mRNA_P-wetherbeei_contig21135.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: A0A7C3NZ64_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3NZ64_9PROT) HSP 1 Score: 390 bits (1001), Expect = 2.470e-133 Identity = 194/298 (65.10%), Postives = 238/298 (79.87%), Query Frame = 1
Query: 46 AQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIK 939
A +P RPVRI++GFTPGG+PDITARLI QKL+ETWKQ V V+NR GAGG IAAQ VA + PDGYTLLS+S+AH A AIY KLP+D KDFAG+TMTATGP LL+V+P L VKT DL+ALAKA+PG N+SSAG+GSGTHFA E K+ A IDVVH+PFKGIPEA+ E + GRVQFF++P A+AIGLVKDG+A AI V S +RV + PN+PTVAESG+PG+++ W G+LAPAKTPR L+ +LN E+ R+L P+ RL+ LG E AP TP FD+ IA+++A TR+ARAANIK
Sbjct: 9 AAGYPARPVRIVIGFTPGGVPDITARLIAQKLTETWKQQVIVDNRTGAGGTIAAQIVANSNPDGYTLLSVSNAHAVAAAIYTKLPYDTLKDFAGVTMTATGPALLLVSPALGVKTAKDLIALAKARPGQFNFSSAGVGSGTHFAGELFKSMAEIDVVHIPFKGIPEAITETLTGRVQFFLSPLASAIGLVKDGKALAIGVASAQRVPQLPNLPTVAESGLPGFRFEFWYGMLAPAKTPRPLVGRLNREITRVLGHPDVHNRLSGLGAEPAPSTPQAFDKFIADDIATLTRVARAANIK 306
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: UPI00155F22AC (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Polynucleobacter sinensis TaxID=1743157 RepID=UPI00155F22AC) HSP 1 Score: 367 bits (941), Expect = 8.130e-124 Identity = 175/300 (58.33%), Postives = 238/300 (79.33%), Query Frame = 1
Query: 46 AQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
AQ +P++P++I+VGF+PGG+PDI AR+IGQ +SE+WKQPV VEN+PGAG NIAAQ VA AP DGYTLLSISSA +P+IY LPFD +DF+G+T+TATGP L+++P+L V TV +L+ A PG + YSSAG+GSG+HFA E ++A+AG++++H+P KGIP+ + E ++GRV FF++P+A+A+ LV+ G+ RAIAVTS KRV E P +PTVAESG+PGYK+ W GLLAP KTP+ +++++ AEV RIL LPE +R A LGT A TPD+FD++IA E+ F+RLA+A+ IK E
Sbjct: 36 AQTYPSQPIKIVVGFSPGGVPDIAARVIGQHMSESWKQPVLVENKPGAGSNIAAQIVAGAPADGYTLLSISSAFAISPSIYSTLPFDPLRDFSGVTLTATGPAFLLISPNLKVNTVKELLEFAAKNPGKVTYSSAGVGSGSHFAAELIQAKAGVELLHIPTKGIPDGITEVMSGRVDFFISPYASAVNLVRAGKVRAIAVTSTKRVKEFPALPTVAESGIPGYKWEFWYGLLAPGKTPKPILQKIYAEVKRILELPEVKERFAELGTVAVSSTPDQFDKMIAAEITEFSRLAKASGIKPE 335
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: UPI001BFCE04A (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Polynucleobacter sp. MWH-Aus1W21 TaxID=1855880 RepID=UPI001BFCE04A) HSP 1 Score: 358 bits (920), Expect = 8.600e-121 Identity = 173/301 (57.48%), Postives = 236/301 (78.41%), Query Frame = 1
Query: 43 TAQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
+AQ++PT+P++I+VGF+PGG+PDI AR+IGQ +SE WKQPV VEN+ GAG NIAAQ VA AP DGYTLLSISSA +PAIY + FD KDF+GIT+TATGP L++++P+L V T+ +L+ A PG + YSSAG+GSG+HFA E ++A+AG++++H+P KGIP+A+ E ++GRV FF++P+A+AI LVK G+ RAIA+TS KR + PN+PTV+ESGVPGYK+ W GL+APAKTP+ +++++ +EV RIL LP +R LGT A TPD+FD+LIA E+ F RLA+ + IK E
