mRNA_P-wetherbeei_contig10840.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10840.1.1
Unique NamemRNA_P-wetherbeei_contig10840.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10840.1.1 vs. uniprot
Match: D7G0G7_ECTSI (Putative malate/L-lact (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0G7_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 1.830e-106
Identity = 170/252 (67.46%), Postives = 199/252 (78.97%), Query Frame = 1
Query:    1 MATNGSIKRKAEEISEDGSKVKVALPDLRVVAEKAVKKLGYDDAAAKVLVDIMEYSQLRGGNQGLIKIITHGIDKDAAAMEPTIEHETKLSARLNGNKTAGMLVVGKAVEMAIDKAKEHGFGMVGTHNTCTSTGSIGAYVRKIAEEGLIGIAFAQSPEFVAPHGAYEPVLGTNPIAVGVPRLDGHPPLVLDMATSAYPFFGLLEAKTAGRPIPGDVAYDAQGNLTTDPAAAIAGAIRGWG-GHKGGHLALMV 753
            M+ NG  KRKA+E++     V+V L +L+ VAEK V KLGY++   KV+ DI+ YSQLRGGNQGLIKIITHG DK    +   + HE+KLSARL+G KT GMLVV KAV MAI KAKEHGFGMVGT NT TSTGSIG Y R IA+ GLI   FAQSPEFVAP GAYE +LGTNPIAVG+PR +G  P+VLDMAT+AYPFFGLLEAKTAG+PIPGDVAYDA+GN TTDPA A+ GAIR +   +KGG+L+L+V
Sbjct:    1 MSGNGGEKRKADEMTAAADVVEVPLAELKDVAEKGVSKLGYNEEDTKVICDILMYSQLRGGNQGLIKIITHGADKAPDCVPAKVVHESKLSARLDGGKTHGMLVVSKAVNMAIAKAKEHGFGMVGTSNTSTSTGSIGYYARAIADAGLIAFCFAQSPEFVAPFGAYEALLGTNPIAVGIPREEGKEPIVLDMATAAYPFFGLLEAKTAGKPIPGDVAYDAEGNATTDPAEALKGAIRVFDRSYKGGNLSLIV 252          
BLAST of mRNA_P-wetherbeei_contig10840.1.1 vs. uniprot
Match: A0A0G4HWQ3_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HWQ3_9ALVE)

HSP 1 Score: 273 bits (697), Expect = 1.500e-87
Identity = 134/229 (58.52%), Postives = 176/229 (76.86%), Query Frame = 1
Query:   67 VALPDLRVVAEKAVKKLGYDDAAAKVLVDIMEYSQLRGGNQGLIKIITHGIDKDAAAMEPTIEHETKLSARLNGNKTAGMLVVGKAVEMAIDKAKEHGFGMVGTHNTCTSTGSIGAYVRKIAEEGLIGIAFAQSPEFVAPHGAYEPVLGTNPIAVGVPRLDGHPPLVLDMATSAYPFFGLLEAKTAGRPIPGDVAYDAQGNLTTDPAAAIAGAIRGWGGHKGGHLALMV 753
            + L DL+ +  KAVK++GYDDA  ++L D M  +Q+RG NQG+IKI T G+  D  A+ P I HE+KLSAR++G +TAGM+VVGKAV++A+ KAK+HG GMVGT NT TS+G +G Y ++ A++GL+ I FA SPEFV P GA + + GTNP+A G+PR DG PPL+LDMAT+A   FG+L+AKTAG+ +P  VA+D QGN T DPA A+AGAIR +GG+KG HLALMV
Sbjct:   11 IPLADLKSLCTKAVKRIGYDDADTEILTDCMLAAQIRGNNQGIIKIPTGGLTPDPKAVAPKIVHESKLSARMDGGQTAGMVVVGKAVDLAVSKAKDHGIGMVGTFNTSTSSGYLGYYAKRAADKGLVTIIFANSPEFVCPEGAVQAIFGTNPLAFGIPRGDGQPPLILDMATAAIALFGVLQAKTAGQELPEGVAFDPQGNETKDPAGALAGAIRTFGGYKGSHLALMV 239          
BLAST of mRNA_P-wetherbeei_contig10840.1.1 vs. uniprot
