mRNA_P-wetherbeei_contig11212.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11212.3.1
Unique NamemRNA_P-wetherbeei_contig11212.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11212.3.1 vs. uniprot
Match: A0A3G5AB13_9VIRU (Uncharacterized protein n=1 Tax=Hyperionvirus sp. TaxID=2487770 RepID=A0A3G5AB13_9VIRU)

HSP 1 Score: 82.8 bits (203), Expect = 2.640e-15
Identity = 49/183 (26.78%), Postives = 90/183 (49.18%), Query Frame = 1
Query:   13 IIEAALFMCSIGLPRESLVSVHVFL------NDIPKMHHVQGLSTINVNSGSTPDAQTIVVFRKEEVIKVIMHEFCHLLALEPRSNDTLMADSLGTVMRVEGVFRPTEAITELIARVLYSCYVARTRSFSLDVVLQAQFQHAMQNAAKILSFYGIRRTSDLDSSTIVQSTCALEYHVLTAALM 543
            I+    FM  +G    S  + H+ +         P    V+ LS+ N+NSG++   + I+++R+EE+ KV++HE  H   ++       M+        V  V +P E+ TE +A + +S +V+   +  ++ +LQ +        AKIL ++ I  T+ L S  I+Q+T    Y ++  AL+
Sbjct:  194 IVHIIQFMNELGERNGSTKNPHIIIFAGLQRKQFPFDTEVKLLSSDNINSGASVMGEYIMIWREEEIYKVLIHELIHFHRIDAGDGYAGMSKYFMEKYNVRYVDKPNESYTEALAVIFHSAFVSYYNNIPMETILQYELMFTFLQIAKILLYFDITETNQLGSKQIIQTTSVFSYFIIKGALL 376          
BLAST of mRNA_P-wetherbeei_contig11212.3.1 vs. uniprot
Match: A0A2E3BYU8_9PROT (Uncharacterized protein n=1 Tax=Magnetococcales bacterium TaxID=2026759 RepID=A0A2E3BYU8_9PROT)

HSP 1 Score: 77.8 bits (190), Expect = 1.380e-13
Identity = 52/186 (27.96%), Postives = 94/186 (50.54%), Query Frame = 1
Query:    1 LANGIIEAALFMCSIGLPRESLVSVHVFLNDIPKMHHVQG--LSTINVNSGSTPDAQTIVVFRKEEVIKVIMHEFCHLLALE---PRSNDTLMADSLGTVMRVEGVFRPTEAITELIARVLYSCYVARTRSFSLDVVLQAQFQHAMQNAAKILSFYGIRRTSDLDSSTIVQSTCALEYHVLTAALM 543
            L N I    LFM  +G  +  + ++++ L  + K  ++    LS  NVNSGS     +I ++RKEE++KV++HE  H   L+      N  L+   L  +  +EG   P E  T+ +A +L+S +++   + S + +L  +   +    AKI++ +       +   TI Q +  L Y++L A+L+
Sbjct:  132 LVNQIFTILLFMKELGKGK-IIKNLNIILTPLKKKIYLLNGFLSQYNVNSGSCYPRHSIEIWRKEEILKVLIHELVHYYELDFNPSYPNYNLLITYLNQMFNIEGKINPFEGYTDTLAILLHSHFISEITNISFEKILLYEINWSCFQCAKIINIFKGDSYQSMFDITIKQKSNILSYYILKASLL 316          
BLAST of mRNA_P-wetherbeei_contig11212.3.1 vs. uniprot
Match: A0A3G4ZMI2_9VIRU (Uncharacterized protein n=1 Tax=Terrestrivirus sp. TaxID=2487775 RepID=A0A3G4ZMI2_9VIRU)

