mRNA_P-wetherbeei_contig21254.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-wetherbeei_contig21254.1.1
Unique Name	mRNA_P-wetherbeei_contig21254.1.1
Type	mRNA
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)

Homology

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BLAST of mRNA_P-wetherbeei_contig21254.1.1 vs. uniprot
Match: A0A1F4BNQ7_9PROT (Serine--tRNA ligase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BNQ7_9PROT)

HSP 1 Score: 423 bits (1088), Expect = 1.210e-144
Identity = 231/327 (70.64%), Postives = 265/327 (81.04%), Query Frame = 1

Query:    1 MLDIQLLRNDLPDVAARLADRGMTLDTAGFERLEANRKAVQTQTQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKLKALEQDLAKAQAELDGFLGVIANLPHASVPIGKSADDNAEIRRVGAPRKFDFTAKDHVDLGAGLGQIDFDTAAKLAGARFVVLKSHMARLHRALAQFMLDLHTQEHGYTEVYVPYMVTAECANGVSSLAKFKDDLFKLEGRDLYLIPTAEYPVTNFVRGEILSSESLPLKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIAHPSKSYELLEELTGHAETILKRLELPYRVMTLCTGDMG 981
            MLD+QLLR+DL  VA RLADRG     A FE+LEA RKAVQT+T+  XXXXXXXXXXXXXXXXXXX             D+LKALEQDLA    ELD  L VI NLPHASVP+GKS +DN E+RR G PR F F  +DHVD+G  LG +DF+ A++++GARFVV++  +A+LHRAL QFMLD HT+EHGYTEVYVPY+VT ECA+GVSSL KF+ DLFK+EGRDLYL+PTAEYPVTN VR  I+  E LPLKFVCHTPCFRSEAGS+GKDTRGMIRQHQF+KVELVQ+ HP +SY+ LEELT HAETILKRLELPYRV+TLCTGDMG
Sbjct:    1 MLDVQLLRSDLQAVAKRLADRGYAFPAAEFEKLEAGRKAVQTETEXXXXXXXXXXXXXXXXXXXXXDASQFMAQVSAGADRLKALEQDLAAMLGELDELLRVIPNLPHASVPVGKSPEDNPELRRGGTPRTFVFPVRDHVDVGTALG-LDFEAASRISGARFVVIRGALAQLHRALTQFMLDTHTREHGYTEVYVPYLVTGECADGVSSLEKFRGDLFKVEGRDLYLVPTAEYPVTNIVREGIVPGEKLPLKFVCHTPCFRSEAGSHGKDTRGMIRQHQFEKVELVQVVHPQRSYQALEELTVHAETILKRLELPYRVVTLCTGDMG 326

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BLAST of mRNA_P-wetherbeei_contig21254.1.1 vs. uniprot
Match: A0A1F4D8I8_9PROT (Serine--tRNA ligase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4D8I8_9PROT)

HSP 1 Score: 417 bits (1071), Expect = 5.420e-142
Identity = 214/331 (64.65%), Postives = 242/331 (73.11%), Query Frame = 1

Query:    1 MLDIQLLRNDLPDVAARLADRGMTLDTAGFERLEANRKAVQTQTQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKLKALEQDLAKAQAELDGFLGVIANLPHASVPIGKSADDNAEIRRVGAPRKFDFTAKDHVDLGAGLGQIDFDTAAKLAGARFVVLKSHMARLHRALAQFMLDLHTQEHGYTEVYVPYMVTAECANGVSSLAKFKDDLFKLEGRD----LYLIPTAEYPVTNFVRGEILSSESLPLKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIAHPSKSYELLEELTGHAETILKRLELPYRVMTLCTGDMG 981
            MLDIQLLR+DLP VA RLADRG++LD   FE LEA RK VQ +TQEL                                D+LKALEQ L + Q  L+ FL VI N+PH SVP+G S +DN E+RRVG PR FDF  KDHVD+GAGL  +DFDTAAK++GARFV++   MARLHRA+AQFMLD+HT EHGYTEVY PY+V A    GV+SL KF+ DLF +  RD    LYLIPTAE PVTN VRGEI+  + LPLKFVCHTPCFRSEAGS+GKDTRGMIRQHQFDKVELVQI HP KSY+ LEELT HAE ILKRLELPYR +TLCTGDMG
Sbjct:    1 MLDIQLLRSDLPGVAKRLADRGLSLDVTAFEALEAQRKTVQVETQELQARRNQLSKQIGQAKAKGEDASQLMTQVNAQADQLKALEQRLVEIQGRLNEFLLVIPNVPHVSVPVGTSPEDNLEVRRVGVPRTFDFVVKDHVDIGAGLKMLDFDTAAKISGARFVLMTGAMARLHRAIAQFMLDVHTAEHGYTEVYAPYLVNAASVQGVTSLQKFEGDLFAVP-RDNEEKLYLIPTAEVPVTNIVRGEIVPLQQLPLKFVCHTPCFRSEAGSHGKDTRGMIRQHQFDKVELVQIVHPQKSYDGLEELTSHAEVILKRLELPYRTVTLCTGDMG 330