Match: C1EH63_MICCC (Malate dehydrogenase (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EH63_MICCC)

HSP 1 Score: 258 bits (659), Expect = 1.240e-82
Identity = 137/233 (58.80%), Postives = 174/233 (74.68%), Query Frame = 1
Query:   61 VKVALPDLRVVAEKAVKKLGYDDAAAKVLVDIMEYSQLRGGNQGLIKIITHGIDKDAAAMEPTIEHETKLSARLNGNKTAGMLVVGKAVEMAIDKAKEHGFGMVGTHNTCTSTGSIGAYVRKIAEEGLIGIAFAQSPEFVAPHGAYEPVLGTNPIAVGVPRLDGHPPLVLDMATSAYPFFGLLEAKTAGRPIPGDVAYDAQGNLTTDPAAAI-AGAIRGW-GGHKGGHLALMV 753
            V V + +L     +A+K  GYDD   ++L+D+M Y+QLRG NQG+IK+ T GI +D A     IEHET+LSA LNGNK AGM+V+ KA+++AI+KAK HGFG+ GT+NT TSTG++G Y +KIAEEGLI + FA SPEFVAP+GA +P+ GTNPI VG+P      P+VLDMATSAY FFGLLEA+TAG+ IP  VA D+ G +T DP AAI  GAI G+ GG+K  +LALMV
Sbjct:    1 VSVPITELTETCRRAIKTYGYDDVETQILLDVMMYAQLRGNNQGIIKVTTKGIARDPACTPIAIEHETQLSACLNGNKNAGMVVIHKAMDIAIEKAKTHGFGICGTNNTSTSTGALGYYAQKIAEEGLIAMVFAVSPEFVAPNGAIQPIFGTNPIGVGIPTAGK--PVVLDMATSAYSFFGLLEARTAGKKIPHGVAIDSAGKITEDPNAAIDGGAIVGFDGGYKSSNLALMV 231          
BLAST of mRNA_P-wetherbeei_contig10840.1.1 vs. uniprot
Match: A0A7J7PDE8_9CHLO (Malate/L-lactate dehydrogenase (Fragment) n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PDE8_9CHLO)

HSP 1 Score: 251 bits (642), Expect = 4.800e-80
Identity = 134/233 (57.51%), Postives = 176/233 (75.54%), Query Frame = 1
Query:   61 VKVALPDLRVVAEKAVKKLGYDDAAAKVLVDIMEYSQLRGGNQGLIKIITHGIDKDAAAMEPTIEHETKLSARLNGNKTAGMLVVGKAVEMAIDKAKEHGFGMVGTHNTCTSTGSIGAYVRKIAEEGLIGIAFAQSPEFVAPHGAYEPVLGTNPIAVGVPRLDGHPPLVLDMATSAYPFFGLLEAKTAGRPIPGDVAYDAQGNLTTDPAAAIAG-AIRGWG-GHKGGHLALMV 753
            V + + +LR +  K++  LGY +    VL+D++ Y+QLRG NQG+IKI T G+++ AAA    +E ET+LSA LNGN  AGMLV+ +A+ MA++KAK  GFG+VGT+NT TSTG++G Y  +IA++G IGI FAQSPEFVAPHGA + + GTNPIA+G+P   G  P+V+DMAT+AY +FGLLEAKTAGRPIPGDVA D+QG  TTDP   ++G AIR +   HKG +LALMV
Sbjct:    1 VYIPISELRELCTKSLCTLGYSNDETAVLLDVLLYAQLRGNNQGIIKITTGGMNRAAAAAPIAVERETRLSALLNGNAQAGMLVLHRAMTMAVEKAKSAGFGIVGTNNTSTSTGALGFYAEQIAKQGFIGIVFAQSPEFVAPHGAKQAIFGTNPIAIGIPAEQG--PVVMDMATAAYAWFGLLEAKTAGRPIPGDVALDSQGQPTTDPNEVLSGGAIRVFDRSHKGSNLALMV 231          
BLAST of mRNA_P-wetherbeei_contig10840.1.1 vs. uniprot
Match: A0A7S0N043_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N043_9CHLO)

HSP 1 Score: 263 bits (671), Expect = 5.830e-79
Identity = 134/232 (57.76%), Postives = 176/232 (75.86%), Query Frame = 1