HSP 1 Score: 71.2 bits (173), Expect = 3.340e-11
Identity = 47/154 (30.52%), Postives = 77/154 (50.00%), Query Frame = 1
Query:   97 PKMHHVQG-LSTINVNSGSTPDAQTIVVFRKEEVIKVIMHEFCHLLALEPRSNDTLMADSLGTVM---RVEGVFRPTEAITELIARVLYSCYVARTRSFSLDVVLQAQFQHAMQNAAKILSFYGIRRTSDLDSSTIVQSTCALEYHVLTAALMY 546
            P+ ++ +G L   N+NSGS+     ++++RKEEV KV+ HE  H    +  S++   A+    VM    V  V  P E+ TE IA +++S +V+     S   V + +    +   +KILSFY I    +L    I Q+T    Y  +   L++
Sbjct:  262 PENNYDEGILCPSNINSGSSIMGINVMIWRKEEVHKVLFHELIHFFGFDFHSHNHGYAELRKYVMDTYNVRVVDSPNESYTECIATIIHSLFVSFYTHKSFSDVFRYELLFTLYQVSKILSFYKISTIDELGYKIITQTTSVFSYFFIKGLLLF 415          
BLAST of mRNA_P-wetherbeei_contig11212.3.1 vs. uniprot
Match: A0A6C0M2Z9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0M2Z9_9ZZZZ)

HSP 1 Score: 65.9 bits (159), Expect = 1.800e-9
Identity = 53/169 (31.36%), Postives = 80/169 (47.34%), Query Frame = 1
Query:   55 RESLVSVHVFLNDIPKMH-HVQG--LSTINVNSGST---PDAQTIVVFRKEEVIKVIMHEFCHLLALEPRSNDTLMADSLGTVMRVEGVFRPTEAITELIARVLYSCYVARTRSFSLDVVLQAQFQHAMQNAAKILSFYGIRRTSDLDSSTIVQSTCALEYHVLTAALM 543
            + S + V +FL    K+  +++G  L    VNSG T   P    I +FRKEEV+KV++HE  H   LE R      ADS+   + +   F   EA  EL A   ++ Y A  +    +  L  + +++     KI+ +Y I   SD    + VQ +    Y+VL   LM
Sbjct:  116 QSSDIEVWIFLCPHKKLFPNIRGKPLGRNEVNSGVTMLSPRESWIQIFRKEEVLKVLIHELLHYYELEIRDE----ADSIQKELGIN--FLLNEAYNELFAIYCHTLYYANYKKLDFNECLNKEIKYSENMFNKIIKYYKINNWSDFFKDSYVQYSNVFSYYVLKYLLM 278          
BLAST of mRNA_P-wetherbeei_contig11212.3.1 vs. uniprot
Match: A0A6C0H0P6_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0H0P6_9ZZZZ)

HSP 1 Score: 63.9 bits (154), Expect = 8.490e-9
Identity = 42/167 (25.15%), Postives = 80/167 (47.90%), Query Frame = 1
Query:   58 ESLVSVHVFLNDIPKMHHVQGLSTINVNSG---STPDAQTIVVFRKEEVIKVIMHEFCHLLALEPRSNDTLMADSLGTV-MRVEGVFRPTEAITELIARVLYSCYVARTRSFSLDVVLQAQFQHAMQNAAKILSFYGIRRTSDLDSSTIVQSTCALEYHVLTAALMY 546
            +++ S+++ L +  +    + +   NVN G    + D   I VFRKEEVIKV++HE CH   L+ +  D    +    + ++        E  TE IA + ++  ++   + S  ++   +   ++   AKIL  Y   +  DL +  ++Q T    Y++L   ++Y
Sbjct:  114 KNINSINIILLEQKREITTKIIGASNVNGGYIIGSNDKSDIFVFRKEEVIKVLIHELCHFYKLDCQKIDRYQNNIFKKINIKTPDYLSLNEVFTEYIAILHHTAIISFYINISPLLIYHYEKIWSLYQVAKILKHYNFNKFEDLYTKELIQETNVFSYYILKFFILY 280          
BLAST of mRNA_P-wetherbeei_contig11212.3.1 vs. uniprot
Match: A0A6C0HYR7_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HYR7_9ZZZZ)

