mRNA_P-wetherbeei_contig21442.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21442.1.1 vs. uniprot
Match: A0A835YYK4_9STRA (CBF/Mak21 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYK4_9STRA) HSP 1 Score: 142 bits (359), Expect = 4.210e-35 Identity = 78/168 (46.43%), Postives = 108/168 (64.29%), Query Frame = 1
Query: 1 KMEELLSLV-ADHDAVVQQLAALSALAIFRDIIPAYRLRLPTEKERSQKVSKQVQQVRSYEAALLSNYQVRLRRKKITVSGFASXXXXXXXXXXDAGRRAAGLCAVRCMCGVLEAHPHFNFRSNLVAAVVPRLSHADPEARRACYECLERLFAADAQGETSLEVRKLV 501
++E+L +L D D +VQQLA LS A+F+DIIPAYR+R+ ++KE+ +VSK VQ+VR +E LLS YQ L+ + V + RA + AV CMCG+L HPHFNFR+NL+ A+VPR+ HA PE +ACY+C+ +F D QGE +LEV + V
Sbjct: 435 RLEQLHALAYEDEDLLVQQLAMLSEYAVFKDIIPAYRIRMLSDKEKDVRVSKDVQRVRDHERGLLSAYQTFLKYLESVVRSATTGEHAGGSKIA----RAVAVNAVHCMCGLLTTHPHFNFRANLILAIVPRMDHAWPEVSQACYDCVVNVFKTDQQGEVALEVTRAV 598
BLAST of mRNA_P-wetherbeei_contig21442.1.1 vs. uniprot
Match: D7G845_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G845_ECTSI) HSP 1 Score: 137 bits (346), Expect = 2.280e-33 Identity = 80/167 (47.90%), Postives = 101/167 (60.48%), Query Frame = 1
Query: 1 KMEELLSLVADHDAVVQQLAALSALAIFRDIIPAYRLRLPTEKERSQKVSKQVQQVRSYEAALLSNYQVRLRRKKITVSGFASXXXXXXXXXXDAGRRAAGLCAVRCMCGVLEAHPHFNFRSNLVAAVVPRLSHADPEARRACYECLERLFAADAQGETSLEVRKLV 501
++E+L +LV D D V LA LS A+F+DIIP YR+R+PT E + KVSK+V +VR+ EAALL YQ L+ + V S + RA A+RCMCG+L AHPHFNFRSNLV VV +H E R AC +CL +F D QGE SLE+ K V
Sbjct: 347 RIEQLFALVEDDDHRVCHLALLSQYAVFKDIIPGYRIRVPTAAEMATKVSKEVHRVRAQEAALLRAYQGYLKALEAAVQAAVSPKGGGAST---SAARALASAAIRCMCGLLSAHPHFNFRSNLVRTVVAGTNHKLAEVREACCKCLGGVFEQDTQGEVSLEIAKAV 510
BLAST of mRNA_P-wetherbeei_contig21442.1.1 vs. uniprot
Match: A0A250X9R6_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X9R6_9CHLO) HSP 1 Score: 119 bits (298), Expect = 5.850e-27 Identity = 76/177 (42.94%), Postives = 107/177 (60.45%), Query Frame = 1
Query: 1 KMEELLSLVADHDAVVQQLAALSALAIFRDIIPAYRLRLPTEKERSQKVSKQVQQVRSYEAALLSNYQVRLRRKKITVS-------GFASXXXXXXXXXXDAGRRAA---GLCAVRCMCGVLEAHPHFNFRSNLVAAVVPRLSHADPEARRACYECLERLFAADAQGETSLEVRKLV 501
+++ LL+L + D+ V +LA LS LA+FRDIIP YR+R PT++E KVSK+VQ++R YEAALL +YQ L KI VS G AS AG A+ A++CMC +L + PHFN+ S+L+ AVVPR++ D E R C +++L D +G +LE +LV