Query:   61 VKVALPDLRVVAEKAVKKLGYDDAAAKVLVDIMEYSQLRGGNQGLIKIITHGIDKDAAAMEPTIEHETKLSARLNGNKTAGMLVVGKAVEMAIDKAKEHGFGMVGTHNTCTSTGSIGAYVRKIAEEGLIGIAFAQSPEFVAPHGAYEPVLGTNPIAVGVPRLDGHPPLVLDMATSAYPFFGLLEAKTAGRPIPGDVAYDAQGNLTTDPAAAIAGAIRGW-GGHKGGHLALMV 753
            V V +  L+ +  KA++   Y +  A VL+D+M Y+Q+RG NQG+IKI T GI K   A EP +  ETKLSA ++G + +GML + KA++MA++KA  HGFG+VGT+NT TSTG+IG Y +K+AE+GL+ I  AQSPEF+APHGA E + GTNPIA+GVPR +G P +V+DMAT AYP+FGLLEA+TAGR IP  VA+DA GN+TTDP+ A+ GAIR + GG+KG HLAL V
Sbjct:   88 VDVPVTYLKEIVRKAIRTFEYSEKDASVLLDVMMYAQMRGNNQGIIKITTGGIVKPPGAPEPVVTQETKLSALIDGQQNSGMLALTKAMDMAVEKAAAHGFGIVGTNNTPTSTGAIGYYAQKVAEKGLVAIVLAQSPEFMAPHGAKEAIFGTNPIAIGVPRAEGAP-MVMDMATCAYPYFGLLEARTAGRKIPPGVAHDADGNITTDPSEALQGAIRTFDGGYKGSHLALCV 318          
BLAST of mRNA_P-wetherbeei_contig10840.1.1 vs. uniprot
Match: C1MNU6_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MNU6_MICPC)

HSP 1 Score: 244 bits (622), Expect = 4.470e-76
Identity = 133/238 (55.88%), Postives = 167/238 (70.17%), Query Frame = 1
Query:   46 EDGSKVKVALPDLRVVAEKAVKKLGYDDAAAKVLVDIMEYSQLRGGNQGLIKIITHGIDKDAAAMEPTIEHETKLSARLNGNKTAGMLVVGKAVEMAIDKAKEHGFGMVGTHNTCTSTGSIGAYVRKIAEEGLIGIAFAQSPEFVAPHGAYEPVLGTNPIAVGVPRLDGHPPLVLDMATSAYPFFGLLEAKTAGRPIPGDVAYDAQGNLTTDPAAAI-AGAIRGW-GGHKGGHLALMV 753
            E    V V + +L     +A+K  GYDD   ++L+D+M Y+QLRG NQG+IK+ T GI +D +A   TI HETKLSA  +G K AGM+V+ +A+E AIDKAK HG G+ GT NT TSTG++G Y  K+A EGLI +  A SPEFVAP GA EP+ GTNPI VG+P   G  P+VLDMATSAY FFGLLEA+TAG+ IP  VA D  G+LT DP A I  GAI+ + GG+K  +LAL+V
Sbjct:   70 ESAPDVTVPIDELTETCRRAIKTYGYDDDETRILLDVMLYAQLRGNNQGIIKVTTKGIARDPSATPATITHETKLSAAYDGGKNAGMVVLHRAMENAIDKAKAHGVGVCGTCNTFTSTGALGYYAEKVANEGLIALVLAVSPEFVAPAGAIEPIFGTNPIGVGIPTATG--PVVLDMATSAYSFFGLLEARTAGKKIPLGVAIDGSGSLTEDPNAVIDGGAIKTFDGGYKSSNLALIV 305          
BLAST of mRNA_P-wetherbeei_contig10840.1.1 vs. uniprot
Match: A0A383VE78_TETOB (Uncharacterized protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VE78_TETOB)

HSP 1 Score: 254 bits (648), Expect = 1.440e-75
Identity = 134/237 (56.54%), Postives = 179/237 (75.53%), Query Frame = 1
Query:   49 DGSKVKVALPDLRVVAEKAVKKLGYDDAAAKVLVDIMEYSQLRGGNQGLIKIITHGIDKDAAAMEPTIEHETKLSARLNGNKTAGMLVVGKAVEMAIDKAKEHGFGMVGTHNTCTSTGSIGAYVRKIAEEGLIGIAFAQSPEFVAPHGAYEPVLGTNPIAVGVPRLDGHPPLVLDMATSAYPFFGLLEAKTAGRPIPGDVAYDAQGNLTTDPAAAIAG-AIRGWG-GHKGGHLALMV 753
