prot_P-wetherbeei_contig10068.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10068.1.1
Unique Nameprot_P-wetherbeei_contig10068.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length428
Homology
BLAST of mRNA_P-wetherbeei_contig10068.1.1 vs. uniprot
Match: UPI00083C4A4D (general transcription factor 3C polypeptide 5 n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C4A4D)

HSP 1 Score: 72.8 bits (177), Expect = 3.850e-10
Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 0
Query:  108 MQHMFQRRPVWSKSELIRETREWGQHTMNDCEHI---VAYKATNGPWRQFWIRYGYTPHADPQARFLQALDVRVTSA 181
            ++ +F+ RP+WS+  L+ +T      T+   +HI   VAY   NGPWR  WIR+GY P  DP A+  Q LD+R+ S+
Sbjct:  255 LKELFEERPIWSRQALLYDT----GFTVEQLKHILPKVAYYYLNGPWRVMWIRFGYNPKKDPNAKIYQTLDIRIRSS 327          
BLAST of mRNA_P-wetherbeei_contig10068.1.1 vs. uniprot
Match: A0A8J2RZJ6_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2RZJ6_9CRUS)

HSP 1 Score: 72.4 bits (176), Expect = 5.190e-10
Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 0
Query:  108 MQHMFQRRPVWSKSELIRETREWGQHTMNDCEHIVAYKATNGPWRQFWIRYGYTPHADPQARFLQALDVRVTSAILNE 185
            ++ MF+ RPVW+K+ LI       ++++      VAY  TNGPWR  W+R GY P  DP+AR  Q LD R++    N+
Sbjct:  275 IKKMFEERPVWTKAALIYNVAGVDKNSLRFILASVAYYFTNGPWRNAWVRIGYDPRKDPEARIYQILDYRISQNYRNK 352          
BLAST of mRNA_P-wetherbeei_contig10068.1.1 vs. uniprot
Match: A0A5J4N6Y1_9TREM (General transcription factor 3C polypeptide 5 (Transcription factor C subunit 1) (Fragment) n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4N6Y1_9TREM)

HSP 1 Score: 68.6 bits (166), Expect = 6.460e-9
Identity = 28/77 (36.36%), Postives = 44/77 (57.14%), Query Frame = 0
Query:  108 MQHMFQRRPVWSKSELIRETREWGQHTMNDCEHIV-AYKATNGPWRQFWIRYGYTPHADPQARFLQALDVRVTSAIL 183
            ++ +F  RPVW ++ L+       + T+  C  +  AY    GPW + W+RYGY P  DP+AR+ Q +D R+ S +L
Sbjct:  242 LEELFNSRPVWVRNALVHHLGTESRQTIFKCGILAFAYYFVRGPWGRTWVRYGYDPRTDPEARYFQVIDFRIKSHVL 318          
BLAST of mRNA_P-wetherbeei_contig10068.1.1 vs. uniprot
Match: E9FVE5_DAPPU (Uncharacterized protein n=3 Tax=Daphnia TaxID=6668 RepID=E9FVE5_DAPPU)

HSP 1 Score: 68.6 bits (166), Expect = 8.570e-9
Identity = 30/75 (40.00%), Postives = 43/75 (57.33%), Query Frame = 0
Query:  111 MFQRRPVWSKSELIRETREWGQHTMNDCEHIVAYKATNGPWRQFWIRYGYTPHADPQARFLQALDVRVTSAILNE 185
            MF+ RPVW+K+ L  +     ++++      VAY  T GPWR  W+R GY P  DP+AR  Q LD R++    N+
Sbjct:  254 MFEERPVWTKAALTYQVAGVDKNSLRFILASVAYYFTTGPWRNAWVRIGYDPRKDPEARIYQILDFRISQNYRNK 328          
BLAST of mRNA_P-wetherbeei_contig10068.1.1 vs. uniprot
Match: A0A0L0HHZ6_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HHZ6_SPIPD)