Sbjct: 309 ELKILLALANNQDSQVSRLALLSLLAVFRDIIPGYRIRPPTDQELQVKVSKEVQKLRDYEAALLRSYQTYL---KILVSALNKDAGGSASKHGAKKSGPGAAGSSASKNHARIAIKCMCQLLSSIPHFNYTSDLLQAVVPRMTARDQEIRVLCCSAVKQLLTGDVEGGVALEAVQLV 482
BLAST of mRNA_P-wetherbeei_contig21442.1.1 vs. uniprot
Match: UPI00053F9D4E (nucleolar complex protein 3 homolog n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F9D4E) HSP 1 Score: 119 bits (297), Expect = 7.540e-27 Identity = 73/180 (40.56%), Postives = 102/180 (56.67%), Query Frame = 1
Query: 4 MEELLSLVADHDAVVQQLAALSALAIFRDIIPAYRLRLPTEKERSQKVSKQVQQVRSYEAALLSNYQVRLRRKKITVSGFASXXXXXXXXXXDAGRRAAGLCAVRCMCGVLEAHPHFNFRSNLVAAVVPRLSHADPEARRACYECLERLFAADAQ--GETSLEVRKLVDGKDAYIPCSLH 537
++ELLSL D D +++ A LS+L +FRDIIP YR+RLPTEKE+ VSK V++ R +EA LLS+Y+ L+R IT+ VRC C +L+AHPHFNF NL++AVV LS D R+ C ++ LF +A+ GE ++E +L+ C LH
Sbjct: 212 LKELLSLCKDGDKSIEKAALLSSLVVFRDIIPGYRIRLPTEKEQEMNVSKGVKKTRYFEATLLSSYKAYLQRL-ITLQRLPEFNRV----------------VVRCFCTLLDAHPHFNFSDNLISAVVRNLSSGDDVVRKHCSTTIQSLFKNEAKHGGEATVEAVQLIANLVKIYDCQLH 374
BLAST of mRNA_P-wetherbeei_contig21442.1.1 vs. uniprot
Match: A0A8B7D0E8_PHODC (nucleolar complex protein 3 homolog n=5 Tax=Arecaceae TaxID=4710 RepID=A0A8B7D0E8_PHODC) HSP 1 Score: 115 bits (289), Expect = 8.770e-26 Identity = 72/180 (40.00%), Postives = 102/180 (56.67%), Query Frame = 1
Query: 4 MEELLSLVADHDAVVQQLAALSALAIFRDIIPAYRLRLPTEKERSQKVSKQVQQVRSYEAALLSNYQVRLRRKKITVSGFASXXXXXXXXXXDAGRRAAGLCAVRCMCGVLEAHPHFNFRSNLVAAVVPRLSHADPEARRACYECLERLFAADAQ--GETSLEVRKLVDGKDAYIPCSLH 537
++ELL + D D + +L +S LA+F+DIIP YR+RLPTEKE VSK VQQ RSYE+ LL +Y+ L+ K IT+ + AVRCMC +L+A PHFNFR +L+A VV +S +D R+ C E + LF + + G+ +LE +L+ + C LH
Sbjct: 215 LKELLQICDDDDHNIVKLGLMSLLAVFKDIIPGYRIRLPTEKELEMTVSKAVQQTRSYESTLLHSYKAYLQ-KLITLDKQPTFHHV----------------AVRCMCSLLDAVPHFNFRESLLANVVKNISSSDDVVRKLCCEAITSLFINEGKHGGQATLEAVRLIAAHVKFHDCQLH 377
BLAST of mRNA_P-wetherbeei_contig21442.1.1 vs. uniprot
Match: A0A835XN08_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XN08_9CHLO) HSP 1 Score: 115 bits (289), Expect = 9.410e-26 Identity = 68/157 (43.31%), Postives = 93/157 (59.24%), Query Frame = 1
Query: 1 KMEELLSLVADHDAVVQQLAALSALAIFRDIIPAYRLRLPTEKERSQKVSKQVQQVRSYEAALLSNYQVRLRRKKITVSGFASXXXXXXXXXXDAGRRAAGLCAVRCMCGVLEAHPHFNFRSNLVAAVVPRLSHADPEARRACYECLERLFAADAQG 471
++ L +LV D D++V +LA LS LA+F+DI+P YR+R PTEKE KVSK+V ++R +E ALL YQ LR S G + AVRC+ G+L AHPHFN+ S+++ AVVPR++ DPE R E + L AA A+G
