mRNA_P-wetherbeei_contig21375.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21375.1.1 vs. uniprot
Match: A0A482UJQ7_9ARCH (Flavoprotein domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UJQ7_9ARCH) HSP 1 Score: 100 bits (248), Expect = 6.560e-25 Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = 1
Query: 76 TCVARAWDFPRGKPMVVCPAMNTAMWQHPFTRRHLDALRDLGVTVVDPVAKMLACGDTGVGALADLPAIVVAVREALHLNVVAPAAS 336
TCV RAWDF GKP++V PAMNT MW HPFT +HL L++LG+ V+ P+AK LACGD G GA+A + IV AV L+ P+ S
Sbjct: 24 TCVLRAWDFDGGKPILVAPAMNTHMWTHPFTAKHLAVLQELGMHVIPPIAKRLACGDVGHGAMAPVEDIVEAVVSTLYTRKALPSTS 110
BLAST of mRNA_P-wetherbeei_contig21375.1.1 vs. uniprot
Match: A0A507E920_9FUNG (Flavoprotein domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E920_9FUNG) HSP 1 Score: 100 bits (249), Expect = 2.980e-24 Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 76 TCVARAWDFPRGKPMVVCPAMNTAMWQHPFTRRHLDALRDLGVTVVDPVAKMLACGDTGVGALADLPAIVVAVREAL 306
TC+ RAWD KP+++CPAMNT MWQHPFT++HLD +LG TV++P+ K LACGDTGVGA+A+ I VRE +
Sbjct: 119 TCILRAWD--TTKPVILCPAMNTFMWQHPFTKKHLDVCVELGYTVIEPIVKTLACGDTGVGAMAEPEFIANVVRETI 193
BLAST of mRNA_P-wetherbeei_contig21375.1.1 vs. uniprot
Match: A0A835YV88_9STRA (Flavoprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV88_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.190e-23 Identity = 50/77 (64.94%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 76 TCVARAWDFPRGKPMVVCPAMNTAMWQHPFTRRHLDALRDLGVTVVDPVAKMLACGDTGVGALADLPAIVVAVREAL 306
TCVARAWD KP++V PAMNT MW HP T RHL +L LGVT + PV K LACGDTG GALAD+ I AVR AL
Sbjct: 129 TCVARAWDVT--KPLIVAPAMNTHMWSHPLTARHLASLGVLGVTTISPVVKTLACGDTGTGALADVADIAAAVRAAL 203
BLAST of mRNA_P-wetherbeei_contig21375.1.1 vs. uniprot
Match: A0A061R429_9CHLO (Phosphopantothenoylcysteine decarboxylase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R429_9CHLO) HSP 1 Score: 98.2 bits (243), Expect = 2.250e-23 Identity = 50/78 (64.10%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 76 TCVARAWDFPRGKPMVVCPAMNTAMWQHPFTRRHLDALRDLGVTVVDPVAKMLACGDTGVGALADLPAIVVAVREALH 309
T + RAWDF KP+VV PAMNT MW +PFTRRHL+ L LGV VV PV+K LACGD G GALAD I A R ALH
Sbjct: 118 TSIIRAWDF--AKPLVVAPAMNTQMWDNPFTRRHLETLESLGVAVVPPVSKALACGDVGQGALADPLEIARACRAALH 193
BLAST of mRNA_P-wetherbeei_contig21375.1.1 vs. uniprot
Match: A0A2V0NZJ8_9CHLO (Phosphopantothenoylcysteine decarboxylase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NZJ8_9CHLO) HSP 1 Score: 99.4 bits (246), Expect = 2.340e-23 Identity = 50/78 (64.10%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 76 TCVARAWDFPRGKPMVVCPAMNTAMWQHPFTRRHLDALRDLGVTVVDPVAKMLACGDTGVGALADLPAIVVAVREALH 309
TCV RAWDF R P++V PAMNT MW PFTRRHLDAL LGV VV PV K LACGD G+GA+A A+ AV AL
Sbjct: 142 TCVVRAWDFDR--PLLVAPAMNTLMWDSPFTRRHLDALAQLGVAVVPPVGKRLACGDVGLGAMAAPEAVAAAVAGALR 217
BLAST of mRNA_P-wetherbeei_contig21375.1.1 vs. uniprot
Match: A0A383VT09_TETOB (Flavoprotein domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VT09_TETOB) HSP 1 Score: 95.1 bits (235), Expect = 3.930e-23 Identity = 47/78 (60.26%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 76 TCVARAWDFPRGKPMVVCPAMNTAMWQHPFTRRHLDALRDLGVTVVDPVAKMLACGDTGVGALADLPAIVVAVREALH 309
TC+ARAWDF R P++V PAMNT MW PFT +HL A++ LGVTVVDPV+K LACGD G GA+A I A AL