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BLAST of mRNA_P-wetherbeei_contig21254.1.1 vs. uniprot
Match: A0A1P8FKU6_9PROT (Serine--tRNA ligase n=1 Tax=Betaproteobacteria bacterium GR16-43 TaxID=1904640 RepID=A0A1P8FKU6_9PROT)

HSP 1 Score: 416 bits (1068), Expect = 1.710e-141
Identity = 211/327 (64.53%), Postives = 241/327 (73.70%), Query Frame = 1

Query:    1 MLDIQLLRNDLPDVAARLADRGMTLDTAGFERLEANRKAVQTQTQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKLKALEQDLAKAQAELDGFLGVIANLPHASVPIGKSADDNAEIRRVGAPRKFDFTAKDHVDLGAGLGQIDFDTAAKLAGARFVVLKSHMARLHRALAQFMLDLHTQEHGYTEVYVPYMVTAECANGVSSLAKFKDDLFKLEGRDLYLIPTAEYPVTNFVRGEILSSESLPLKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIAHPSKSYELLEELTGHAETILKRLELPYRVMTLCTGDMG 981
            MLDIQLLR DLP   A L  RG   D A F +LE  RK+VQ++T+EL                                D+LKA E  LA+ Q +   FL V+ N+P A VP GKS  DN E+RR G PRKFDF  KDHVD+GAGLG +DFDTA+KLAGARF VLK  +ARLHRALAQFMLD+ T+EHGYTEVYVPYMVT ECA+GVSSLAKFK+DLFK+EGRDLYLIPT+EYPVTNFVR  I+ ++ LP+KF CH+PCFRSEAGSYGKDTRGMIRQHQFDKVELVQIAHP KS E  EELT +AE IL++LELPYR M LCTGD+G
Sbjct:    1 MLDIQLLRKDLPAAIAGLKRRGFAFDEAAFLKLEGERKSVQSRTEELQGKKNTLSKQIGMLKGKGEDASVAMAESTAITDELKANETKLAEIQEKQSAFLRVVPNIPRADVPDGKSEHDNVEVRRWGTPRKFDFKPKDHVDVGAGLGGLDFDTASKLAGARFSVLKGGVARLHRALAQFMLDVQTREHGYTEVYVPYMVTGECADGVSSLAKFKEDLFKIEGRDLYLIPTSEYPVTNFVRDTIVDAKDLPMKFACHSPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIAHPDKSTEAHEELTRNAEAILQKLELPYRTMLLCTGDIG 327

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BLAST of mRNA_P-wetherbeei_contig21254.1.1 vs. uniprot
Match: A0A6M4H8K0_9PROT (Serine--tRNA ligase n=1 Tax=Usitatibacter palustris TaxID=2732487 RepID=A0A6M4H8K0_9PROT)

HSP 1 Score: 412 bits (1058), Expect = 4.440e-140
Identity = 210/327 (64.22%), Postives = 236/327 (72.17%), Query Frame = 1