Sbjct: 24 SAQSYPTQPIKIVVGFSPGGVPDIAARIIGQHMSENWKQPVVVENKLGAGSNIAAQLVANAPSDGYTLLSISSAFAISPAIYSSMAFDPIKDFSGITLTATGPALVLISPNLKVNTMKELLEYATKYPGKVTYSSAGVGSGSHFAAELIQAKAGVELLHIPTKGIPDAITEVMSGRVDFFISPYASAINLVKSGKVRAIAITSTKRFKDLPNLPTVSESGVPGYKWEFWYGLVAPAKTPKPILQKIASEVKRILELPSVKERFDELGTTAVSSTPDQFDKLIAAEIIEFARLAKLSGIKPE 324
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: UPI001C0C19AE (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Polynucleobacter sp. Latsch14-2 TaxID=2576920 RepID=UPI001C0C19AE) HSP 1 Score: 358 bits (919), Expect = 1.140e-120 Identity = 178/309 (57.61%), Postives = 236/309 (76.38%), Query Frame = 1
Query: 19 LAALPRMGTAQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
L LP +AQ +PT+P++I+VGF+PGG+PDI AR+IGQ +SE WKQPV VEN+ GAG NIAAQ VA AP DGYTLLSISSA +PAIY + FD KDF+G+T+TATGP L+V+P+L V +V +L+ A PG + YSSAG+GSG+HFA E ++A+AGI ++H+P KGIP+A+ E ++GRV FF++P+A+AI LV+ G+ RAIAVTS KR+ + P++PTVAESGVPGYK+ W GLLAPAKTP+ +++++ AEV RIL LP +R LGT A TP++FD LIA E+ F RLA+ + IK E
Sbjct: 14 LCLLPLSLSAQTYPTQPIKIVVGFSPGGVPDIAARIIGQHMSEHWKQPVLVENKLGAGSNIAAQVVANAPSDGYTLLSISSAFAISPAIYSSMSFDPLKDFSGVTLTATGPAFLLVSPNLKVNSVKELIDYAAKNPGKVTYSSAGVGSGSHFAAELIQAKAGISLLHIPTKGIPDAITEVMSGRVDFFISPYASAISLVRAGKVRAIAVTSTKRIKDFPSLPTVAESGVPGYKWEFWYGLLAPAKTPKPILQKIYAEVKRILELPSVKERFDELGTTAVSSTPEQFDALIAAEILEFARLAKVSGIKPE 322
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: A0A2T7SUP8_9BURK (Uncharacterized protein n=2 Tax=Limnohabitans sp. Rim28 TaxID=1100720 RepID=A0A2T7SUP8_9BURK) HSP 1 Score: 355 bits (911), Expect = 1.940e-118 Identity = 172/300 (57.33%), Postives = 233/300 (77.67%), Query Frame = 1
Query: 46 AQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
A +P +P++I+VGF+PGG+PDI R++ K +ETWKQPV VENR GAG NIAAQA+A++ DGYTLLS+SSAH +PAIY KLP+D +KDFAGIT+TATGP L+IV+P+L V + +L+ALAK+KPG NYSSAG+GSG+ FA E LK+QAGI + H+PFKGIPEAL + +AGR F++P+A+AI LV++G+A+AIAVTS R+ + PN+PTVAESG+PGYK+ W GL+APA TP+ +I+++ AEVV L+ P QR + LG E +P+ FD+L+ +E+ F +LA A IK +
Sbjct: 93 ATNYPQKPIKILVGFSPGGVPDIIGRVLAPKFTETWKQPVVVENRVGAGSNIAAQALASSAADGYTLLSVSSAHAISPAIYQKLPYDASKDFAGITLTATGPALVIVSPELNVNNMRELIALAKSKPGQFNYSSAGVGSGSQFAAELLKSQAGIQLTHIPFKGIPEALTDTMAGRTHIFISPYASAINLVREGKAKAIAVTSTSRMPDLPNMPTVAESGLPGYKWIFWYGLMAPANTPKDIIQKVQAEVVSALKQPLVTQRFSSLGIEPITNSPEAFDQLVRDEIQLFKKLASDAGIKAD 392
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: A0A537CW66_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537CW66_9PROT) HSP 1 Score: 352 bits (902), Expect = 6.960e-118 Identity = 187/316 (59.18%), Postives = 228/316 (72.15%), Query Frame = 1
Query: 1 LLAATGLAALPRMGTAQA-FPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
L+A AA AQA +P RPV+IMVGFTPGG PDITAR + QKLSE+W Q V VENRPGAGG +AA VA A PDGYTLLS+SSAH +A AIYPKLP+D + AGIT T + +L+V P L VK++ +L+ AKAKPG N+SSAG+GSGTHFA E KA A IDVVHVPFKGIPEALAE VAGRVQFFMAP A ++ VKDGR + V+S +R P +PTV E+GV GY+ +W GLL + PRA+I +LN ++VRIL P+T R P+G E P P+ FDR+I EE+A F+R+ARAA+IK E
