mRNA_P-wetherbeei_contig21328.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21328.1.1 vs. uniprot
Match: A0A835ZFQ8_9STRA (U-box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ8_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.430e-26 Identity = 50/87 (57.47%), Postives = 69/87 (79.31%), Query Frame = 1
Query: 1 MLASLRAAGVDVPPEFICPLSQEIMEDPVLLSGDGRVYERASAAEWLTNSTFSPSTGLPLGACSFLASHHALRRQIAAFVSDHAAVL 261
++ LRAAGV VP EF+CPL+ ++M +PVLL+GD R Y+ + A+WL +++ SPSTG PLGACSF+ HALR++IAAFV +HA+VL
Sbjct: 204 VVTKLRAAGVAVPSEFVCPLTGDVMREPVLLTGDQRHYDSKACAKWLISNSVSPSTGEPLGACSFMVPAHALRQRIAAFVEEHASVL 290
BLAST of mRNA_P-wetherbeei_contig21328.1.1 vs. uniprot
Match: A0A835Z8R9_9STRA (U-box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8R9_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 5.890e-23 Identity = 45/87 (51.72%), Postives = 65/87 (74.71%), Query Frame = 1
Query: 1 MLASLRAAGVDVPPEFICPLSQEIMEDPVLLSGDGRVYERASAAEWLTNSTFSPSTGLPLGACSFLASHHALRRQIAAFVSDHAAVL 261
++A LRAAGV VPPEF+C L+ ++M DPVLL+GDGR YE ++ A WL + SP+T L AC+F+A HAL+++I AF+ +H+ +L
Sbjct: 195 LVARLRAAGVKVPPEFVCALTNDVMRDPVLLTGDGRHYESSACARWLVSHNTSPTTHAQLPACNFMARAHALKQRIWAFLDEHSDIL 281
BLAST of mRNA_P-wetherbeei_contig21328.1.1 vs. uniprot
Match: A0A7S1I388_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I388_9EUGL) HSP 1 Score: 64.7 bits (156), Expect = 2.410e-11 Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 28 VDVPPEFICPLSQEIMEDPVLLSGDGRVYERASAAEWLTNSTFSPSTGLPLGACSFLASHHALRRQIAAFVSDHAAV 258
+DVPP+F+CPLS EIM+DPV+ DG YERA EWL SP TGL + L + LR I F+ + AV
Sbjct: 7 MDVPPDFLCPLSLEIMQDPVVTE-DGHSYERAKIEEWLRYRRTSPMTGLAIANPETLTPNITLRTSIQDFMEKNRAV 82
BLAST of mRNA_P-wetherbeei_contig21328.1.1 vs. uniprot
Match: A0A7S4U8E3_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4U8E3_GUITH) HSP 1 Score: 63.5 bits (153), Expect = 3.830e-11 Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 1
Query: 13 LRAAGVDVPPEFICPLSQEIMEDPVLLSGDGRVYERASAAEWLTNSTFSPSTGLPLGACSFLASHHALRRQIAAFVSDH 249
L G+ +PPE +CP+S +IM+DPV+ S DG YER + W+ SP T L L +HALR I +F+ ++
Sbjct: 28 LLPEGLSIPPEMLCPISSDIMKDPVICS-DGHTYEREAITRWVKRKATSPMTNQSLQEPVMLIPNHALRSLIQSFIENN 105
BLAST of mRNA_P-wetherbeei_contig21328.1.1 vs. uniprot
Match: A0A2V0PQL2_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PQL2_9CHLO) HSP 1 Score: 66.2 bits (160), Expect = 9.380e-11 Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = 1
Query: 4 LASLRAAG---VDVPPE-FICPLSQEIMEDPVLLSGDGRVYERASAAEWLTNSTFSPSTGLPLGACSFLASHHALRRQIAAFVSDH 249
LASL A G +D PP F+CP++QE+MEDPV S DG YER + A W+ N SP T LPL A + L ++ALR + ++ H
Sbjct: 773 LASLGAGGSAALDEPPSMFVCPITQEVMEDPVFAS-DGFTYERDAIAGWIANHNTSPMTNLPL-AHAGLTPNNALRSSVREWLDQH 856
BLAST of mRNA_P-wetherbeei_contig21328.1.1 vs. uniprot
Match: R1DRS3_EMIHU (U-box domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DRS3_EMIHU) HSP 1 Score: 61.2 bits (147), Expect = 2.870e-10 Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 37 PPEFICPLSQEIMEDPVLLSGDGRVYERASAAEWLTNSTFSPSTGLPLGACSFLASHHALRRQIAAFVSDHAA 255
P +FICP++ E+M DPV+ + DG YER++ WL + SP TG L + LA+HH LRR I + H+A
Sbjct: 34 PADFICPITTEVMSDPVM-AADGHAYERSAIERWLATKSTSPMTGEELQH-TCLANHHMLRRMIREWGETHSA 104