Query:    1 MLDIQLLRNDLPDVAARLADRGMTLDTAGFERLEANRKAVQTQTQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKLKALEQDLAKAQAELDGFLGVIANLPHASVPIGKSADDNAEIRRVGAPRKFDFTAKDHVDLGAGLGQIDFDTAAKLAGARFVVLKSHMARLHRALAQFMLDLHTQEHGYTEVYVPYMVTAECANGVSSLAKFKDDLFKLEGRDLYLIPTAEYPVTNFVRGEILSSESLPLKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIAHPSKSYELLEELTGHAETILKRLELPYRVMTLCTGDMG 981
            MLDIQ LR DLP V A L  RG+  D AGF  LE  R+ +Q++T+EL                                D+LKA E  LA  Q  L  FL VI N+P A VP GKS+DDN E RR G PR FDF  KDHVD+GA LG +DFDTAAKL+GARF VLK  +ARLHRAL QFMLD+ TQEHGYTEVY PYMVT ECA+GVSSLAKFK+DLFK+EGRDLYLIPT+EYPVTNF+R  I+ ++ LPLKF CH+PCFRSEAGSYGKDTRGMIRQHQFDKVELVQI HP +S +  EELT HAE ILK+LELPYRVM LCTGD G
Sbjct:    1 MLDIQTLRKDLPAVVAGLKRRGVEFDEAGFRVLEDERRTLQSRTEELQAKRNSLSKQIGALKGKGEDASAVMAEVGGLGDELKANEVRLAALQESLTAFLRVIPNVPRADVPDGKSSDDNVEQRRGGTPRTFDFAVKDHVDVGAALGGLDFDTAAKLSGARFTVLKGGVARLHRALGQFMLDVQTQEHGYTEVYAPYMVTGECADGVSSLAKFKEDLFKIEGRDLYLIPTSEYPVTNFMRDTIVEAKELPLKFACHSPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIVHPDQSVQAHEELTSHAEAILKKLELPYRVMLLCTGDTG 327

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BLAST of mRNA_P-wetherbeei_contig21254.1.1 vs. uniprot
Match: A0A521W3G2_9PROT (Serine--tRNA ligase n=4 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521W3G2_9PROT)

HSP 1 Score: 409 bits (1050), Expect = 7.250e-139
Identity = 211/327 (64.53%), Postives = 233/327 (71.25%), Query Frame = 1

Query:    1 MLDIQLLRNDLPDVAARLADRGMTLDTAGFERLEANRKAVQTQTQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKLKALEQDLAKAQAELDGFLGVIANLPHASVPIGKSADDNAEIRRVGAPRKFDFTAKDHVDLGAGLGQIDFDTAAKLAGARFVVLKSHMARLHRALAQFMLDLHTQEHGYTEVYVPYMVTAECANGVSSLAKFKDDLFKLEGRDLYLIPTAEYPVTNFVRGEILSSESLPLKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIAHPSKSYELLEELTGHAETILKRLELPYRVMTLCTGDMG 981
            M+DIQLLR +L  VAARL  RG       F  LEA RK +QT+TQ+                                   L  LE  LA+ Q +L   L VI NLPH SVP G     N E RR G PR FDF  KDHVD+GA LG +DFDTAAKLAGARF V+K  +ARLHRA+AQFMLD+HT+EHGYTEVYVPYMV+ ECANGVSSLAKFKDDLFKLEGRDLYLIPTAEYPVTNFVR EI+  E+LPLKFVCH+PCFRSEAG+ GKDTRGMIRQHQFDKVELVQ+  P  SY   EELTGHAE IL+RLELPYRV+TLCTGDMG
Sbjct:    1 MIDIQLLRTNLDGVAARLQARGFAFPREAFLALEAERKDIQTRTQDWQSRRNAQAKRIGQAKSKGEDVATLMAESTEINAGLGTLEARLAQVQGKLQSLLEVIPNLPHESVPPGDGPGQNVEQRRWGTPRAFDFAVKDHVDVGATLGGLDFDTAAKLAGARFAVMKGGVARLHRAIAQFMLDVHTEEHGYTEVYVPYMVSGECANGVSSLAKFKDDLFKLEGRDLYLIPTAEYPVTNFVRNEIVPLEALPLKFVCHSPCFRSEAGAAGKDTRGMIRQHQFDKVELVQVVRPEASYAAHEELTGHAEVILRRLELPYRVVTLCTGDMG 327