Sbjct: 21 LMAGLAFAAAAGPSRAQADYPNRPVKIMVGFTPGGGPDITARHVAQKLSESWGQQVIVENRPGAGGTLAAAQVARAAPDGYTLLSVSSAHAAAAAIYPKLPYDTVGELAGITQTGSSKYVLVVPPSLGVKSLRELLDTAKAKPGQFNFSSAGVGSGTHFAAEIFKAMAAIDVVHVPFKGIPEALAETVAGRVQFFMAPIANSVNYVKDGRLLGLGVSSLQRDPLLPEVPTVDEAGVAGYQSELWFGLLTASGVPRAIIAKLNRDIVRILGEPDTRSRWGPIGIEPRPSAPEGFDRMIREEIALFSRIARAASIKAE 336
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: UPI001C0C494B (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Polynucleobacter sp. UK-Mo-2m-Kol15 TaxID=2576916 RepID=UPI001C0C494B) HSP 1 Score: 351 bits (900), Expect = 9.320e-118 Identity = 172/300 (57.33%), Postives = 230/300 (76.67%), Query Frame = 1
Query: 46 AQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
AQ+FPT+P++I+VGF+PGG+PDI AR+IGQ++SE WKQPV VEN+ GAG NIAAQ VA AP DGYTLLSISSA +PAIY L FD KDF+G+T+TATGP L++V+P++ V T+ +L+ A PG + YSSAGIGSG+HFA E ++A+ +++H+P KGIP+A+ E ++GRV FF++P+A+AI LVK G+ RAIA+TS KR + P +PTVAESGVPGYK+ W GL+APAKTP+A+++++ EV RIL LP R LGT A TP++FD+ IA E+ F RLA+ + IK E
Sbjct: 25 AQSFPTQPIKIIVGFSPGGVPDIAARVIGQQMSENWKQPVVVENKLGAGSNIAAQFVANAPSDGYTLLSISSAFAISPAIYSTLAFDPIKDFSGVTLTATGPALVLVSPNIKVNTMKELIDYAAKNPGKVTYSSAGIGSGSHFAAELIQAKTNTELLHIPTKGIPDAITEVMSGRVDFFISPYASAINLVKAGKVRAIAITSTKRFKDLPTLPTVAESGVPGYKWEFWYGLMAPAKTPKAILQKIALEVKRILELPNIKDRFDELGTTAVSSTPEQFDKFIAAEIIDFARLAKQSGIKPE 324
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: A0A1W1Y6Y4_9BURK (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Polynucleobacter sp. VK13 TaxID=1938817 RepID=A0A1W1Y6Y4_9BURK) HSP 1 Score: 346 bits (888), Expect = 6.380e-116 Identity = 171/300 (57.00%), Postives = 232/300 (77.33%), Query Frame = 1
Query: 46 AQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
AQA+P +P++I+VGF+PGG PDITAR++GQK SE W Q V VEN+ GAG NIA+Q VA + PDGYTLLS+S+A + +PAIYPKLPFD KDF G+T+TATGP LLI++P L V TVA+L+ALAK PG + YSSAG+GSG+HFA E L+A+AG+D++H+P KGIP+ L E ++GRV FF++P+A+AI +VKDG+A+AIA+TS KR E ++PT+AE+ VPGY++ W GLLAPA TP+ +++Q+ AEV RI LP+ +R A +G E TP +FD + E+ FT +A++A I E
Sbjct: 27 AQAYPNKPIKIVVGFSPGGGPDITARVLGQKFSEKWNQSVVVENKVGAGANIASQFVANSKPDGYTLLSVSNAFSISPAIYPKLPFDAMKDFDGVTLTATGPALLIISPKLKVTTVAELIALAKKNPGQMTYSSAGVGSGSHFAAEILRAKAGLDLLHIPTKGIPDGLTEVISGRVDFFISPYASAIAMVKDGKAKAIAITSLKRNKEYLDLPTIAET-VPGYQWQFWYGLLAPAGTPKEILQQIAAEVKRINDLPDVKERYANIGIEPISDTPTQFDTFVQTEIKEFTAIAKSAKIMAE 325
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: UPI000D3E7F43 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Polynucleobacter rarus TaxID=556055 RepID=UPI000D3E7F43) HSP 1 Score: 346 bits (887), Expect = 9.040e-116 Identity = 181/322 (56.21%), Postives = 241/322 (74.84%), Query Frame = 1