HSP 1 Score: 62.0 bits (149), Expect = 3.600e-8
Identity = 39/138 (28.26%), Postives = 71/138 (51.45%), Query Frame = 1
Query:  133 NVNSGSTPDAQTIVVFRKEEVIKVIMHEFCHLLALEPRSNDTLMADSLGTVMRVEGVFRPTEAITELIARVLYSCYVARTRSFSLDVVLQAQFQHAMQNAAKILSFYGIRRTSDLDSSTIVQSTCALEYHVLTAALMY 546
            NVN+G + D   +VV+RKEE  KV++HEF H L  E    +  +   + ++ +V+      E+  E+ AR L  C ++      ++ +L  + ++++++   +L   G+      + S   + T  L Y VLTA LM+
Sbjct:  104 NVNTGYSSDK--VVVYRKEEWFKVLIHEFFHFLHHEHVLFEPSLQKRILSIFKVDSEVNLYESYCEVWARTLNCCILSSCNHVPVETLLYHEKKYSLRHMVNVLHHMGLTYPQLFEPSDYREDTNVLAYIVLTAILMH 239          
BLAST of mRNA_P-wetherbeei_contig11212.3.1 vs. uniprot
Match: A0A6C0BEZ3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BEZ3_9ZZZZ)

HSP 1 Score: 58.9 bits (141), Expect = 4.960e-7
Identity = 50/189 (26.46%), Postives = 90/189 (47.62%), Query Frame = 1
Query:   31 FMCSIGLPRESLVSVHVFLNDIPKMHHVQG--LSTINVNSGSTPDAQTIVVFRKEEVIKVIMHEFCHLLALEPRSNDTLMADSLGTVMRVEGVFRPTEAITELIA----RVLYSC---------YVARTRSFSLDVVLQAQFQHAMQNAAKILSF----YGIRRTSDLDSSTIVQSTCALEYHVLTAAL 540
            F C I  P    +S+HVFL D  K    +   L+  NVN+G T + +TI+V+RKEEVIKV++HE  H   ++           L  +  ++     TE+ T+ +A     +LYS          + +  RSF+ +  L+ +  + ++ A+++L      YG++           + T  + Y+++ A +
Sbjct:  103 FKCDIPRP----LSIHVFLTDYKKEFPSESTLLTPFNVNTGVTINGKTILVYRKEEVIKVLIHELIHFFGIDHMHVSQDKEHELQHLFSLQNRVYLTESYTDFLACTSNTMLYSVLSSTGKLLSFKSFIRSFNSN--LKRERLYILEQASRVLHHQNYCYGVKHNYS-------EKTHVIAYYIIKAVM 278          
BLAST of mRNA_P-wetherbeei_contig11212.3.1 vs. uniprot
Match: A0A6C0AHK4_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AHK4_9ZZZZ)

HSP 1 Score: 55.5 bits (132), Expect = 6.800e-6
Identity = 43/163 (26.38%), Postives = 77/163 (47.24%), Query Frame = 1
Query:   49 LPRESLVSVHVFLNDIPKMH---HVQGLSTINVNSGSTPDAQTIVVFRKEEVIKVIMHEFCHLLALEPRSNDTLMADSLGTVMRVEGVFRPTEAITELIARVLYSCYVARTRSFSLDVVLQAQFQHAMQNAAKILSFYGIRRTSDLDSSTIVQSTCALEYHVL 528
            LP    +   + L+ + K +   HV G +  +VN+G   D + IVV+RKEE +KV +HE  H    E    + +    +  +  V+      EA  E+ AR L    ++   S  + ++L+ + +++M++   +L   G+   S    S+  + T  L Y VL
Sbjct:   73 LPCNKPLRADILLSPVKKEYPEDHVFGQA--HVNTGYASD-EKIVVYRKEEWLKVFIHECFHYFHFEQSLMNPIFVPRILKLFPVQSKVNVYEAYCEVWARALNCYLISAYTSIPVSILLRQEKKYSMRHMVNVLHHMGLTYASIQKPSSFREKTNVLSYVVL 232          
BLAST of mRNA_P-wetherbeei_contig11212.3.1 vs. uniprot
Match: A0A5J6VJL8_9VIRU (Uncharacterized protein n=1 Tax=Megaviridae environmental sample TaxID=1737588 RepID=A0A5J6VJL8_9VIRU)