HSP 1 Score: 67.4 bits (163), Expect = 2.130e-8
Identity = 31/70 (44.29%), Postives = 41/70 (58.57%), Query Frame = 0
Query:  108 MQHMFQRRPVWSKSELIRETREWGQHTMNDCEHIVAYKATNGPWRQFWIRYGYTPHADPQARFLQALDVR 177
            M+ +FQ RP+W++  L        ++ M     I AY AT+GPWR  WIRYGY P  D +AR  Q +DVR
Sbjct:  259 MRALFQERPIWTRLALHNSMPPAYRNLMKRLMPIHAYVATSGPWRDCWIRYGYDPRRDREARLYQIIDVR 328          
BLAST of mRNA_P-wetherbeei_contig10068.1.1 vs. uniprot
Match: A0A397SYC3_9GLOM (RNA polymerase III transcription factor IIIC subunit-domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397SYC3_9GLOM)

HSP 1 Score: 66.6 bits (161), Expect = 3.590e-8
Identity = 29/72 (40.28%), Postives = 41/72 (56.94%), Query Frame = 0
Query:  108 MQHMFQRRPVWSKSELIRETREWGQHTMNDCEHIVAYKATNGPWRQFWIRYGYTPHADPQARFLQALDVRVT 179
            M  +F+ RP+W++  L        +  +     +VAY  +NGPWR  WIRYGY P  + +ARF Q LD+R T
Sbjct:  240 MNKLFEDRPIWTRLALENNLPSNDKRNIKRLLPLVAYLMSNGPWRDCWIRYGYDPRLNQEARFYQLLDIRNT 311          
BLAST of mRNA_P-wetherbeei_contig10068.1.1 vs. uniprot
Match: A0A162T0L4_9CRUS (Lethal (2) 37Cd n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A162T0L4_9CRUS)

HSP 1 Score: 66.2 bits (160), Expect = 5.170e-8
Identity = 29/78 (37.18%), Postives = 43/78 (55.13%), Query Frame = 0
Query:  108 MQHMFQRRPVWSKSELIRETREWGQHTMNDCEHIVAYKATNGPWRQFWIRYGYTPHADPQARFLQALDVRVTSAILNE 185
            ++ MF+ RPVW+K+ L        ++++       AY  T GPWR  W+R GY P  DP+AR  Q LD R++    N+
Sbjct:  307 IRKMFEERPVWTKAALTYHVAGVDKNSLRFILASAAYYFTTGPWRNAWVRIGYDPRQDPEARIHQILDFRISQNFRNK 384          
BLAST of mRNA_P-wetherbeei_contig10068.1.1 vs. uniprot
Match: A0A482V8K9_9CUCU (General transcription factor 3C polypeptide 5 n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482V8K9_9CUCU)

HSP 1 Score: 65.9 bits (159), Expect = 7.410e-8
Identity = 28/71 (39.44%), Postives = 43/71 (60.56%), Query Frame = 0
Query:  108 MQHMFQRRPVWSKSELIRETREWGQHTMNDCEHIVAYKATNGPWRQFWIRYGYTPHADPQARFLQALDVRV 178
            ++ +F+ RP+W+K+ +   T    +H+      +VAY   NGPWR  W+++GY P  DPQAR  Q LD R+
Sbjct:  319 VKQLFEERPIWTKAAIRYNTGLTDEHSKVILP-VVAYYFINGPWRISWVKFGYDPRRDPQARIYQTLDYRI 388          
BLAST of mRNA_P-wetherbeei_contig10068.1.1 vs. uniprot
Match: A0A482WL55_LAOST (Uncharacterized protein n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482WL55_LAOST)

HSP 1 Score: 65.1 bits (157), Expect = 1.080e-7
Identity = 33/95 (34.74%), Postives = 54/95 (56.84%), Query Frame = 0
Query:   97 PLLRRYMCVRFM--------QHMFQRRPVWSKSELIRETREWGQHTMNDCEHI---VAYKATNGPWRQFWIRYGYTPHADPQARFLQALDVRVTS 180
            P   +Y+ ++F+        +  F+RRP+WSK+ LI ET+    ++++  +++   VAY    GP+R  W+R GY P  DP +R  Q LD R+ S
Sbjct:  220 PSALKYLELKFLAMDHYEKIKQCFERRPIWSKTALIYETK----YSIDKIKYLLPSVAYHFVTGPFRVMWVRIGYDPRKDPSSRIYQTLDYRIPS 310          
BLAST of mRNA_P-wetherbeei_contig10068.1.1 vs. uniprot
Match: A0A5E4QXI0_9NEOP (Uncharacterized protein n=1 Tax=Leptidea sinapis TaxID=189913 RepID=A0A5E4QXI0_9NEOP)