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BLAST of mRNA_P-wetherbeei_contig21254.1.1 vs. uniprot
Match: A0A1F3YN13_9PROT (Serine--tRNA ligase n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YN13_9PROT)

HSP 1 Score: 408 bits (1048), Expect = 1.560e-138
Identity = 210/329 (63.83%), Postives = 238/329 (72.34%), Query Frame = 1

Query:    1 MLDIQLLRNDLPDVAARLADRGMTLDTAGFERLEANRKAVQTQTQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--DKLKALEQDLAKAQAELDGFLGVIANLPHASVPIGKSADDNAEIRRVGAPRKFDFTAKDHVDLGAGLGQIDFDTAAKLAGARFVVLKSHMARLHRALAQFMLDLHTQEHGYTEVYVPYMVTAECANGVSSLAKFKDDLFKLEGRDLYLIPTAEYPVTNFVRGEILSSESLPLKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIAHPSKSYELLEELTGHAETILKRLELPYRVMTLCTGDMG 981
            M+DIQLLRN +  VAARL  RG  LD +GFE+LE +RK +QT T++L                                  DKLK +E      QA L  F+ +I NL H SVP+G   +D AE RR G  RKFDF A+DHVD+GA LG +DFDTAAKLAGARF V+K  +ARLHRALAQFMLD+HT EHGYTE YVPYMV+  CA+GVSSLAKFK DLFK+E RDLYLIPTAEYPVTNFVR EI+  E LPLKFVCH+PCFRSEAG+ GKDTRGMIR HQFDKVELVQI HPS+SY   EELTGHAE ILK+LELPYRV+TLCTGD G
Sbjct:    1 MIDIQLLRNSIDTVAARLGTRGYELDVSGFEKLEKHRKDIQTTTEQLQSQRNAVSKQIGQAKARKDEALVGALMAQAADFGDKLKQMEVQNESVQARLREFVSLIPNLTHGSVPVGSRPEDCAEQRRWGEARKFDFAARDHVDIGAALGGLDFDTAAKLAGARFAVMKGGVARLHRALAQFMLDVHTTEHGYTEAYVPYMVSGACADGVSSLAKFKGDLFKIEDRDLYLIPTAEYPVTNFVRDEIVPLEKLPLKFVCHSPCFRSEAGAAGKDTRGMIRNHQFDKVELVQIVHPSQSYLAHEELTGHAEAILKKLELPYRVVTLCTGDTG 329

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BLAST of mRNA_P-wetherbeei_contig21254.1.1 vs. uniprot
Match: A0A7C2YL04_9PROT (Serine--tRNA ligase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2YL04_9PROT)

HSP 1 Score: 406 bits (1043), Expect = 9.880e-138
Identity = 238/330 (72.12%), Postives = 265/330 (80.30%), Query Frame = 1

Query:    1 MLDIQLLRNDLPDVAARLADRGMTLDTAGFERLEANRKAVQTQTQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKLKALEQDLAKAQAELDGFLGVIANLPHASVPIGKSADDNAEIRRVGAPRKFDFTAKDHVDLGAGLGQIDFDTAAKLAGARFVVLKSHMARLHRALAQFMLDLHTQEHGYTEVYVPYMVTAECANGVSSLAKFKDDLFKL---EGRDLYLIPTAEYPVTNFVRGEILSSESLPLKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIAHPSKSYELLEELTGHAETILKRLELPYRVMTLCTGDMG 981
            MLDIQLLR+DL  VA RLA RG  LDTAGF+ LEA RKAVQ +TQ  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         LA  Q  L+ FL V+ NLPHASVP G S++DNAE+RR+G PR +DF  KDHVDLG GLG +DFDTAAK++GARFVV+   +ARLHRAL QFMLD+HT+EHGYTEVY PY+V A    GV+SL KF+ DLF +    G   YLIPTAE PVTN VRG+I+    LPLKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQI HP +SY+ LEELTGHAETIL+RLELPYRVM LCTGD+G
Sbjct:    1 MLDIQLLRSDLDQVAKRLASRGFPLDTAGFQALEAERKAVQVETQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAAVQDRLNNFLLVVPNLPHASVPTGNSSEDNAEVRRIGTPRTYDFAVKDHVDLGTGLGMLDFDTAAKISGARFVVMTGALARLHRALGQFMLDVHTREHGYTEVYAPYLVNAASVQGVTSLEKFETDLFAVPRENGEKFYLIPTAEVPVTNMVRGDIVPGPRLPLKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIVHPDRSYDALEELTGHAETILRRLELPYRVMALCTGDIG 330