            +G+ V + + +L+ +  K++  LGY      VL+D++ Y+QLRG NQG+IKI T G+++ AAA    +E ET+LSA LNGN  AGMLV+ +A+ MA++KAK  GFG+VGT+NT TSTG++G Y  ++A++GLIGI FAQSPEFVAPHGA + + GTNPIA+G+P   G  P+V+DMAT+AY +FGLLEAKTAGRPIPGDVA +AQG  TTDP   ++G AIR +   HKG +LALMV
Sbjct:   18 EGNTVYIPISELKELCTKSLSTLGYSTEETAVLLDVLLYAQLRGNNQGIIKITTGGMNRAAAAAPIAVERETRLSALLNGNAQAGMLVLHRAMTMAVEKAKSAGFGIVGTNNTSTSTGALGYYAEQVAKQGLIGIVFAQSPEFVAPHGAKQAIFGTNPIAIGIPAEKG--PVVMDMATAAYAWFGLLEAKTAGRPIPGDVALNAQGQPTTDPNEVLSGGAIRVFDRSHKGSNLALMV 252          
BLAST of mRNA_P-wetherbeei_contig10840.1.1 vs. uniprot
Match: A0A7S0X325_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X325_9CHLO)

HSP 1 Score: 249 bits (635), Expect = 6.740e-74
Identity = 130/235 (55.32%), Postives = 172/235 (73.19%), Query Frame = 1
Query:   55 SKVKVALPDLRVVAEKAVKKLGYDDAAAKVLVDIMEYSQLRGGNQGLIKIITHGIDKDAAAMEPTIEHETKLSARLNGNKTAGMLVVGKAVEMAIDKAKEHGFGMVGTHNTCTSTGSIGAYVRKIAEEGLIGIAFAQSPEFVAPHGAYEPVLGTNPIAVGVPRLDGHPPLVLDMATSAYPFFGLLEAKTAGRPIPGDVAYDAQGNLTTDPAAAI-AGAIRGW-GGHKGGHLALMV 753
            ++V V + +L     + +K  GYDDA  K+L+D+M Y+QLRG NQG+IK+ T  I +D  A   T E+ T LS   NGNK AGM+V+ KA+E A++KA++HGFG+ GT+NTCTSTG++G Y  K+A +GLI + FA SPEFVAP+GA EP+ GTNPI VG+P  +G  P+VLDMATSAY FFGLLEA+TAG+ IP  VA D  G++T DP AAI  GAI+ + GG+K  +LAL+V
Sbjct:   20 AEVSVPVAELTEATRRGIKTFGYDDAETKILLDVMMYAQLRGNNQGIIKVTTKAIARDPLAGAITAEYATMLSTCYNGNKNAGMVVLHKAMETAVEKARDHGFGICGTNNTCTSTGALGYYAEKVAAQGLIALVFAVSPEFVAPNGAMEPIFGTNPIGVGIPTENG--PVVLDMATSAYSFFGLLEARTAGKKIPHGVAIDGNGDITEDPNAAIEGGAIKTFDGGYKSSNLALVV 252          
BLAST of mRNA_P-wetherbeei_contig10840.1.1 vs. uniprot
Match: W7U3V9_9STRA (Ureidoglycolate dehydrogenase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3V9_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.670e-73
Identity = 120/235 (51.06%), Postives = 172/235 (73.19%), Query Frame = 1
Query:   61 VKVALPDLRVVAEKAVKK-LGYDDAAAKVLVDIMEYSQLRGGNQGLIKIITHGIDKDAAAMEPTIE--HETKLSARLNGNKTAGMLVVGKAVEMAIDKAKEHGFGMVGTHNTCTSTGSIGAYVRKIAEEGLIGIAFAQSPEFVAPHGAYEPVLGTNPIAVGVPRLDGHPPLVLDMATSAYPFFGLLEAKTAGRPIPGDVAYDAQGNLTTDPAAAIAGAIRGWG-GHKGGHLALMV 753
            V++ L +L  V ++ +++ L Y++  A ++  ++ Y+Q+RG +QG+IK++T G+    A+    IE  HETK+SARL+G+ TAGMLV+ +A  MAI KA+EHG  +V TH T + TG+IG Y R +A+ GL+GI  +QSPE +APHG+YEP+ GTNP A G+PR D   P+VLDMATSAY ++ L EA+ AG+PIP DVAYDA+G+ T DP+AA++GA+R +   HKG H+ALMV
