mRNA_P-wetherbeei_contig21212.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21212.1.1 vs. uniprot
Match: A0A7X7CJN0_9CLOT (Uncharacterized protein n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X7CJN0_9CLOT) HSP 1 Score: 181 bits (460), Expect = 3.430e-52 Identity = 94/273 (34.43%), Postives = 171/273 (62.64%), Query Frame = 1
Query: 1 RSMELSTVIKDYRNLIHPGREIRKNETFNFETANVAFSLLKIIVSELRENYLKLYGYTAKDVMQKVTSDDLSISIFDELIEKLNQSEKVKLFNSIVEFK-----KYLANKRPLLEKIKPYLPEEVIIEKLTNLLHLIETGDSSEVIYYYNLFHSDIGILDDSSINLITKYILSYIKEEGNLGEIQKSVTRQTFTSIGKHIKTEKNEQLFIEVLLDYYMHKEKNRYVYSMYFQMINGLETTKRQEIEVKLDKLKESYFDLTFGNRFFEDDGLPF 804
R LS+V+K+YRNLIHPGRE+R NE F+ ETANV+ SL+++I+ E++ Y+++YGY+AKDV+QK+++D+LSI IF+EL+EKLN +E++KL N++++ + L N + ++ +KP++ ++ +I+ L L +ETG+ E++ LF D+ +L++ +LI KY +S + L E+ + F ++ K +++ + + E+L DYY + + V +Y+Q++NG ++++E + + + F N ++ LPF
Sbjct: 44 RIKSLSSVVKNYRNLIHPGRELRLNEQFDKETANVSVSLVRLILKEIKTKYVEIYGYSAKDVIQKISNDNLSIGIFEELVEKLNYNERLKLLNNLIDIELSTDFHSLENPKQYVDILKPFINKDDLIKHLLTLHKKVETGERWEILSLLKLFKEDLNLLEEGKRDLIIKYSISVLNNTKRLTEVDNLRISRVFNTLPKIVESSGLIEEYKEMLNDYYWGTKNHSNVQYLYYQLMNGFSKEVKEDLEANFEINEPFLSETRFENDI--EESLPF 314
BLAST of mRNA_P-wetherbeei_contig21212.1.1 vs. uniprot
Match: A0A2N2WIF8_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium HGW-Bacteroidetes-6 TaxID=2013696 RepID=A0A2N2WIF8_9BACT) HSP 1 Score: 145 bits (367), Expect = 9.980e-38 Identity = 87/262 (33.21%), Postives = 148/262 (56.49%), Query Frame = 1
Query: 1 RSMELSTVIKDYRNLIHPGREIRKNETFNFETANVAFSLLKIIVSELRENYLKLYGYTAKDVMQKVTSDDLSISIFDELIEKLNQSEKVKLFNSIVEF--------------KKYLANK-------RPLLEKIKPYLPEEVIIEKLTNLLHLIETGDSSEVIYYYNLFHSDIGILDDSSINLITKYILSY-IKEEGNLGEIQKSVTRQTFTSIGKHIKTEKNEQLFIEVLLDYYMHKEKNRYVYSMYFQMINGLETTKRQEI 720
+ L+TV+KDYRNLIHPG+EIRK E FN E+A +A ++ II++ ++ Y+ YG+TA+++++++ D S+FD+++ KLNQ+EK KL +V+F K + N+ +PL ++KP LP +VI L L+ +ETG + YNLFH +IG L LI Y+L + I N +I +T+++IGK+++++K + + + DY ++ + ++ +INGL+ R E+
Sbjct: 84 KEKNLATVVKDYRNLIHPGKEIRKEEKFNSESAIIAAKVVDIILNSVKSVYISKYGHTAEEILERLKHDWHYQSVFDKVVIKLNQNEKEKLLQLLVDFDVWEKSHWDSFSYGNKPIRNEYYDLEFVKPLTNQLKPLLPNDVIKNYLKQLIKELETGSKEKAYCLYNLFHDNIGELSPDEQELIVIYMLGFAISLLENTSDI---ALEKTYSTIGKYVQSDKTKAALKKFIQDYSVNSSGSEKDLDLFEHVINGLKVELRTEM 342