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BLAST of mRNA_P-wetherbeei_contig21254.1.1 vs. uniprot
Match: A0A1F4A764_9PROT (Serine--tRNA ligase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4A764_9PROT)

HSP 1 Score: 403 bits (1035), Expect = 1.560e-136
Identity = 238/330 (72.12%), Postives = 269/330 (81.52%), Query Frame = 1

Query:    1 MLDIQLLRNDLPDVAARLADRGMTLDTAGFERLEANRKAVQTQTQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKLKALEQDLAKAQAELDGFLGVIANLPHASVPIGKSADDNAEIRRVGAPRKFDFTAKDHVDLGAGLGQIDFDTAAKLAGARFVVLKSHMARLHRALAQFMLDLHTQEHGYTEVYVPYMVTAECANGVSSLAKFKDDLFKL---EGRDLYLIPTAEYPVTNFVRGEILSSESLPLKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIAHPSKSYELLEELTGHAETILKRLELPYRVMTLCTGDMG 981
            MLDIQLLR+ L  VA RL DRG     A FE LEA RK VQ +TQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+LKALEQ LA  Q  L+ FL VI N+PHASVP+GKSADDNAE+R+VGAPR FDF  KDHVD+GA L  +DF+TAAK++G+RF ++   +AR+HRA+AQFMLD+HT+EHGYTEVY PY+V A    GV+SL KF+ DLF +       LYLIPTAE PVTN VR EI++ + LPLKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQI  P +SYE LEELT HAETIL+RLELPYR +TLCTGDMG
Sbjct:    1 MLDIQLLRSGLQGVAQRLVDRGFVFPAAEFEGLEAERKKVQIETQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADQLKALEQRLADVQRRLNEFLLVIPNVPHASVPVGKSADDNAEVRQVGAPRVFDFAVKDHVDVGAALNMLDFETAAKISGSRFSIMTGALARMHRAIAQFMLDVHTREHGYTEVYAPYLVNAASVQGVTSLQKFEGDLFAVPRDNDEKLYLIPTAEVPVTNIVRDEIVALDRLPLKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIVRPEQSYERLEELTRHAETILQRLELPYRTVTLCTGDMG 330

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BLAST of mRNA_P-wetherbeei_contig21254.1.1 vs. uniprot
Match: A0A838JL68_9BURK (Serine--tRNA ligase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A838JL68_9BURK)

HSP 1 Score: 402 bits (1032), Expect = 3.890e-136
Identity = 204/327 (62.39%), Postives = 238/327 (72.78%), Query Frame = 1

Query:    1 MLDIQLLRNDLPDVAARLADRGMTLDTAGFERLEANRKAVQTQTQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKLKALEQDLAKAQAELDGFLGVIANLPHASVPIGKSADDNAEIRRVGAPRKFDFTAKDHVDLGAGLGQIDFDTAAKLAGARFVVLKSHMARLHRALAQFMLDLHTQEHGYTEVYVPYMVTAECANGVSSLAKFKDDLFKLEGRDLYLIPTAEYPVTNFVRGEILSSESLPLKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIAHPSKSYELLEELTGHAETILKRLELPYRVMTLCTGDMG 981
            MLDIQLLR+DL  V  RLA RG TLD+A F   E  RK +Q +T+ L                                D+LK L+ +L   Q  L  FL V+ NLP  +VP+G+SADDN E+RR G PR+F+F AKDHVD+GA LG +DF+TAAKLAGARF V++  +ARLHRAL QFMLD+HT+EHGYTEVYVPY+V+ ECA+GVSSLAKF++DLFKLEGRDLYLIPTAEYPVTNFVR  I+    LPLKF C++PCFRSEAGSYGKDTRGMIRQHQFDKVE+VQI  P  S E  E+LT HAETILK+L LPYR M LCTGDMG
Sbjct:    1 MLDIQLLRSDLATVTQRLALRGFTLDSAAFSAYEDERKHLQIRTEALQAKRNSASKRIGQAKAKGEATAGIMNEVAHVGDELKRLQGELDVVQNRLVEFLMVLPNLPDDAVPVGRSADDNVEVRRWGEPRQFNFPAKDHVDIGAALGGLDFETAAKLAGARFSVMRGGVARLHRALGQFMLDIHTREHGYTEVYVPYLVSGECADGVSSLAKFREDLFKLEGRDLYLIPTAEYPVTNFVRDSIVDVTELPLKFACYSPCFRSEAGSYGKDTRGMIRQHQFDKVEIVQIVQPEHSAEAHEQLTAHAETILKKLALPYRTMLLCTGDMG 327

