax=Salpingoeca rosetta (s... [more]
UPI0009A3447A2.220e-1643.69bleomycin hydrolase n=1 Tax=Rhincodon typus TaxID=... [more]
A0A8J1YBH7_OWEFU3.780e-1648.04Bleomycin hydrolase n=1 Tax=Owenia fusiformis TaxI... [more]
A0A3M1JP14_9BACT4.750e-1650.00Aminopeptidase n=1 Tax=Candidatus Marinimicrobia b... [more]
A0A067C9L2_SAPPC4.850e-1650.62Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
H3C8X2_TETNG5.800e-1645.12Bleomycin hydrolase n=2 Tax=Tetraodon nigroviridis... [more]
A0A381WCB2_9ZZZZ1.240e-1547.50Uncharacterized protein n=1 Tax=marine metagenome ... [more]
A0A401SQU5_CHIPU1.280e-1543.69Bleomycin hydrolase n=2 Tax=Chiloscyllium TaxID=34... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11298contigP-wetherbeei_contig11298:431..2128 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LPS2
Preferred nameBLMH
PFAMsPeptidase_C1_2
Model size662
Max annot lvl2759|Eukaryota
KEGG koko:K01372
Hectar predicted targeting categoryother localisation
GOsGO:0000096,GO:0000098,GO:0000122,GO:0000209,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003723,GO:0003729,GO:0003824,GO:0004175,GO:0004177,GO:0004180,GO:0004197,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008238,GO:0009056,GO:0009063,GO:0009636,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016054,GO:0016567,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032446,GO:0036211,GO:0042221,GO:0042493,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043418,GO:0043436,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046395,GO:0046677,GO:0048519,GO:0048523,GO:0050667,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0070011,GO:0070647,GO:0071704,GO:0080090,GO:0097159,GO:0140096,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141
Exons4
Evalue2.35e-22
EggNOG OGsCOG3579@1|root,KOG4128@2759|Eukaryota
EC3.4.22.40
Descriptionhomocysteine catabolic process
Cds size357
COG categoryE
BRITEko00000,ko01000,ko01002
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11298.1.1prot_P-wetherbeei_contig11298.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11298 930..2041 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185905.751394-UTR-P-wetherbeei_contig11298:430..5311683185905.751394-UTR-P-wetherbeei_contig11298:430..531Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11298 431..531 +
1683185905.7616427-UTR-P-wetherbeei_contig11298:812..9291683185905.7616427-UTR-P-wetherbeei_contig11298:812..929Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11298 813..929 +
1683185905.806057-UTR-P-wetherbeei_contig11298:2041..21281683185905.806057-UTR-P-wetherbeei_contig11298:2041..2128Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11298 2042..2128 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185905.77027-CDS-P-wetherbeei_contig11298:929..9471683185905.77027-CDS-P-wetherbeei_contig11298:929..947Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11298 930..947 +
1683185905.7791371-CDS-P-wetherbeei_contig11298:1357..14711683185905.7791371-CDS-P-wetherbeei_contig11298:1357..1471Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11298 1358..1471 +
1683185905.7971513-CDS-P-wetherbeei_contig11298:1816..20411683185905.7971513-CDS-P-wetherbeei_contig11298:1816..2041Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11298 1817..2041 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11298.1.1