Sbjct:    9 VEMDLSELEAVTQRLLQQSLNYNEEEAAIITRVLLYAQMRGNSQGVIKLVTGGVPASDASTHTDIEVEHETKVSARLHGHGTAGMLVLHRATSMAIQKAREHGLSIVATHGTSSGTGAIGFYARSVADNGLVGIILSQSPELMAPHGSYEPIFGTNPFAFGIPRDDTSIPIVLDMATSAYAWYALKEARAAGQPIPPDVAYDAEGHPTRDPSAALSGALRVFDRSHKGSHIALMV 243          
BLAST of mRNA_P-wetherbeei_contig10840.1.1 vs. uniprot
Match: A0A0G1U5V2_9BACT (Uncharacterized protein n=1 Tax=Candidatus Beckwithbacteria bacterium GW2011_GWB1_47_15 TaxID=1618371 RepID=A0A0G1U5V2_9BACT)

HSP 1 Score: 234 bits (598), Expect = 5.350e-73
Identity = 119/232 (51.29%), Postives = 171/232 (73.71%), Query Frame = 1
Query:   61 VKVALPDLRVVAEKAVKKLGYDDAAAKVLVDIMEYSQLRGGNQGLIKIITHGIDKDAAAMEPTIEHETKLSARLNGNKTAGMLVVGKAVEMAIDKAKEHGFGMVGTHNTCTSTGSIGAYVRKIAEEGLIGIAFAQSPEFVAPHGAYEPVLGTNPIAVGVPRLDGHPPLVLDMATSAYPFFGLLEAKTAGRPIPGDVAYDAQGNLTTDPAAAIAGAIRGWG-GHKGGHLALMV 753
            +KV +  L  + +KA++  GY ++  K++ +I+ Y+QLRG NQG++K+I  GI K++ A +  +  +TKLSAR++G +  GM+VV KAV++A+ KAK+HGFG+VGT NT +STG+IG Y  KIA++G+IG+ FA SP  V  HG+YEP+ GTNP+A+G+P      P+VLDMAT+A  +FGL++AKTAG+ IPGDVAYD++G LTTDP  AI GAI  +   +K   LAL+V
Sbjct:    1 MKVKISKLNQLVKKALRHYGYSESETKLIFEILMYAQLRGNNQGIVKLIGKGIPKNSKAGKIKVVKQTKLSARIDGKQNMGMVVVSKAVDLALQKAKQHGFGIVGTFNTASSTGAIGYYANKIAKKGMIGLVFAGSPPIVTTHGSYEPLFGTNPLAIGIPSTGQ--PIVLDMATAAMAYFGLVQAKTAGKKIPGDVAYDSKGKLTTDPGKAIDGAILPFDRSYKSAGLALVV 230          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10840.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0G7_ECTSI1.830e-10667.46Putative malate/L-lact (ISS) n=2 Tax=Ectocarpus Ta... [more]
A0A0G4HWQ3_9ALVE1.500e-8758.52Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
C1EH63_MICCC1.240e-8258.80Malate dehydrogenase (Fragment) n=1 Tax=Micromonas... [more]
A0A7J7PDE8_9CHLO4.800e-8057.51Malate/L-lactate dehydrogenase (Fragment) n=1 Tax=... [more]
A0A7S0N043_9CHLO5.830e-7957.76Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
C1MNU6_MICPC4.470e-7655.88Predicted protein (Fragment) n=1 Tax=Micromonas pu... [more]
A0A383VE78_TETOB1.440e-7556.54Uncharacterized protein n=2 Tax=Scenedesmaceae Tax... [more]
A0A7S0X325_9CHLO6.740e-7455.32Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
W7U3V9_9STRA1.670e-7351.06Ureidoglycolate dehydrogenase n=3 Tax=Monodopsidac... [more]
A0A0G1U5V2_9BACT5.350e-7351.29Uncharacterized protein n=1 Tax=Candidatus Beckwit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10840contigP-wetherbeei_contig10840:562..2023 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G0G7
