mRNA_P-wetherbeei_contig2104.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2104.1.1 vs. uniprot
Match: A0A6H5KSM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM1_9PHAE) HSP 1 Score: 237 bits (605), Expect = 6.220e-64 Identity = 147/455 (32.31%), Postives = 225/455 (49.45%), Query Frame = 1
Query: 1015 LCTMDGVNLGGPGWFRDVFDVAVALDGGVAALDTPAMAAVPSAEFKRRIRLFDADEPISGVVDIKAPFRRWVWCSGITVTLEEHLVAADGDLDGGDVVGSISARAASGHWIRDDVVAKFSLSPRAMARRRGWPARDTYVGEVVAVRHVLVVTISRPWYTFDVVRHIPLMIQRLCPPPSPPFPEAEGEAEGVAAAGMSLPPQVPPAASGGASVVSDVSVDATYASEEAXXXXXXXXXXXXXXNRAVSPPGNHLLVVEDCGGRCELDLGPGGDHADIEGALTGTLSLRGIIRPLASITLVVIRAEVVGGGVADSVVCEHAVVGRWRRARRHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRMHPRCVTSRQLDPPAXXXXLSAGAGPRELAVRLELQPLPLTPTIATLTRDILDIDDEEDLLAVRYYLRLLLEDDRGVTYWNTHEIFLYRTKLNP 2379
+C +D VNLGGPGWF DVF ++V +D +DT +++ VP F+R L D E I+G V + AP + VW SG+TVT EEHL+ D D G++VG++ A+ A+G +I+D V F+L ++ R WP R+TYVG+++A+RH L+V+ RPWYTF+V +PL ++ L P DA +EE NH+LV+ DC GRCE D G D ++ L GT+ + P+ + ++++RAE + G ++ +V EH ++G R+ + V + V S++ D L A G ++AV + L PLTP+ +LT+DI ++ DE +L+ VRYY+RL+LED YW+THEIF +R++ +P
Sbjct: 119 ICNLDKVNLGGPGWFNDVFKISVEVDSDRTWMDTLSLSLVPRNVFRRHCPLLDTSENITGTVTVMAPTSKRVWMSGVTVTFEEHLMTVDSDT--GEIVGALEAQVATGQFIKDKAVFSFNLDLGLLSGHRRWPVRETYVGDLMALRHRLMVSAQRPWYTFNVYSQLPLAMEYLSNAPDE---------------------------------------DAGQDNEEGGP--------------------NHVLVISDCNGRCEFDFGV--DSFNLGDVLQGTVRFTDVALPIVAAHVMLLRAEFMYGEASEVLVAEHTILGECRKEK---------DPLSALGLSEEEQVRRQFMSPFVEQKDIHFVQSQEED-----CRLEAVLGDVDIAVDVPLHTFPLTPSHMSLTQDISEVHDEAELVGVRYYVRLILEDSAQQAYWHTHEIFFHRSEPSP 496
BLAST of mRNA_P-wetherbeei_contig2104.1.1 vs. uniprot
Match: D8LJC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC5_ECTSI) HSP 1 Score: 231 bits (588), Expect = 2.420e-61 Identity = 148/476 (31.09%), Postives = 228/476 (47.90%), Query Frame = 1
Query: 1015 LCTMDGVNLGGPGWFRDVFDVAVALDGGVAALDTPAMAAVPSAEFKRRIRLFDADEPISGVVDIKAPFRRWVWCSGITVTLEEHLVAADGDLDGGDVVGSISARAASGHWIRDDVVAKFSLSPRAMARRRGWPARDTYVGEVVAVRHVLVVTISRPWYTFDVVRHIPLMIQRLCPPPSPPFPEAEGEAEGVAAAGMSLPPQVPPAASGGASVVSDVSVDATYASEEAXXXXXXXXXXXXXXNRAVSPPGNHLLVVEDCGGRCELDLGPGGDHADIEGALTGTLSLRGIIRPLASITLVVIRAEVVGGGVADSVVCEHAVVGRWRRARRHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRMHPRCVTSRQLDPPAXXXXLSAGAGPRELAVRLELQPLPLTPTIATLTRDILDIDDEEDLLAVRYYLRLLLEDDRGVTYWNTHEIFLYRTKLNPL-------ELVAAGDENDVQE 2421
+C +D VNLGGPGWF DVF ++V +D +DT +++ VP F+R L D E I+G V + AP + VW SGITVT EEHL+ D D G++VG++ A+ A+G +I D V F+L + R WP R+TYVG+++A+RH L+V+ RPWYTF+V +PL ++ L P DA +EE NH+LV+ DC GRC+ D G D ++ L GT+ + P+ + ++++RAE + G ++ +V EH ++G R+ + V + V S+ + A G ++ V + L PLTP+ +LT+DI ++DE +L+ VRYY+RL+LED YW+THEIF +R++ +P ++ + G E DV +
Sbjct: 156 ICNLDKVNLGGPGWFNDVFKISVEVDSDRTWMDTLSLSLVPRNVFQRHCPLLDTSENITGTVTVTAPTSKRVWMSGITVTFEEHLMTVDSDT--GELVGALEAQVATGQFINDKAVFSFNLDLGLLDGHRRWPVRETYVGDLMALRHRLMVSAQRPWYTFNVYSQLPLAMEYLSSAPDE---------------------------------------DAGQENEEGGP--------------------NHVLVISDCNGRCDFDFGV--DSFNLGDVLQGTVRFTDVTSPIVAAHVMLLRAEFMYGEASEVLVAEHTILGECRKEK---------DPLSAVGLSEEEQVRRQFMSPYVEQKDIHFVRSQ-----GEECRMEAVLGDVDIVVDVPLHAFPLTPSHMSLTQDIAAVNDEAELVGVRYYIRLILEDSTQQAYWHTHEIFFHRSEPSPSSQGQGDDDVSSTGGEYDVDD 554