HSP 1 Score: 64.3 bits (155), Expect = 1.800e-7
Identity = 28/77 (36.36%), Postives = 43/77 (55.84%), Query Frame = 0
Query:  108 MQHMFQRRPVWSKSELIRETREWGQHTMNDCEHIVAYKATNGPWRQFWIRYGYTPHADPQARFLQALDVRVTSAILN 184
            ++ MF+ RP+WS S L++      + ++      +AY    GPWR  W+RYGY P  +P AR  Q LD R+   +L+
Sbjct:  248 VKKMFEDRPIWSSS-LVKHLTNIKEPSLRMIFPCLAYYLKTGPWRLLWVRYGYDPRKEPNARIYQTLDFRLRHTVLS 323          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10068.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00083C4A4D3.850e-1041.56general transcription factor 3C polypeptide 5 n=1 ... [more]
A0A8J2RZJ6_9CRUS5.190e-1041.03Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
A0A5J4N6Y1_9TREM6.460e-936.36General transcription factor 3C polypeptide 5 (Tra... [more]
E9FVE5_DAPPU8.570e-940.00Uncharacterized protein n=3 Tax=Daphnia TaxID=6668... [more]
A0A0L0HHZ6_SPIPD2.130e-844.29Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A397SYC3_9GLOM3.590e-840.28RNA polymerase III transcription factor IIIC subun... [more]
A0A162T0L4_9CRUS5.170e-837.18Lethal (2) 37Cd n=2 Tax=Daphnia magna TaxID=35525 ... [more]
A0A482V8K9_9CUCU7.410e-839.44General transcription factor 3C polypeptide 5 n=1 ... [more]
A0A482WL55_LAOST1.080e-734.74Uncharacterized protein n=1 Tax=Laodelphax striate... [more]
A0A5E4QXI0_9NEOP1.800e-736.36Uncharacterized protein n=1 Tax=Leptidea sinapis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019136Transcription factor IIIC subunit 5, HTH domainPFAMPF09734Tau95coord: 102..177
e-value: 3.0E-20
score: 73.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..428
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..240
NoneNo IPR availablePANTHERPTHR13230:SF5GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 5coord: 104..316
IPR040454Transcription factor IIIC subunit Tfc1/Sfc1PANTHERPTHR13230GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5coord: 104..316

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10068contigP-wetherbeei_contig10068:431..2188 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10068.1.1mRNA_P-wetherbeei_contig10068.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10068 431..2188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10068.1.1 ID=prot_P-wetherbeei_contig10068.1.1|Name=mRNA_P-wetherbeei_contig10068.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=428bp
MTTGSFGAPAPTAPKAVQKILADMAKANIPRIGGVGVGGGSSDDGGEEGD
GSNEEGSVDGDADSGDAACGKAGGDDGDDLAAAEAALLAGIHASTDPLLR
RYMCVRFMQHMFQRRPVWSKSELIRETREWGQHTMNDCEHIVAYKATNGP
WRQFWIRYGYTPHADPQARFLQALDVRVTSAILNEWYRLFGLPPPPLPKK
KSPGAADDCDDDGANEDGDDGGADDGAGDDGGAGGGCGVGGGREVEDEAV
GVGMRRRGSILWAFQRPIARQMRIPMRCLAPRALQMTVLRAPRVDKPSQT
HGWFSAETVKQLRGAVIRHVQDQAEAYARTHHADAAGAGAGVVSTLLAPA
RSIAGGGVGGPAAAAGDAPLSEEEFMRLAAEMGPKATIILAAALPIPRHG
KGQAGGPNPSAASAASAANPAAGAGTGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019136TF_IIIC_su-5_HTH
IPR040454TF_IIIC_Tfc1/Sfc1