mRNA_P-wetherbeei_contig2113.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2113.1.1
Unique NamemRNA_P-wetherbeei_contig2113.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig2113.1.1 vs. uniprot
Match: A0A835YLJ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLJ6_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.720e-12
Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 1 
Query:   16 TEVMAALCENLQPSPYPFGTMALRLLGRLGGCNRRFLGESMPVP 147
            T++MAALC NL+P PYPFGT+ALRL+G+LGG NR FL E+M +P
Sbjct:  283 TDIMAALCSNLRPPPYPFGTIALRLVGKLGGRNRHFLPEAMALP 326
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BLAST of mRNA_P-wetherbeei_contig2113.1.1 vs. uniprot
Match: D8LFI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 2.070e-12
Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 1 
Query:    1 DMRTCTEVMAALCENLQPSPYPFGTMALRLLGRLGGCNRRFLGESMPVPPTEG 159
            D +   +VM ALC NL+P+P+ +GT+ALRLLG+LGG NRRFL E M +PP+ G
Sbjct:  998 DPKVLADVMTALCANLRPAPFHYGTIALRLLGKLGGRNRRFLSEPMLLPPSTG 1050
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BLAST of mRNA_P-wetherbeei_contig2113.1.1 vs. uniprot
Match: A0A7R9U8N6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8N6_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 4.190e-10
Identity = 27/48 (56.25%), Postives = 38/48 (79.17%), Query Frame = 1 
Query:    1 DMRTCTEVMAALCENLQPSPYPFGTMALRLLGRLGGCNRRFLGESMPV 144
            D +  TEVM ++  +L+P+PYP+G +ALRLLG+LGG NRRFLG S+ +
Sbjct:  840 DEKLLTEVMLSIASHLRPAPYPYGMLALRLLGKLGGKNRRFLGRSLAL 887
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BLAST of mRNA_P-wetherbeei_contig2113.1.1 vs. uniprot
Match: A0A7S2EPR7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EPR7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 9.460e-9
Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 1 
Query:   16 TEVMAALCENLQPSPYPFGTMALRLLGRLGGCNRRFLGESMPV 144
            TE+M +L  +L P+PYP+G + LRLLG+LGG NRRFL E+M +
Sbjct:   97 TELMVSLTNHLHPAPYPYGLLTLRLLGKLGGRNRRFLQEAMDI 139
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BLAST of mRNA_P-wetherbeei_contig2113.1.1 vs. uniprot
Match: A0A4D9D5Q9_9STRA (FAT domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5Q9_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.790e-8
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 1 
Query:   16 TEVMAALCENLQPSPYPFGTMALRLLGRLGGCNRRFLGESMPVPPT 153
            +++ AALCE+L+P PYP+G +A RLLG+LGG NR FL E  P  P+
Sbjct:  759 SDLFAALCEHLRPQPYPYGHLAARLLGKLGGRNRSFLKEVPPPLPS 804
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BLAST of mRNA_P-wetherbeei_contig2113.1.1 vs. uniprot
Match: A0A7S4B868_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B868_CHRCT)

HSP 1 Score: 57.8 bits (138), Expect = 2.420e-8
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 1 
Query:   19 EVMAALCENLQPSPYPFGTMALRLLGRLGGCNRRFLGESMP 141
            E++ ALC+ L+P PYPFGT ALR+LG+LGG NR FL  S P
Sbjct:  401 ELVIALCKQLKPHPYPFGTSALRILGKLGGRNRLFLHHSEP 441
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BLAST of mRNA_P-wetherbeei_contig2113.1.1 vs. uniprot
Match: A0A392LY22_9FABA (Transformation/transcription domain-associated protein-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392LY22_9FABA)

HSP 1 Score: 57.8 bits (138), Expect = 2.430e-8
Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:   16 TEVMAALCENLQPSPYPFGTMALRLLGRLGGCNRRFLGESMPVPPTEGP 162
            +EV+ AL  +L+P+PYP+G  AL+LLG+LGG NRRFL E +P+   E P
Sbjct:  311 SEVILALWSHLRPAPYPWGAKALQLLGKLGGRNRRFLKEPLPLECKENP 359
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BLAST of mRNA_P-wetherbeei_contig2113.1.1 vs. uniprot
Match: A0A2K3NKS8_TRIPR (Transformation/transcription domain associated protein n=8 Tax=Trifolium TaxID=3898 RepID=A0A2K3NKS8_TRIPR)

HSP 1 Score: 57.8 bits (138), Expect = 2.450e-8
Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:   16 TEVMAALCENLQPSPYPFGTMALRLLGRLGGCNRRFLGESMPVPPTEGP 162
            +EV+ AL  +L+P+PYP+G  AL+LLG+LGG NRRFL E +P+   E P
Sbjct:  770 SEVILALWSHLRPAPYPWGAKALQLLGKLGGRNRRFLKEPLPLECKENP 818
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BLAST of mRNA_P-wetherbeei_contig2113.1.1 vs. uniprot
Match: A0A8J6CBB9_DIALT (FAT domain-containing protein n=4 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBB9_DIALT)