PFAMsLdh_2
Model size753
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue3e-107
EggNOG OGsCOG2055@1|root,2QRW5@2759|Eukaryota
Descriptionoxidoreductase activity
Cds size753
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185886.9795275-CDS-P-wetherbeei_contig10840:561..7621683185886.9795275-CDS-P-wetherbeei_contig10840:561..762Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10840 562..762 +
1683185886.9902356-CDS-P-wetherbeei_contig10840:1125..12781683185886.9902356-CDS-P-wetherbeei_contig10840:1125..1278Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10840 1126..1278 +
1683185886.9991608-CDS-P-wetherbeei_contig10840:1411..14961683185886.9991608-CDS-P-wetherbeei_contig10840:1411..1496Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10840 1412..1496 +
1683185887.0071507-CDS-P-wetherbeei_contig10840:1709..20231683185887.0071507-CDS-P-wetherbeei_contig10840:1709..2023Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10840 1710..2023 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10840.1.1prot_P-wetherbeei_contig10840.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10840 562..2023 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10840.1.1

>prot_P-wetherbeei_contig10840.1.1 ID=prot_P-wetherbeei_contig10840.1.1|Name=mRNA_P-wetherbeei_contig10840.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp
MATNGSIKRKAEEISEDGSKVKVALPDLRVVAEKAVKKLGYDDAAAKVLV
DIMEYSQLRGGNQGLIKIITHGIDKDAAAMEPTIEHETKLSARLNGNKTA
GMLVVGKAVEMAIDKAKEHGFGMVGTHNTCTSTGSIGAYVRKIAEEGLIG
IAFAQSPEFVAPHGAYEPVLGTNPIAVGVPRLDGHPPLVLDMATSAYPFF
GLLEAKTAGRPIPGDVAYDAQGNLTTDPAAAIAGAIRGWGGHKGGHLALM
V
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mRNA from alignment at P-wetherbeei_contig10840:562..2023+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10840.1.1 ID=mRNA_P-wetherbeei_contig10840.1.1|Name=mRNA_P-wetherbeei_contig10840.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1462bp|location=Sequence derived from alignment at P-wetherbeei_contig10840:562..2023+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCACCAACGGAAGCATCAAGCGAAAGGCAGAAGAAATCAGCGAGGA CGGATCGAAGGTGAAGGTGGCGCTGCCGGACCTCCGCGTCGTCGCTGAGA AGGCCGTCAAGAAGCTGGGCTACGACGACGCTGCCGCAAAGGTGCTCGTC GACATTATGGAGTACAGCCAGCTGCGCGGGGGGAACCAGGGCCTGATAAA AGTAAGGACGAGCGAAAAGCTGTTGACGAAACTTGTTTTAGGGTTGCGCA