BLAST of mRNA_P-wetherbeei_contig21212.1.1 vs. uniprot
Match: UPI001EFA74DF (DUF4145 domain-containing protein n=1 Tax=Tenacibaculum dicentrarchi TaxID=669041 RepID=UPI001EFA74DF) HSP 1 Score: 145 bits (365), Expect = 1.920e-37 Identity = 90/290 (31.03%), Postives = 155/290 (53.45%), Query Frame = 1
Query: 1 RSMELSTVIKDYRNLIHPGREIRKNETFNFETANVAFSLLKIIVSELRENYLKLYGYTAKDVMQKVTSDDLSISIFDELIEKLNQSEKVKLFNSIVEFKKYLANK---------------------RPLLEKIKPYLPEEVIIEKLTNLLHLIETGDSSEVIYYYNLFHSDIGILDDSSINLITKYILSYIKEEGNLGEIQKSVTRQTFTSIGKHIKTEKNEQL---FIEVLLDYYMHKEKNRYVYSMYFQMINGLETTKRQEIEVKLDKLKESYFDLTFGNRFFEDDGL 798
+ L+ V+KDYRNLIHPGREIRK E F+F++A ++ S+L IIV ++ YL+ YGY+A +V +K+ D SIFD++I KLNQ+E+ KL +++F K+ +K +P + K+KP + ++I L ++ IETG+S ++LFH ++ ++ + ++ Y+L+ L E + + +TF++IGK+IKT+K++ FI+ ++ HK + + Q+ N L + + E L +L + F D+ L
Sbjct: 84 KEKNLAGVVKDYRNLIHPGREIRKGEKFDFDSAKISESVLNIIVDSVKTVYLEKYGYSADEVFEKLKKDWHFQSIFDKVILKLNQNERSKLLGYLIDFDKWEKSKWECFMQEGPMEEYEVYDLEDVKPFILKLKPLVSSDLIKSNLAKMIKEIETGESINAYSLFHLFHENMDLMSEDEQEIVVIYMLNIYTTV--LDENKNVIADKTFSTIGKYIKTDKSKNALKDFIDFCAVHFSHKRIKSEM-DLLEQVFNSLSADVKTQAETHLTSFLSPIENLPPNIKIFYDEAL 370
BLAST of mRNA_P-wetherbeei_contig21212.1.1 vs. uniprot
Match: A0A1H6XMR4_9BACT (Uncharacterized protein n=1 Tax=Dyadobacter sp. SG02 TaxID=1855291 RepID=A0A1H6XMR4_9BACT) HSP 1 Score: 140 bits (352), Expect = 1.200e-35 Identity = 91/288 (31.60%), Postives = 160/288 (55.56%), Query Frame = 1
Query: 1 RSMELSTVIKDYRNLIHPGREIRKNETFNFETANVAFSLLKIIVSELRENYLKLYGYTAKDVMQKVTSDDLSISIFDELIEKLNQSEKVKLFNSIVEFK-------KYLA-NKRPLLEKIKPYLPEEVIIEKLTNLLHLIETGDSSEVIYYYNLFHSDIGILDDSSINLITKYILSYIKEEGNLGE-IQKSVTRQTFTSIGK---HIKTEKNEQLFIEVLLDYYMHKEKNRYVYSMYFQMINGLETTKRQEIEVKLDKLKESYFDLTFGNRFFED--------DGLPF 804
RS +L +V++ YRNLIHPGRE+R+NE F+ ETA V+ SL+ II +E+R + +G++A D++ K+ D+ S +F EL+ +L+Q EK KL+ + E++ + LA N R L+ ++KP+L E I+E++ L+ + G+S +++ Y L++SD+ +L D + Y+L+YI N+ + KS F S+ ++K+E+ F +++ + + + S+Y +++ L + EIE L ++ L F+ED D LPF