HSP 1 Score: 57.4 bits (137), Expect = 3.350e-8
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 1 
Query:   19 EVMAALCENLQPSPYPFGTMALRLLGRLGGCNRRFLGESMPVPPTEGPG 165
            E++  L   LQPSP+PFG +ALR+LG+LGG NRRFL E +  P    PG
Sbjct: 1148 EMLLLLTAQLQPSPHPFGPIALRILGKLGGRNRRFLREPVGAPDWRAPG 1196
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BLAST of mRNA_P-wetherbeei_contig2113.1.1 vs. uniprot
Match: A0A426Z3L1_ENSVE (Uncharacterized protein (Fragment) n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426Z3L1_ENSVE)

HSP 1 Score: 55.5 bits (132), Expect = 1.580e-7
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 1 
Query:   16 TEVMAALCENLQPSPYPFGTMALRLLGRLGGCNRRFLGESMPVPPTEGP 162
            +EV+ AL  +L+P PYP+GT AL+LLG+LGG NRRFL E + +   E P
Sbjct:  187 SEVILALWSHLRPLPYPWGTKALQLLGKLGGRNRRFLREPLALECKENP 235
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2113.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YLJ6_9STRA1.720e-1268.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LFI6_ECTSI2.070e-1258.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9U8N6_9STRA4.190e-1056.25Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
A0A7S2EPR7_9STRA9.460e-958.14Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
A0A4D9D5Q9_9STRA1.790e-856.52FAT domain-containing protein n=3 Tax=Monodopsidac... [more]
A0A7S4B868_CHRCT2.420e-863.41Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A392LY22_9FABA2.430e-855.10Transformation/transcription domain-associated pro... [more]
A0A2K3NKS8_TRIPR2.450e-855.10Transformation/transcription domain associated pro... [more]
A0A8J6CBB9_DIALT3.350e-855.10FAT domain-containing protein n=4 Tax=Diacronema l... [more]
A0A426Z3L1_ENSVE1.580e-755.10Uncharacterized protein (Fragment) n=1 Tax=Ensete ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2113contigP-wetherbeei_contig2113:353..517 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LFI6
PFAMsFAT,FATC,PI3_PI4_kinase
Model size165
Max annot lvl2759|Eukaryota
KEGG koko:K08874
KEGG Pathwayko05166,map05166
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000123,GO:0000166,GO:0003674,GO:0003712,GO:0003824,GO:0004402,GO:0004672,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006464,GO:0006468,GO:0006473,GO:0006475,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008080,GO:0008144,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010556,GO:0016043,GO:0016301,GO:0016310,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016773,GO:0017076,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0030554,GO:0031248,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034212,GO:0034641,GO:0035267,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043189,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051276,GO:0051716,GO:0060255,GO:0061733,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140096,GO:0140110,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902493,GO:1902494,GO:1902562,GO:1903506,GO:1990234,GO:2001141
Exons1
Evalue6.05e-13
EggNOG OGsCOG5032@1|root,KOG0889@2759|Eukaryota
Descriptioninternal peptidyl-lysine acetylation
Cds size162
COG categoryBDLTU
BRITEko00000,ko00001,ko01001,ko03021,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186217.2361872-UTR-P-wetherbeei_contig2113:352..3551683186217.2361872-UTR-P-wetherbeei_contig2113:352..355Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2113 353..355 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186217.2508626-CDS-P-wetherbeei_contig2113:355..5171683186217.2508626-CDS-P-wetherbeei_contig2113:355..517Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2113 356..517 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2113.1.1prot_P-wetherbeei_contig2113.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2113 356..517 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2113.1.1

>prot_P-wetherbeei_contig2113.1.1 ID=prot_P-wetherbeei_contig2113.1.1|Name=mRNA_P-wetherbeei_contig2113.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=54bp
MRTCTEVMAALCENLQPSPYPFGTMALRLLGRLGGCNRRFLGESMPVPPT
EGPG
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mRNA from alignment at P-wetherbeei_contig2113:353..517+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2113.1.1 ID=mRNA_P-wetherbeei_contig2113.1.1|Name=mRNA_P-wetherbeei_contig2113.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=165bp|location=Sequence derived from alignment at P-wetherbeei_contig2113:353..517+ (Phaeothamnion wetherbeei SAG_119_79)
GACATGCGGACGTGCACCGAGGTGATGGCGGCGCTGTGCGAAAACCTGCA
GCCGTCCCCCTACCCCTTCGGCACCATGGCGCTGCGCCTCCTGGGGCGGC
TCGGCGGCTGCAACCGCCGCTTCCTTGGTGAGTCCATGCCGGTCCCACCG
ACGGAAGGGCCCGGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2113:353..517+

>mRNA_P-wetherbeei_contig2113.1.1 ID=mRNA_P-wetherbeei_contig2113.1.1|Name=mRNA_P-wetherbeei_contig2113.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=162bp|location=Sequence derived from alignment at P-wetherbeei_contig2113:353..517+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGACGTGCACCGAGGTGATGGCGGCGCTGTGCGAAAACCTGCAGCC
GTCCCCCTACCCCTTCGGCACCATGGCGCTGCGCCTCCTGGGGCGGCTCG
GCGGCTGCAACCGCCGCTTCCTTGGTGAGTCCATGCCGGTCCCACCGACG
GAAGGGCCCGGA
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