Sbjct: 291 ELRTLQALVTDGDSMVSRLAMLSLLAVFKDILPGYRIRPPTEKELEVKVSKEVAKLRDHEQALLKAYQTYLR----------SLLDAANCVRAGTGTLSHSRVAVRCLSGLLAAHPHFNYTSDILQAVVPRMAAHDPETRSMACEAVRALLAAGAEG 437
BLAST of mRNA_P-wetherbeei_contig21442.1.1 vs. uniprot
Match: UPI0009E3052E (nucleolar complex protein 3 homolog isoform X1 n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E3052E) HSP 1 Score: 113 bits (283), Expect = 5.810e-25 Identity = 72/180 (40.00%), Postives = 101/180 (56.11%), Query Frame = 1
Query: 4 MEELLSLVADHDAVVQQLAALSALAIFRDIIPAYRLRLPTEKERSQKVSKQVQQVRSYEAALLSNYQVRLRRKKITVSGFASXXXXXXXXXXDAGRRAAGLCAVRCMCGVLEAHPHFNFRSNLVAAVVPRLSHADPEARRACYECLERLFAADAQ--GETSLEVRKLVDGKDAYIPCSLH 537
+++LL + +D D + +L +S +A+F+DIIP YR+RLPTEKE KVSK V Q R YE+ LLS+Y+ L+ K I S AVRCMC +L+A PHFNFR NLVA VV +S AD R+ C E ++ +F + + G+ +LE +L+ C LH
Sbjct: 212 LKDLLHICSDEDHNIVKLGLMSVVAVFKDIIPGYRIRLPTEKELEMKVSKDVLQTRFYESTLLSSYKAYLQ-KLIAFEKDPSFHRL----------------AVRCMCILLDAVPHFNFRENLVAVVVRNISSADNVVRKLCCETIKSVFTNEGKHGGQVTLEAVRLISDLVKAHDCQLH 374
BLAST of mRNA_P-wetherbeei_contig21442.1.1 vs. uniprot
Match: A0A200QBN0_9MAGN (CCAAT-binding factor n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QBN0_9MAGN) HSP 1 Score: 113 bits (282), Expect = 7.430e-25 Identity = 69/180 (38.33%), Postives = 104/180 (57.78%), Query Frame = 1
Query: 4 MEELLSLVADHDAVVQQLAALSALAIFRDIIPAYRLRLPTEKERSQKVSKQVQQVRSYEAALLSNYQVRLRRKKITVSGFASXXXXXXXXXXDAGRRAAGLCAVRCMCGVLEAHPHFNFRSNLVAAVVPRLSHADPEARRACYECLERLFAADAQ--GETSLEVRKLVDGKDAYIPCSLH 537
++++L + D D + +L LS LA+F+DIIP YR+RLPTEKE VSK ++++R YE+ L+S+Y+V L+R I + +S AVRCMC +L+A PHFNFR NL+AAV+ +S D R+ C ++ LFA++ + GE ++E L+ C LH
Sbjct: 199 LKDILQISKDEDQSIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMTVSKAIRKMRFYESTLMSSYKVYLQRL-IALEKQSSFQHV----------------AVRCMCSLLDAVPHFNFRENLLAAVINNMSSPDDVTRKLCCTTVKSLFASEGKHGGEATVEAVHLIANLVKLHDCHLH 361
BLAST of mRNA_P-wetherbeei_contig21442.1.1 vs. uniprot
Match: A0A6A1VVD7_9ROSI (Uncharacterized protein n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1VVD7_9ROSI) HSP 1 Score: 113 bits (282), Expect = 7.480e-25 Identity = 69/180 (38.33%), Postives = 101/180 (56.11%), Query Frame = 1
Query: 4 MEELLSLVADHDAVVQQLAALSALAIFRDIIPAYRLRLPTEKERSQKVSKQVQQVRSYEAALLSNYQVRLRRKKITVSGFASXXXXXXXXXXDAGRRAAGLCAVRCMCGVLEAHPHFNFRSNLVAAVVPRLSHADPEARRACYECLERLFAADAQ--GETSLEVRKLVDGKDAYIPCSLH 537