HSP 1 Score: 55.5 bits (132), Expect = 7.790e-6
Identity = 35/154 (22.73%), Postives = 77/154 (50.00%), Query Frame = 1
Query:   91 DIPKMHHVQGL-STINVNSG-STPDAQTIVVFRKEEVIKVIMHEFCHLLALEPRSNDTLMADSLGTVMRVEGVFRPTEAITELIARVLYSCYVARTRSFSLDVVLQAQFQHAMQNAAKILSFYGIRRTSDLDSSTIVQSTCALEYHVLTAALMY 546
            D PK+++   + ST+ +NSG S P   +IV++RKEE++KV++HE  H L ++ + + + M D +   +  E  + P E+  + +  ++     +       + V + +    +  A+++L +      +D+      Q      Y++  AA+++
Sbjct:  110 DTPKIYNGGNMGSTLIINSGMSNPYTNSIVIWRKEEMLKVLIHEMIHALDMDLKKSPSFMMDIVN--LHPESYYHPNESACDTLTILILCVLNSIVNKVLPEDVFKLEVNWCLLQASRVLWWNKCVCFNDIKRKQFRQDCDMFSYYITKAAILF 261          
BLAST of mRNA_P-wetherbeei_contig11212.3.1 vs. uniprot
Match: A0A1V0SE12_9VIRU (Uncharacterized protein n=1 Tax=Indivirus ILV1 TaxID=1977633 RepID=A0A1V0SE12_9VIRU)

HSP 1 Score: 53.1 bits (126), Expect = 4.830e-5
Identity = 39/148 (26.35%), Postives = 66/148 (44.59%), Query Frame = 1
Query:  121 LSTINVNSGSTPDAQT----IVVFRKEEVIKVIMHEFCHLLALEPRSNDTLMADSLGTVMRVEGVFRPTEAITELIARVLYSCYVARTRSFSLDVVLQAQFQHAMQNAAKILSFYGIRRTSDL---DSSTIVQSTCALEYHVLTAALM 543
            L+  NVNS  +    T    I ++RKEE+IKV++HE  H   +E           +  +  V G    TEA+ E +A  +     +   + +++ ++  +    +   AKIL  +      D     +  I+Q T A EYH+L   L+
Sbjct:  126 LTENNVNSADSTFFSTGDINIRIYRKEELIKVLIHETIHCTKVEKA------VIPINNIYNVNGKLLLTEAVVEALATYINCMIYSELFNKNINDLIINEINFGILQTAKILDHFNFTSIIDFLENKNKKIIQKTAAFEYHILKTILL 267          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11212.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A3G5AB13_9VIRU2.640e-1526.78Uncharacterized protein n=1 Tax=Hyperionvirus sp. ... [more]
A0A2E3BYU8_9PROT1.380e-1327.96Uncharacterized protein n=1 Tax=Magnetococcales ba... [more]
A0A3G4ZMI2_9VIRU3.340e-1130.52Uncharacterized protein n=1 Tax=Terrestrivirus sp.... [more]
A0A6C0M2Z9_9ZZZZ1.800e-931.36Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0H0P6_9ZZZZ8.490e-925.15Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0HYR7_9ZZZZ3.600e-828.26Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0BEZ3_9ZZZZ4.960e-726.46Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0AHK4_9ZZZZ6.800e-626.38Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A5J6VJL8_9VIRU7.790e-622.73Uncharacterized protein n=1 Tax=Megaviridae enviro... [more]
A0A1V0SE12_9VIRU4.830e-526.35Uncharacterized protein n=1 Tax=Indivirus ILV1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11212contigP-wetherbeei_contig11212:1474..2019 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size546
Hectar predicted targeting categoryother localisation
Exons1
Cds size546
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185902.475851-CDS-P-wetherbeei_contig11212:1473..20191683185902.475851-CDS-P-wetherbeei_contig11212:1473..2019Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11212 1474..2019 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11212.3.1prot_P-wetherbeei_contig11212.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11212 1474..2019 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11212.3.1