Sbjct: 87 RSKDLLSVLRGYRNLIHPGRELRENEKFDIETAKVSVSLIVIISNEIRNYLIDKFGFSASDIIGKLERDETSAELFRELLMRLSQREKHKLYYLLKEYRPGRKAIQRTLADNTRSLIYQLKPFLTTEFILEQVKGLVEKVHIGESVDILVLYRLWYSDLRLLSDRDRETVVLYVLNYINY--NISSWLDKSEYYHEFDSLSTASYYVKSERTVAEFKQLITTLILLHDGRPRIVSLYSNLVDKLSEDTKIEIERSL----QTGIPLGIAGGFWEDLVKFREEYDDLPF 368
BLAST of mRNA_P-wetherbeei_contig21212.1.1 vs. uniprot
Match: UPI0016235F40 (hypothetical protein n=1 Tax=Sphingobacterium mizutaii TaxID=1010 RepID=UPI0016235F40) HSP 1 Score: 135 bits (339), Expect = 5.850e-34 Identity = 77/227 (33.92%), Postives = 120/227 (52.86%), Query Frame = 1
Query: 1 RSMELSTVIKDYRNLIHPGREIRKNETFNFETANVAFSLLKIIVSELRENYLKLYGYTAKDVMQKVTSDDLSISIFDELIEKLNQSEKVKLFNSIVEFKKY---------------------LANKRPLLEKIKPYLPEEVIIEKLTNLLHLIETGDSSEVIYYYNLFHSDIGILDDSSINLITKYILSYIKEEGNLGEIQKSVTRQTFTSIGKHIKTEKNEQLFIE 618
R L+ VIKDYRNLIHPGRE+RK E F+ E A ++ +L+ II + Y YGY A D++QK+ D ++F+++I KLNQ+E+V+L ++E + Y L + + IKP +P EVII L ++H IETGD ++ +NLFH ++ L + ++ YI S L + +TF++IG HI + + ++ E
Sbjct: 48 REKNLAWVIKDYRNLIHPGREVRKAEKFSIEDAEISVALVGIIAKAIENKYKLNYGYLADDIIQKLKYDWQFQAVFEKVILKLNQTERVRLLALLIETEIYEKSFWDNFLGEGYIPEKESSNLEATKEFVMAIKPLVPHEVIIHHLKQMVHEIETGDQTKAFALFNLFHEELNYLSKDEVGMVVAYIFSLFSSV--LENCSDLINERTFSTIGNHIASARTQKALKE 272
BLAST of mRNA_P-wetherbeei_contig21212.1.1 vs. uniprot
Match: A0A0E9N1K1_9BACT (Uncharacterized protein n=1 Tax=Flavihumibacter petaseus NBRC 106054 TaxID=1220578 RepID=A0A0E9N1K1_9BACT) HSP 1 Score: 129 bits (324), Expect = 1.690e-31 Identity = 76/220 (34.55%), Postives = 128/220 (58.18%), Query Frame = 1
Query: 13 LSTVIKDYRNLIHPGREIRKNETFNFETANVAFSLLKIIVSELRENYLKLYGYTAKDVMQKVTSDDLSISIFDELIEKLNQSEKVKLFNSIVEFK-----KYL--------ANKRPLLE-------KIKPYLPEEVIIEKLTNLLHLIETGDSSEVIYYYNLFHSDIGILDDSSINLITKYILSYIKEEGNLGEIQKSVTR-QTFTSIGKHIKTEKNEQL 609
L+TVIKDYRNLIHPGRE+RKNE F+FETA +AF +L +++ +++ Y + + YTA+D++ + D SI+ +I +L+ EK L ++ V+ + K++ A K P + ++KP L +E I L L+ + +G S + + YNLFH D+ +L + ++ Y+ S + GN+ E + + +TF++IGK+ K +K +QL
Sbjct: 88 LATVIKDYRNLIHPGREVRKNEQFDFETAQLAFQILNLLIRKIQRKYREKFAYTAEDILNSLNEDWNYNSIYSTVITRLSTGEKNNLIDAFVDIENKEKSKFIHYEGKFEYAEKYPEISDVKGYVIELKPLLRQETIKSYLKELIISVTSGHSLQAVSLYNLFHEDLHLLSEDDQFMVVTYMFSLL---GNILENYRELAADKTFSTIGKYAKGDKGKQL 304
BLAST of mRNA_P-wetherbeei_contig21212.1.1 vs. uniprot