GGTAGTTGGGGAGCTCCTGTTGAGGGCCCTATCTACCGCCCGGCCTATAA ACGGCTTGCCGCTGTTTCGGAGGAGCCATGGCGGCCGTCGCTTCTCACTC ACCTGACATACGCGGGCGCGTCCTGAGGTCGTTTCAGCCGTTGAAATTGA ATGGCTTGCGGTCTTCCGTGCACTGACGCAGTAACGGGCTGCTCCGGCCG CTGGAACGGCACGAGCGGCGTTGAGATAGCGAAGGGCGGCGGTGGCGCGC TTCTCAGGGTTGCCTCCGGGCCTTGAAGTTTTCTCACAGTGGTATATCTT CGACAAACATGCAGATTATCACTCATGGCATCGACAAGGACGCTGCGGCG ATGGAGCCGACGATCGAACACGAGACAAAGCTGTCGGCGCGGCTCAACGG CAACAAGACGGCGGGCATGTTGGTCGTCGGCAAGGCCGTGGAGATGGCCA TCGACAAGGCCAAGGAGGTGAGAAGCATGCACCCTTGTGGCGGGAGCGAT TTCTGGAACTCACGTGCGCTACCATCGCACCACAGCCGCAATCCACGCCA GGCATCTTCATCTTTGCTCATGCCTTTTCGCCTTCTCGGGTTGTCTGCAG CACGGCTTTGGCATGGTGGGGACGCACAACACGTGCACGAGCACGGGTTC CATCGGGGCGTACGTGCGCAAGATCGCCGAGGAAGGTGAGCAAACCGGAC CGGCGTTTTCGTGCTTCCGCTTGCTGCCGGCCCAATGAGAAACCCTTCTT GCACGTGCTGACAGACCGACTCATATCTCTTCTCTCGCTCTGTATCAACT GCGACTGGCCCCTCCCGCCTCCTCCCGCCCGGCTCTTCTCTTCGGCACAC GCTTGACGCCCTCGCCGGAAAACTGGCGTTCACATAACCTGACGACAGGC CTCATCGGTATCGCCTTCGCGCAGTCCCCCGAGTTCGTCGCCCCGCACGG TGCATACGAGCCCGTCCTCGGCACCAACCCCATCGCCGTCGGCGTGCCGC GCCTCGACGGACACCCGCCGCTCGTCCTGGACATGGCTACCTCGGCCTAC CCGTTCTTCGGCCTGCTCGAGGCCAAGACGGCAGGGCGGCCTATCCCGGG CGATGTGGCATACGACGCTCAGGGGAACCTGACGACGGACCCGGCGGCGG CCATCGCCGGCGCAATTCGCGGGTGGGGCGGGCACAAGGGCGGCCACCTG GCACTCATGGTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10840:562..2023+

>mRNA_P-wetherbeei_contig10840.1.1 ID=mRNA_P-wetherbeei_contig10840.1.1|Name=mRNA_P-wetherbeei_contig10840.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig10840:562..2023+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCACCAACGGAAGCATCAAGCGAAAGGCAGAAGAAATCAGCGAGGA
CGGATCGAAGGTGAAGGTGGCGCTGCCGGACCTCCGCGTCGTCGCTGAGA
AGGCCGTCAAGAAGCTGGGCTACGACGACGCTGCCGCAAAGGTGCTCGTC
GACATTATGGAGTACAGCCAGCTGCGCGGGGGGAACCAGGGCCTGATAAA
AATTATCACTCATGGCATCGACAAGGACGCTGCGGCGATGGAGCCGACGA
TCGAACACGAGACAAAGCTGTCGGCGCGGCTCAACGGCAACAAGACGGCG
GGCATGTTGGTCGTCGGCAAGGCCGTGGAGATGGCCATCGACAAGGCCAA
GGAGCACGGCTTTGGCATGGTGGGGACGCACAACACGTGCACGAGCACGG
GTTCCATCGGGGCGTACGTGCGCAAGATCGCCGAGGAAGGCCTCATCGGT
ATCGCCTTCGCGCAGTCCCCCGAGTTCGTCGCCCCGCACGGTGCATACGA
GCCCGTCCTCGGCACCAACCCCATCGCCGTCGGCGTGCCGCGCCTCGACG
GACACCCGCCGCTCGTCCTGGACATGGCTACCTCGGCCTACCCGTTCTTC
GGCCTGCTCGAGGCCAAGACGGCAGGGCGGCCTATCCCGGGCGATGTGGC
ATACGACGCTCAGGGGAACCTGACGACGGACCCGGCGGCGGCCATCGCCG
GCGCAATTCGCGGGTGGGGCGGGCACAAGGGCGGCCACCTGGCACTCATG
GTT
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