>prot_P-wetherbeei_contig11298.1.1 ID=prot_P-wetherbeei_contig11298.1.1|Name=mRNA_P-wetherbeei_contig11298.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=119bp
MDRDNHTELSVIDPGMYRYDLVFGTTLGMTKEERPLYGESRMTHAMVLTG
YNRREGEDWPNKWRVENSWGTKNGAVRLSSVAMVAAAAAAAAAGAAAAAI
TVGRSHRTFSFACRADRF*
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mRNA from alignment at P-wetherbeei_contig11298:431..2128+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11298.1.1 ID=mRNA_P-wetherbeei_contig11298.1.1|Name=mRNA_P-wetherbeei_contig11298.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1698bp|location=Sequence derived from alignment at P-wetherbeei_contig11298:431..2128+ (Phaeothamnion wetherbeei SAG_119_79)
CCGCAAATGTTCTACGCAGAGCACGTGCCGTTCCGGGCGCAGAACCATGT
CTCGCTGATCCATGACCCGCGGCGGGAGCACCCGTACAAGCGCAGCTACC
CGTCAGGCGAATGGTAGGTGGTCGATCGCTTTTCGGTTTAGTCGGTCGTA
TGCTCTGTGGTGCAGTGGGTGTGCGTTGCATTCACTGACAAATTAGCTTA
GACATCTTCACTGCTTTCCTGGCACTTCTTGCGTTGATCTACTCTATAAC
CATTCTACATCCTGTAACTCTCTACTTTGGTCAAACTTGCCACTGTCCCT
GCCATGCGCCTTCACCGCCACCGCCACCTTTCCTGCCGTCATTCTGTGTC
TTCACCGCCCCTTCCTCTCCTTTCTCCATCAGCTTCCAGGGGAACATGGT
CAGTGCGCCGCAGGTGCGCTACATCAACCAGCCGATGGAGTCGCTCAAGG
CGCATGCAGTGGCTGCCATCGATGCTGCGCCGTGTGGTGCGGCGTCGACA
TGGACCGCGATAACCACGTGAGAGAGAGTTAGAGCGAAGGGGCGGATGGA
ATAATGGGAAGGAACAGGAGGTGACGGTAATAGTTGTTTTGGCGGCGGTT
GCACTGGAGCGCGGGGATGGAGGCAGGGTGCGATGTTAGCAGCGGCGGCG
GCGGATTTTGGCGAGGAGAGCGCCGGCGCTGGCCGCTCTGGCAGACGGAT
GGGTTGTTGGTGCTGACGGGGATTTTGCCAGACGAGATGTGGGAGAAGCC
GTCGTGACGTGTTCTTGCCCTCTCGTCGTGGGCTTTTCTCGCTGCTTTCT
CCACCTTTGATTCTCCCGCCTTCTCTTCGTTGCCACTGCCGCCGCCCTTT
AACCACGTTTTGTCCCATCCTTCTTCGGGAAAACCTGTAAACCCGAAAAT
CGAAAAACCGGGCCGAAAACCAAGCAGACTGAGCTAAGCGTGATCGACCC
GGGAATGTACCGGTACGACCTCGTTTTCGGAACGACCCTCGGCATGACCA
AGGAGGAGCGGCCCCTCTATGGCGAGAGCAGAATGACCCACGTGAGGCTG
AATGAGTGAAGAGGGAGACGCAGATTTCTAAGGCCGTCGTTTCCGCTCTT
CCCCTTCTTGAGACAGTGTACTCTTTTTTGTTTCTGTTTGCTGGATAGAA
GAGTCGCTTAATCCATCCTAAACGTTTGACGCGTTTCTGATTGCGCAAAA
AGAGATGGCCAATGGCCAATCTTTCCGGTTTGCATTTATGGTCACACGCA
GGCGCTTCCACGCGTTTTTCGTAGCTGTTTGACATTTGTTCTCTGCCAAT
CACCCGCGTCGCCTGATATTTCATCTTTCGCCGGCCTTTTTGTAAAGCAA
CATTTATTCTCCTTCTCGGGAATTCCTGTATTTCAGGCGATGGTGCTGAC
AGGCTACAACCGGCGAGAGGGCGAGGATTGGCCCAACAAGTGGCGCGTTG
AGAACTCGTGGGGCACCAAGAACGGTGCGGTGCGTCTATCTTCAGTGGCG
ATGGTGGCGGCGGCAGCGGCTGCTGCGGCGGCGGGGGCAGCAGCGGCAGC
AATAACCGTTGGCCGCAGCCACCGTACCTTCTCTTTCGCCTGCCGCGCGG
ACAGATTCTAGAAAAGTACGATGAAAAACAGAAAGCACAGACTGCCTGGG
TTCTGACCGAGGGAGCGAAGTGGCACGCCGCCGCTTCCGATATCTCTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11298:431..2128+

>mRNA_P-wetherbeei_contig11298.1.1 ID=mRNA_P-wetherbeei_contig11298.1.1|Name=mRNA_P-wetherbeei_contig11298.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig11298:431..2128+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACCGCGATAACCACACTGAGCTAAGCGTGATCGACCCGGGAATGTA
CCGGTACGACCTCGTTTTCGGAACGACCCTCGGCATGACCAAGGAGGAGC
GGCCCCTCTATGGCGAGAGCAGAATGACCCACGCGATGGTGCTGACAGGC
TACAACCGGCGAGAGGGCGAGGATTGGCCCAACAAGTGGCGCGTTGAGAA
CTCGTGGGGCACCAAGAACGGTGCGGTGCGTCTATCTTCAGTGGCGATGG
TGGCGGCGGCAGCGGCTGCTGCGGCGGCGGGGGCAGCAGCGGCAGCAATA
ACCGTTGGCCGCAGCCACCGTACCTTCTCTTTCGCCTGCCGCGCGGACAG
ATTCTAG
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