[Close]

BLAST of mRNA_P-wetherbeei_contig21254.1.1 vs. uniprot
Match: A0A1F4B2Z9_9PROT (Serine--tRNA ligase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B2Z9_9PROT)

HSP 1 Score: 401 bits (1030), Expect = 8.640e-136
Identity = 208/329 (63.22%), Postives = 236/329 (71.73%), Query Frame = 1

Query:    1 MLDIQLLRNDLPDVAARLADRGMTLDTAGFERLEANRKAVQTQTQ--ELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKLKALEQDLAKAQAELDGFLGVIANLPHASVPIGKSADDNAEIRRVGAPRKFDFTAKDHVDLGAGLGQIDFDTAAKLAGARFVVLKSHMARLHRALAQFMLDLHTQEHGYTEVYVPYMVTAECANGVSSLAKFKDDLFKLEGRDLYLIPTAEYPVTNFVRGEILSSESLPLKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIAHPSKSYELLEELTGHAETILKRLELPYRVMTLCTGDMG 981
            MLDIQLLR+DL   A RL  RG   +   F  LEA RK +QT+T+  +                                 D LK ++ +LA  Q  L+ FL +I NLP  SVP G SA+DN E RR G PRKFDF  KDH DLG  LG +DFDTAAKLAGARFVV+K  +ARLHRA+AQFMLD+HT  HGYTEVYVPYMV+ ECANGVSSLAKFKDDLF++EGRDLYLIPT+EYPVTNFVR EI+  ESLPLK+VCH+PCFRSEAG+ GKDTRGMIRQHQFDKVELVQI  P+ S    EELTGHAE ILKRL+LPYRV+TLCTGD G
Sbjct:    1 MLDIQLLRSDLQRTANRLRLRGHEFNVEKFTELEAERKDIQTKTEYFQSQRNAFSKQIGNAKAKGDLELVAGLMADVARFADDLKRMQGELANVQQRLNEFLEIIPNLPQESVPQGSSAEDNVEQRRWGEPRKFDFAVKDHADLGTALGGLDFDTAAKLAGARFVVMKGGIARLHRAIAQFMLDVHTGNHGYTEVYVPYMVSGECANGVSSLAKFKDDLFRVEGRDLYLIPTSEYPVTNFVREEIVPRESLPLKYVCHSPCFRSEAGAAGKDTRGMIRQHQFDKVELVQIVEPANSTAAHEELTGHAEAILKRLDLPYRVVTLCTGDTG 329