Match: A0A2Z4LRE9_9FLAO (Uncharacterized protein n=1 Tax=Muricauda aurantiaca TaxID=1383885 RepID=A0A2Z4LRE9_9FLAO) HSP 1 Score: 128 bits (322), Expect = 3.950e-31 Identity = 71/227 (31.28%), Postives = 129/227 (56.83%), Query Frame = 1
Query: 1 RSMELSTVIKDYRNLIHPGREIRKNETFNFETANVAFSLLKIIVSELRENYLKLYGYTAKDVMQKVTSDDLSISIFDELIEKLNQSEKVKLFNSIVEFKKYLANK-------------------------RPLLEKIKPYLPEEVIIEKLTNLLHLIETGDSSEVIYYYNLFHSDIGILDDSSINLITKYILSYIKEEGNLGEIQKSVTRQTFTSIGKHIKTEKNEQ 606
+ +L+ +IKDYRNLIHPG+E+R E F+FETA +A LL II+ +LR N+ YGY+A + ++K+ +D S++ +I KL+++E+ KL +++ ++ + + +P ++++KP L ++I ++L L + G+S +V+ YNLFH +IG LD +I Y+LS E + + +T+++IGK+I T++ ++
Sbjct: 84 KEKQLAVIIKDYRNLIHPGKEVRTKEEFDFETAKLAKILLDIILKKLRTNHFDKYGYSANETLEKLKNDWEFQSVYGMVITKLHKNEREKLLTELIKIEQTIKSNFEHYKLMSDYDPKSEISELGNLEEIKPRIQELKPLLSNDIITDQLAELKDAVIRGESIKVLSLYNLFHEEIGQLDKDDQEMIAIYMLSLY--ESIFEDSRDLANDKTYSTIGKYIHTKRGKE 308
BLAST of mRNA_P-wetherbeei_contig21212.1.1 vs. uniprot
Match: UPI0004932160 (hypothetical protein n=1 Tax=Pedobacter borealis TaxID=475254 RepID=UPI0004932160) HSP 1 Score: 95.1 bits (235), Expect = 5.740e-19 Identity = 72/267 (26.97%), Postives = 129/267 (48.31%), Query Frame = 1
Query: 16 STVIKDYRNLIHPGREIRKNETFNFETANVAFSLLKIIVSELRENYLKLYGYTAKDVMQKVTSDDLSISIFDELIEKLNQSEKVKLFNSIVEFKKYLANKRPLL--------EKIKPYLPEEVIIEKLTNLLHLIETGDSSEVIYYYNLFHSDIG-ILDDSSINLITKYILSYIKEEGNLGEIQKSVTRQTFTSIGKHIKTEKNEQL-----FIEVLLDYYMHKEKNRYVYSMYFQMINGL-------ETTKRQEIEVKLDKLKESY 753
S+ I+ YRNLIHPGRE+R E F+++TA+++FS LK+I+ E+ L G +A ++ K+T+D L +F ++ KLN++EK KLF +++ L N+ P L E + + + ++ L+ IE+G + I Y + + L+ + ++ +++L+ I + E+ I ++T+KN + + L YY KN +Y + I+G E K+ E + D L + Y
Sbjct: 89 SSGIQGYRNLIHPGREVRLKEKFDYDTASLSFSALKLILKEIEIKSLSEKGRSASEIFNKLTNDGLPDGLFIKITNKLNKTEKNKLFQTLISDD--LGNRGPQLVQGASKYAELLSSSMDSNIFLQLTKELMQEIESGSEVKAIKYIRYLYQRLSEYLEIQDLEIVKEWLLTQINSR--IAEVNDLRFLMFNNVIDALLRTDKNIAMSPKLKLLAQRLTYYYSYNKNSIIYLDIWTKIHGFLDADAYSELLKQMENYSQFDVLIKDY 351
BLAST of mRNA_P-wetherbeei_contig21212.1.1 vs. uniprot
Match: A0A090QDU9_NONUL (Uncharacterized protein n=1 Tax=Nonlabens ulvanivorans TaxID=906888 RepID=A0A090QDU9_NONUL) HSP 1 Score: 91.3 bits (225), Expect = 1.530e-17 Identity = 56/175 (32.00%), Postives = 92/175 (52.57%), Query Frame = 1