>prot_P-wetherbeei_contig11212.3.1 ID=prot_P-wetherbeei_contig11212.3.1|Name=mRNA_P-wetherbeei_contig11212.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=182bp
LANGIIEAALFMCSIGLPRESLVSVHVFLNDIPKMHHVQGLSTINVNSGS
TPDAQTIVVFRKEEVIKVIMHEFCHLLALEPRSNDTLMADSLGTVMRVEG
VFRPTEAITELIARVLYSCYVARTRSFSLDVVLQAQFQHAMQNAAKILSF
YGIRRTSDLDSSTIVQSTCALEYHVLTAALMY
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mRNA from alignment at P-wetherbeei_contig11212:1474..2019+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11212.3.1 ID=mRNA_P-wetherbeei_contig11212.3.1|Name=mRNA_P-wetherbeei_contig11212.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=546bp|location=Sequence derived from alignment at P-wetherbeei_contig11212:1474..2019+ (Phaeothamnion wetherbeei SAG_119_79)
CTTGCCAATGGAATCATCGAAGCTGCACTGTTCATGTGCTCCATTGGCCT TCCGAGGGAATCATTGGTCTCAGTGCACGTATTCCTCAATGACATTCCAA AGATGCACCATGTGCAAGGACTCTCCACAATAAATGTAAACTCCGGTTCT ACTCCAGACGCACAGACAATTGTTGTCTTCCGTAAAGAGGAAGTCATCAA AGTGATAATGCACGAGTTTTGCCATTTGCTTGCGCTGGAACCAAGGTCGA ACGATACACTCATGGCTGACTCTCTCGGCACAGTTATGCGCGTAGAGGGT GTGTTTCGCCCTACGGAGGCCATCACCGAGCTCATTGCACGCGTGCTCTA CAGCTGTTACGTGGCAAGGACGCGCAGCTTCTCATTGGATGTGGTCCTGC AAGCTCAATTTCAACATGCAATGCAGAACGCTGCCAAAATCCTGAGTTTC TATGGAATTCGTCGCACAAGTGACTTGGACAGTTCAACAATAGTACAGTC TACGTGTGCTTTGGAATATCACGTCCTCACTGCGGCGCTCATGTAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11212:1474..2019+

>mRNA_P-wetherbeei_contig11212.3.1 ID=mRNA_P-wetherbeei_contig11212.3.1|Name=mRNA_P-wetherbeei_contig11212.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=546bp|location=Sequence derived from alignment at P-wetherbeei_contig11212:1474..2019+ (Phaeothamnion wetherbeei SAG_119_79)
CTTGCCAATGGAATCATCGAAGCTGCACTGTTCATGTGCTCCATTGGCCT
TCCGAGGGAATCATTGGTCTCAGTGCACGTATTCCTCAATGACATTCCAA
AGATGCACCATGTGCAAGGACTCTCCACAATAAATGTAAACTCCGGTTCT
ACTCCAGACGCACAGACAATTGTTGTCTTCCGTAAAGAGGAAGTCATCAA
AGTGATAATGCACGAGTTTTGCCATTTGCTTGCGCTGGAACCAAGGTCGA
ACGATACACTCATGGCTGACTCTCTCGGCACAGTTATGCGCGTAGAGGGT
GTGTTTCGCCCTACGGAGGCCATCACCGAGCTCATTGCACGCGTGCTCTA
CAGCTGTTACGTGGCAAGGACGCGCAGCTTCTCATTGGATGTGGTCCTGC
AAGCTCAATTTCAACATGCAATGCAGAACGCTGCCAAAATCCTGAGTTTC
TATGGAATTCGTCGCACAAGTGACTTGGACAGTTCAACAATAGTACAGTC
TACGTGTGCTTTGGAATATCACGTCCTCACTGCGGCGCTCATGTAT
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