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig21254.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig21254.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1F4BNQ7_9PROT	1.210e-144	70.64	Serine--tRNA ligase n=1 Tax=Betaproteobacteria bac...	[more]
A0A1F4D8I8_9PROT	5.420e-142	64.65	Serine--tRNA ligase n=1 Tax=Betaproteobacteria bac...	[more]
A0A1P8FKU6_9PROT	1.710e-141	64.53	Serine--tRNA ligase n=1 Tax=Betaproteobacteria bac...	[more]
A0A6M4H8K0_9PROT	4.440e-140	64.22	Serine--tRNA ligase n=1 Tax=Usitatibacter palustri...	[more]
A0A521W3G2_9PROT	7.250e-139	64.53	Serine--tRNA ligase n=4 Tax=unclassified Betaprote...	[more]
A0A1F3YN13_9PROT	1.560e-138	63.83	Serine--tRNA ligase n=1 Tax=Betaproteobacteria bac...	[more]
A0A7C2YL04_9PROT	9.880e-138	72.12	Serine--tRNA ligase n=1 Tax=Betaproteobacteria bac...	[more]
A0A1F4A764_9PROT	1.560e-136	72.12	Serine--tRNA ligase n=1 Tax=Betaproteobacteria bac...	[more]
A0A838JL68_9BURK	3.890e-136	62.39	Serine--tRNA ligase n=1 Tax=Burkholderiales bacter...	[more]
A0A1F4B2Z9_9PROT	8.640e-136	63.22	Serine--tRNA ligase n=1 Tax=Betaproteobacteria bac...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig21254	contig	P-wetherbeei_contig21254:2..982 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	1
Seed ortholog	1163617.SCD_n01185
Preferred name	serS
PFAMs	Seryl_tRNA_N,tRNA-synt_2b
Model size	981
Max annot lvl	28216\|Betaproteobacteria
KEGG rclass	RC00055,RC00523
KEGG ko	ko:K01875
KEGG Reaction	R03662,R08218
KEGG Pathway	ko00970,map00970
KEGG Module	M00359,M00360
Hectar predicted targeting category	other localisation
Exons	1
Evalue	1.57e-133
EggNOG OGs	COG0172@1\|root,COG0172@2\|Bacteria,1MUJF@1224\|Proteobacteria,2VHJJ@28216\|Betaproteobacteria
EC	6.1.1.11
Description	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
Cds size	981
COG category	J
BRITE	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186220.07292-CDS-P-wetherbeei_contig21254:1..982	1683186220.07292-CDS-P-wetherbeei_contig21254:1..982	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig21254 2..982 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig21254.1.1	prot_P-wetherbeei_contig21254.1.1	Phaeothamnion wetherbeei SAG_119_79	polypeptide	P-wetherbeei_contig21254 2..982 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-wetherbeei_contig21254:2..982-
coding sequence from alignment at P-wetherbeei_contig21254:2..982-

protein sequence of mRNA_P-wetherbeei_contig21254.1.1

>prot_P-wetherbeei_contig21254.1.1 ID=prot_P-wetherbeei_contig21254.1.1|Name=mRNA_P-wetherbeei_contig21254.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=327bp
MLDIQLLRNDLPDVAARLADRGMTLDTAGFERLEANRKAVQTQTQELQAK
RNQLSKQVGQAKAKGEDASALMAEVTAQADKLKALEQDLAKAQAELDGFL
GVIANLPHASVPIGKSADDNAEIRRVGAPRKFDFTAKDHVDLGAGLGQID
FDTAAKLAGARFVVLKSHMARLHRALAQFMLDLHTQEHGYTEVYVPYMVT
AECANGVSSLAKFKDDLFKLEGRDLYLIPTAEYPVTNFVRGEILSSESLP
LKFVCHTPCFRSEAGSYGKDTRGMIRQHQFDKVELVQIAHPSKSYELLEE
LTGHAETILKRLELPYRVMTLCTGDMG