BLAST of mRNA_P-wetherbeei_contig21328.1.1 vs. uniprot
Match: R1CYM4_EMIHU (U-box domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CYM4_EMIHU) HSP 1 Score: 61.6 bits (148), Expect = 3.650e-10 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 25 GVDVPPE-FICPLSQEIMEDPVLLSGDGRVYERASAAEWLTNSTFSPSTGLPLGACSFLASHHALRRQIAAFVSDHAA 255
G + PP+ FICP++ E+M DPV+ + DG YER++ WL + SP TG L + LA+HH LRR I + H+A
Sbjct: 55 GEEEPPDDFICPITTEVMSDPVM-AADGHAYERSAIERWLATKSTSPMTGEELQH-TCLANHHMLRRMIREWGETHSA 130
BLAST of mRNA_P-wetherbeei_contig21328.1.1 vs. uniprot
Match: A0A7S0YUT2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YUT2_9CRYP) HSP 1 Score: 61.2 bits (147), Expect = 4.420e-10 Identity = 37/84 (44.05%), Postives = 48/84 (57.14%), Query Frame = 1
Query: 10 SLRAA----GVDVPPEFICPLSQEIMEDPVLLSGDGRVYERASAAEWLTNSTFSPSTGLPLGACSFLASHHALRRQIAAFVSDH 249
+LR+A G+ VP F+CP+S E+M DPV+L+ DG VYER + WL + SP T + A L HALR I FV H
Sbjct: 25 NLRSAFEERGIPVPDAFLCPISMEVMSDPVILT-DGHVYERKTIERWLLSHDTSPKTNQVV-ATDQLIPCHALRTVIQDFVETH 106
BLAST of mRNA_P-wetherbeei_contig21328.1.1 vs. uniprot
Match: R1BAW1_EMIHU (U-box domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BAW1_EMIHU) HSP 1 Score: 61.6 bits (148), Expect = 4.490e-10 Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 37 PPEFICPLSQEIMEDPVLLSGDGRVYERASAAEWLTNSTFSPSTGLPLGACSFLASHHALRRQI 228
P +FICP++ E+M DPV+ + DG YER++ WL + SP TG L SFLA +H LRRQI
Sbjct: 73 PADFICPITTELMSDPVM-AADGHSYERSAIKRWLATKSTSPMTGEAL-VHSFLAPNHTLRRQI 134
BLAST of mRNA_P-wetherbeei_contig21328.1.1 vs. uniprot
Match: R1D1Q3_EMIHU (U-box domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D1Q3_EMIHU) HSP 1 Score: 61.6 bits (148), Expect = 5.480e-10 Identity = 36/87 (41.38%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 4 LASLRAAGVDV---PPEFICPLSQEIMEDPVLLSGDGRVYERASAAEWLTNSTFSPSTGLPLGACSFLASHHALRRQIAAFVSDHAA 255
LA+ R V+ P +FICP++ E+M DPV+ + DG YER++ WL + SP TG L + LA+HH LRR I + H+A
Sbjct: 63 LAAERPPSVEEEEPPADFICPITTEVMSDPVM-AADGHAYERSAIERWLATKSTSPMTGEELQH-TCLANHHMLRRMIREWGETHSA 147 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21328.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21328.1.1 >prot_P-wetherbeei_contig21328.1.1 ID=prot_P-wetherbeei_contig21328.1.1|Name=mRNA_P-wetherbeei_contig21328.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=87bp MLASLRAAGVDVPPEFICPLSQEIMEDPVLLSGDGRVYERASAAEWLTNSback to top mRNA from alignment at P-wetherbeei_contig21328:124..581+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21328.1.1 ID=mRNA_P-wetherbeei_contig21328.1.1|Name=mRNA_P-wetherbeei_contig21328.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=458bp|location=Sequence derived from alignment at P-wetherbeei_contig21328:124..581+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21328:124..581+ >mRNA_P-wetherbeei_contig21328.1.1 ID=mRNA_P-wetherbeei_contig21328.1.1|Name=mRNA_P-wetherbeei_contig21328.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=261bp|location=Sequence derived from alignment at P-wetherbeei_contig21328:124..581+ (Phaeothamnion wetherbeei SAG_119_79)back to top |