++E+L + D+D + +L LS LA+F+DIIP YR+RLPTEKE KVSK V++ R YE+ LLS Y+ L+ K I + S A+RCMC +L+A PHFNFR +L+ AVV + +D R+ C ++ LF + + GE ++E +L+ G C LH
Sbjct: 218 LKEMLQISKDNDHAIVKLGVLSLLAVFKDIIPGYRIRLPTEKELEMKVSKAVKKTRFYESTLLSTYKAYLQ-KLIVLENKPSFQHV----------------AIRCMCSLLDAVPHFNFRGSLLVAVVRNIGSSDDVVRKLCCATIKSLFTNEGKHGGEATVEAVRLIAGLVKAQNCQLH 380
BLAST of mRNA_P-wetherbeei_contig21442.1.1 vs. uniprot
Match: A0A2C9UJL1_MANES (Uncharacterized protein n=4 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9UJL1_MANES) HSP 1 Score: 112 bits (281), Expect = 1.030e-24 Identity = 72/180 (40.00%), Postives = 101/180 (56.11%), Query Frame = 1
Query: 4 MEELLSLVADHDAVVQQLAALSALAIFRDIIPAYRLRLPTEKERSQKVSKQVQQVRSYEAALLSNYQVRLRRKKITVSGFASXXXXXXXXXXDAGRRAAGLCAVRCMCGVLEAHPHFNFRSNLVAAVVPRLSHADPEARRACYECLERLFAADAQ--GETSLEVRKLVDGKDAYIPCSLH 537
++E+L D D + +LA LS LA+F+DIIP YR+RLPTEKE KVSK V+++R YE+ LLS Y+V L+ K+ V S AVRC+C +LEA PHFNFR NL+ AVV + +D RR C ++ LF + + G+ ++E +L+ C LH
Sbjct: 257 LKEMLQFCKDDDHAIVKLALLSLLAVFKDIIPGYRIRLPTEKELEMKVSKDVKKMRYYESTLLSAYKVYLQ--KLMVLEKQSMFQHV---------------AVRCICTLLEAAPHFNFRENLLGAVVENIGSSDDVIRRLCCATIKSLFTNEGKHGGQATVEAVRLIADLIKAHDCQLH 419 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21442.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21442.1.1 >prot_P-wetherbeei_contig21442.1.1 ID=prot_P-wetherbeei_contig21442.1.1|Name=mRNA_P-wetherbeei_contig21442.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=194bp MEELLSLVADHDAVVQQLAALSALAIFRDIIPAYRLRLPTEKERSQKVSKback to top mRNA from alignment at P-wetherbeei_contig21442:21..1066+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21442.1.1 ID=mRNA_P-wetherbeei_contig21442.1.1|Name=mRNA_P-wetherbeei_contig21442.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1046bp|location=Sequence derived from alignment at P-wetherbeei_contig21442:21..1066+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21442:21..1066+ >mRNA_P-wetherbeei_contig21442.1.1 ID=mRNA_P-wetherbeei_contig21442.1.1|Name=mRNA_P-wetherbeei_contig21442.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=582bp|location=Sequence derived from alignment at P-wetherbeei_contig21442:21..1066+ (Phaeothamnion wetherbeei SAG_119_79)back to top |