Sbjct: 21 TCIARAWDFKR--PLLVAPAMNTFMWDSPFTAQHLAAIQQLGVTVVDPVSKTLACGDVGQGAMASPETIAAACEVALQ 96
BLAST of mRNA_P-wetherbeei_contig21375.1.1 vs. uniprot
Match: A0A8H7QXM9_9FUNG (Flavoprotein domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7QXM9_9FUNG) HSP 1 Score: 97.1 bits (240), Expect = 4.420e-23 Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 1
Query: 76 TCVARAWDFPRGKPMVVCPAMNTAMWQHPFTRRHLDALRD-LGVTVVDPVAKMLACGDTGVGALAD 270
TCV RAWD KP+VVCPAMNT+MW HP T RH+D LRD LG +VDP++K LACGDTG+GA+A+
Sbjct: 105 TCVLRAWDIK--KPVVVCPAMNTSMWHHPLTSRHMDVLRDVLGYHIVDPISKKLACGDTGIGAMAE 168
BLAST of mRNA_P-wetherbeei_contig21375.1.1 vs. uniprot
Match: A0A7R9QYF4_9ACAR (Hypothetical protein n=2 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9QYF4_9ACAR) HSP 1 Score: 94.0 bits (232), Expect = 7.160e-23 Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 76 TCVARAWDFPRGKPMVVCPAMNTAMWQHPFTRRHLDALRDLGVTVVDPVAKMLACGDTGVGALADLPAIVVAVREALHL 312
TCV RAWD KP++ CPAMN MW HP T+ HLDAL+ G V P+ K LACGDTG+GA+A++ AIV V++ L L
Sbjct: 14 TCVLRAWD--ADKPLLYCPAMNVNMWSHPITQTHLDALQSFGYKQVGPIVKRLACGDTGMGAMAEVSAIVHEVKQVLQL 90
BLAST of mRNA_P-wetherbeei_contig21375.1.1 vs. uniprot
Match: A0A4P9ZUD6_9FUNG (Flavo protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZUD6_9FUNG) HSP 1 Score: 95.9 bits (237), Expect = 1.870e-22 Identity = 47/88 (53.41%), Postives = 63/88 (71.59%), Query Frame = 1
Query: 76 TCVARAWDFPRGKPMVVCPAMNTAMWQHPFTRRHLDAL-RDLGVTVVDPVAKMLACGDTGVGALADLPAIVVAVREALHLNVVAPAAS 336
TCV RAWDF KP +VCPAMNT MW HPFT +HL L +LG+ V+ P++K+LACGDTGVGA+A+ I+ V+ ++N + P+ S
Sbjct: 106 TCVLRAWDF--SKPCIVCPAMNTHMWDHPFTAKHLRVLTEELGIKVISPISKLLACGDTGVGAMAEPQDIITRVQS--YMNDLIPSPS 189
BLAST of mRNA_P-wetherbeei_contig21375.1.1 vs. uniprot
Match: A0A835V9L1_VANPL (Flavoprotein domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835V9L1_VANPL) HSP 1 Score: 95.1 bits (235), Expect = 3.910e-22 Identity = 42/74 (56.76%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 76 TCVARAWDFPRGKPMVVCPAMNTAMWQHPFTRRHLDALRDLGVTVVDPVAKMLACGDTGVGALADLPAIVVAVR 297
TC+ RAWD+ KP+ V PAMNT MW +PFT++HL+A+R+LG+T++ P+ K LACGD G GA+A+ AI AVR
Sbjct: 121 TCIIRAWDY--SKPLYVAPAMNTLMWSNPFTKKHLEAIRELGITMIPPITKRLACGDYGNGAMAEPSAIYTAVR 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21375.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21375.1.1 >prot_P-wetherbeei_contig21375.1.1 ID=prot_P-wetherbeei_contig21375.1.1|Name=mRNA_P-wetherbeei_contig21375.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=106bp MRKQHLTAMVLPSAISCHQTCVARAWDFPRGKPMVVCPAMNTAMWQHPFTback to top mRNA from alignment at P-wetherbeei_contig21375:2..337+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21375.1.1 ID=mRNA_P-wetherbeei_contig21375.1.1|Name=mRNA_P-wetherbeei_contig21375.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=336bp|location=Sequence derived from alignment at P-wetherbeei_contig21375:2..337+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21375:2..337+ >mRNA_P-wetherbeei_contig21375.1.1 ID=mRNA_P-wetherbeei_contig21375.1.1|Name=mRNA_P-wetherbeei_contig21375.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=318bp|location=Sequence derived from alignment at P-wetherbeei_contig21375:2..337+ (Phaeothamnion wetherbeei SAG_119_79)back to top |