Query: 1 LLAATGLAALPRMGT-------AQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
+L TG+ AL GT AQA+P +PV+I+VGF+PGG PDITAR++GQK SE W Q V +EN+ GAG NIA+Q VA + PDGYTLLS+S+A + +PAIYPKLPFD KDF GIT+TATGP LLI++P L V +VA+LVA+AK PG + YSSAGIGSG+HFA E L+++AG++++H+P KGIPE L E ++GRV FF++P+A+AI +VKDGRA+AIA+TS KR E ++PTVAE+ VPGY++ W GLLAPA TP+ +++Q+ EV RI LPE +R A +G E A TP +FD + E+ F+ +A+AA I E
Sbjct: 8 MLVVTGIIAL---GTVLQFDVRAQAYPNKPVKIVVGFSPGGGPDITARVLGQKFSEKWNQSVVIENKVGAGANIASQFVANSKPDGYTLLSVSNAFSISPAIYPKLPFDAMKDFDGITLTATGPALLIISPKLKVTSVAELVAMAKKNPGQMTYSSAGIGSGSHFAAEILRSKAGLELLHIPTKGIPEGLTEVMSGRVDFFISPYASAIAMVKDGRAKAIAITSLKRSKEMADMPTVAET-VPGYQWQFWYGLLAPAGTPKDILQQIALEVKRINELPELKERYASIGIEPASDTPAQFDIFVQNEIKDFSAIAKAAKIIAE 325
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: A0A3N5W8H2_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5W8H2_9PROT) HSP 1 Score: 345 bits (884), Expect = 2.850e-115 Identity = 174/297 (58.59%), Postives = 223/297 (75.08%), Query Frame = 1
Query: 49 QAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIK 939
+ +PT+P+RI+VGFTPGG PDITAR I QKL+E ++Q V V+NRPGAGG IAA A A PDGYTLLS+SSAH APAIY KLP+D +D AGI+++A +L+ AP + + DL+A A+ KPG LN+SSAG GSGTHFA E LK+ A IDVVH+PFKGIPEAL E++ GRVQFFM+P A A+GLV++G+ + V+S KR PN+PT+AE+GVPGY +W G+L ++TPR LI LN EV RIL E +R AP+G E +P TP +FD++IAE++A FTRLA+A NIK
Sbjct: 30 REYPTKPIRILVGFTPGGGPDITARYIAQKLTEEFQQTVVVDNRPGAGGTIAANLTATANPDGYTLLSVSSAHAVAPAIYDKLPYDAQRDLAGISLSAVSKYVLVAAPSTGYRNLNDLLAAARTKPGQLNFSSAGTGSGTHFAGELLKSMAKIDVVHIPFKGIPEALTESLTGRVQFFMSPIANAVGLVREGKLLGLGVSSLKRDALLPNVPTIAEAGVPGYDSILWFGMLTSSRTPRPLINVLNREVTRILGDAEVRKRWAPIGLEPSPTTPAQFDKIIAEDIATFTRLAKAGNIK 326 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21135.1.1 >prot_P-wetherbeei_contig21135.1.1 ID=prot_P-wetherbeei_contig21135.1.1|Name=mRNA_P-wetherbeei_contig21135.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=316bp LLAATGLAALPRMGTAQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETback to top mRNA from alignment at P-wetherbeei_contig21135:196..1143+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21135.1.1 ID=mRNA_P-wetherbeei_contig21135.1.1|Name=mRNA_P-wetherbeei_contig21135.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=948bp|location=Sequence derived from alignment at P-wetherbeei_contig21135:196..1143+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21135:196..1143+ >mRNA_P-wetherbeei_contig21135.1.1 ID=mRNA_P-wetherbeei_contig21135.1.1|Name=mRNA_P-wetherbeei_contig21135.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=948bp|location=Sequence derived from alignment at P-wetherbeei_contig21135:196..1143+ (Phaeothamnion wetherbeei SAG_119_79)back to top |