mRNA from alignment at P-wetherbeei_contig21254:2..982-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-wetherbeei_contig21254.1.1 ID=mRNA_P-wetherbeei_contig21254.1.1|Name=mRNA_P-wetherbeei_contig21254.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=981bp|location=Sequence derived from alignment at P-wetherbeei_contig21254:2..982- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGATATTCAATTATTGCGTAATGATCTGCCGGATGTCGCCGCACG
GCTAGCCGACCGCGGCATGACGCTGGATACGGCGGGGTTCGAGCGCCTGG
AGGCCAACCGCAAAGCGGTGCAGACACAGACCCAGGAACTGCAGGCGAAA
CGCAACCAGTTGTCCAAACAGGTGGGCCAGGCCAAGGCCAAGGGCGAAGA
CGCGTCCGCGCTGATGGCCGAGGTGACTGCGCAGGCAGACAAGCTCAAAG
CGCTCGAGCAGGACCTGGCAAAAGCGCAGGCCGAACTCGACGGCTTTCTA
GGGGTCATTGCGAATCTGCCGCACGCCAGCGTACCAATCGGCAAATCGGC
GGACGACAATGCCGAGATTCGACGCGTCGGTGCCCCGCGCAAATTCGATT
TCACCGCGAAAGACCACGTCGATCTCGGCGCGGGTCTTGGGCAGATTGAT
TTCGACACGGCGGCGAAGCTCGCCGGTGCCCGTTTCGTGGTGCTGAAAAG
CCACATGGCGCGCCTGCACCGGGCGCTCGCGCAGTTCATGCTCGACCTGC
ACACCCAGGAGCACGGCTATACCGAGGTCTACGTGCCGTACATGGTGACC
GCGGAGTGTGCCAACGGCGTGTCCAGTCTTGCCAAATTCAAGGACGATTT
GTTTAAGCTTGAAGGACGTGATCTATACCTGATTCCGACGGCCGAATATC
CGGTCACCAACTTCGTGCGTGGCGAAATTCTTTCCAGCGAGTCGCTGCCG
CTGAAATTCGTTTGCCACACGCCGTGTTTTCGCAGCGAGGCCGGTTCTTA
CGGCAAGGATACGCGGGGCATGATCCGCCAGCACCAGTTTGACAAGGTCG
AGCTCGTGCAGATCGCGCATCCGTCAAAGTCTTATGAACTGCTGGAAGAA
CTGACGGGGCATGCCGAGACGATATTGAAGCGCCTGGAGCTGCCGTACCG
GGTGATGACGTTATGCACAGGCGACATGGGA

Coding sequence (CDS) from alignment at P-wetherbeei_contig21254:2..982-

>mRNA_P-wetherbeei_contig21254.1.1 ID=mRNA_P-wetherbeei_contig21254.1.1|Name=mRNA_P-wetherbeei_contig21254.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=981bp|location=Sequence derived from alignment at P-wetherbeei_contig21254:2..982- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGATATTCAATTATTGCGTAATGATCTGCCGGATGTCGCCGCACG
GCTAGCCGACCGCGGCATGACGCTGGATACGGCGGGGTTCGAGCGCCTGG
AGGCCAACCGCAAAGCGGTGCAGACACAGACCCAGGAACTGCAGGCGAAA
CGCAACCAGTTGTCCAAACAGGTGGGCCAGGCCAAGGCCAAGGGCGAAGA
CGCGTCCGCGCTGATGGCCGAGGTGACTGCGCAGGCAGACAAGCTCAAAG
CGCTCGAGCAGGACCTGGCAAAAGCGCAGGCCGAACTCGACGGCTTTCTA
GGGGTCATTGCGAATCTGCCGCACGCCAGCGTACCAATCGGCAAATCGGC
GGACGACAATGCCGAGATTCGACGCGTCGGTGCCCCGCGCAAATTCGATT
TCACCGCGAAAGACCACGTCGATCTCGGCGCGGGTCTTGGGCAGATTGAT
TTCGACACGGCGGCGAAGCTCGCCGGTGCCCGTTTCGTGGTGCTGAAAAG
CCACATGGCGCGCCTGCACCGGGCGCTCGCGCAGTTCATGCTCGACCTGC
ACACCCAGGAGCACGGCTATACCGAGGTCTACGTGCCGTACATGGTGACC
GCGGAGTGTGCCAACGGCGTGTCCAGTCTTGCCAAATTCAAGGACGATTT
GTTTAAGCTTGAAGGACGTGATCTATACCTGATTCCGACGGCCGAATATC
CGGTCACCAACTTCGTGCGTGGCGAAATTCTTTCCAGCGAGTCGCTGCCG
CTGAAATTCGTTTGCCACACGCCGTGTTTTCGCAGCGAGGCCGGTTCTTA
CGGCAAGGATACGCGGGGCATGATCCGCCAGCACCAGTTTGACAAGGTCG
AGCTCGTGCAGATCGCGCATCCGTCAAAGTCTTATGAACTGCTGGAAGAA
CTGACGGGGCATGCCGAGACGATATTGAAGCGCCTGGAGCTGCCGTACCG
GGTGATGACGTTATGCACAGGCGACATGGGA