Query: 10 ELSTVIKDYRNLIHPGREIRKNETFNFETANVAFSLLKIIVSELRENYLKLYGYTAKDVMQKVTSDDLSISIFDELIEKLNQSEKVKLFNSIVEFKKYLANK------RPLL----EKIKPYLPEEVIIEKLTNLLHLIETGDSSEVIYYYNLFHSDIGILDDSSINLITKYILS 504
+LSTVI++YRN +HP +E+R N + A +A L+ +++S ++EN+ KLYG A+DV K+ SD S I + L++K+NQ+E L+ + F YL + R + EK++ ++ E +I + + I G + + LF + SIN I YI S
Sbjct: 89 DLSTVIREYRNYVHPNKELRSKSDINEDKAVIACRLVNMVISSVKENHPKLYGNKAEDVFSKLHSDSHSRKILNYLLDKMNQNEIDLLYQKFISF--YLLSDSINYSDRNFVYFGKEKLEEFVSESIIKSYVFKIEQEITNGSKEQAERLFELFGDKLNYYSQDSINTILIYIYS 261
BLAST of mRNA_P-wetherbeei_contig21212.1.1 vs. uniprot
Match: UPI001FD4E533 (hypothetical protein n=1 Tax=Chitinophaga sp. R8 TaxID=2920382 RepID=UPI001FD4E533) HSP 1 Score: 87.8 bits (216), Expect = 2.990e-17 Identity = 39/96 (40.62%), Postives = 64/96 (66.67%), Query Frame = 1
Query: 1 RSMELSTVIKDYRNLIHPGREIRKNETFNFETANVAFSLLKIIVSELRENYLKLYGYTAKDVMQKVTSDDLSISIFDELIEKLNQSEKVKLFNSIV 288
R L+ VIKDYRNL+HPG+E+RK E F+ E A ++ SL+ I+ + + + Y YGY A +++ K+ D S+F ++ K+NQ+E++KL + +V
Sbjct: 84 RQKNLAWVIKDYRNLVHPGKEVRKAEKFSMEDAEISISLVGIVTNAIEDKYSATYGYKANEILNKLRMDWQYRSVFSKVAMKMNQTERIKLLDKLV 179 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21212.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21212.1.1 >prot_P-wetherbeei_contig21212.1.1 ID=prot_P-wetherbeei_contig21212.1.1|Name=mRNA_P-wetherbeei_contig21212.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=267bp MELSTVIKDYRNLIHPGREIRKNETFNFETANVAFSLLKIIVSELRENYLback to top mRNA from alignment at P-wetherbeei_contig21212:2..808+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21212.1.1 ID=mRNA_P-wetherbeei_contig21212.1.1|Name=mRNA_P-wetherbeei_contig21212.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig21212:2..808+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21212:2..808+ >mRNA_P-wetherbeei_contig21212.1.1 ID=mRNA_P-wetherbeei_contig21212.1.1|Name=mRNA_P-wetherbeei_contig21212.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig21212:2..808+ (Phaeothamnion wetherbeei SAG_119_79)back to top |