BLAST of mRNA_P-wetherbeei_contig2104.1.1 vs. uniprot
Match: A0A835YLM0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLM0_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.830e-43 Identity = 150/497 (30.18%), Postives = 227/497 (45.67%), Query Frame = 1
Query: 976 DESDRRAAGLTAPLCTMDGVNLGGPGWFRDVFDVAVALDGGVAAL-DTPAMAAVPSAEFKRRIRLFDADEPISGVVDIKAPFRRWVWCSGITVTLEEHLVAADGDLDGGDVVGSISARAASGHWIRDDVVAKFSLSPRAMARRRGWPA--RDTYVGEVVAVRHVLVVTISRPWYTFDVVRHIPLMIQRLCPPPSPPFPEAEGEAEGVAAAGMSLPPQVPPAASGGASVVSDVSVDATYASEEAXXXXXXXXXXXXXXNRAVSPPGNHLLVVEDCGGRCELDLGPGGDHADIEGALTGTLSLRGIIRPLASITLVVIRAEVVGGGVADSVVCEHAVVGRWRRARRHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRMHPRCVTSRQLDPPAXXXXLSAGAGPRELAVRLELQPLPLTPTIATLTRD------ILDIDDEEDLLAVRYYLRLL-----LEDDRGV----TYWNTHEIFLYRTKLNPLELVAAGDEND 2412
DE D +A + C + NLGGPGWF DV V V L + D+PA++ VP+ F+R +L DA P+ G V ++AP R VW S + + +EEHLV + G D++ S A +I F L+ A+ R G R+ YVG+++A+RH LVVT +RPWYTFDVV +P+++QR+ PPP +A+ A G PQ N P N L+++ DC GR E D DI+G L GT++ +++ L+ + +V+IR E++ G + +S+V EH ++GR + V HPR ++ QL + + +G L VR+ L +PL+PT+A L + + VRYY+RL+ LE++ G +WNTHE+FL+R++L A G E+D
Sbjct: 80 DEEDTQAT--SNAYCNL---NLGGPGWFTDVLTVTVELANDSRVVKDSPALSLVPAGAFQRWAQLVDAAAPMVGNVVLRAPSGRSVWISTLRLAIEEHLVLLE---SGSDLLCSAGIDVAPAQYIDGAKSFPFVLNIDALNRGGGGGTGLREGYVGDMLALRHRLVVTAARPWYTFDVVTQVPIVVQRVVPPPQ----DADSHAYG---------PQ----------------------------------------NEEGGP--NTLMILPDCNGRAEFAFER--DALDIDGELVGTVAFTDVVKALSGVHVVMIRTEILAGNLFESIVGEHTILGR-DPPGAPAYRPPPGQTPDETTDPLHPPEDLFIASPYVDYRHPRASSTAQLGAASNGPFIGSGT----LPVRVPLAHMPLSPTMAHLGVERGAAGXXXXXXXXXXXVGVRYYVRLIIEEQPLEEEGGQRPTPVFWNTHEVFLFRSRLR-----AGGYESD 501
BLAST of mRNA_P-wetherbeei_contig2104.1.1 vs. uniprot
Match: A0A835YXF0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXF0_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.970e-40 Identity = 128/473 (27.06%), Postives = 202/473 (42.71%), Query Frame = 1
Query: 1015 LCTMDGVNLGGPGWFRDVFDVAVALDGGVAALDTPAMAAVPSAEFKRRIRLFDADEPISGVVDIKAPFRRWVWCSGITVTLEEHLVAADGDLDGGDVVGSISARAASGHWIRDDVVAKFSLSPRAMARRRGWPARDTYVGEVVAVRHVLVVTISRPWYTFDVVRHIPLMIQRLCPPPSPPFPEAEGEAEGVAAAGMSLPPQVPPAASGGASVVSDVSVDATYASEEAXXXXXXXXXXXXXXNRAVSPPGNHLLVVEDCGGRCELDLGPGGDHADIEGALTGTLSLRGIIRPLASITLVVIRAEVVGGGVADSVVCEHAVVGRWRRARRHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRMHPR-CVTSRQLDPPAXXXXLSAGAGPRELAVRLELQPLPLTPTIATLTRDIL---------------DIDDEEDLLAVRYYLRLLLEDDRGV-----TYWNTHEIFLYRTK 2370
+C+MD + GGPGWF D + V L D PA++ V FK + L DA I G + ++AP R VW + ++VTLEEHL D G ++ + + A G ++ F L+ +A R+ Y+G+++AVRH+L VT +RPWYTF++ +PL +QR+ PPP A + + PQ N P N ++++ DC GR E D ++G + GT+ L+ + +A+ +++IR E++ G + ++V+ EH ++G + V HP CVT ++ G +AVR L +PLTPT+ + + D D E+ ++ VRY++RL+LE TYWNTHEIFLYR++
Sbjct: 3 ICSMDALRAGGPGWFADALQINVDLATDQKVRDDPALSVVAPDLFKPWVPLVDASHSIKGTITLQAPHGRRVWITSLSVTLEEHLALLD--TVGSALLSTATISVAGGRYVEGTCTLDFILTMDDLAGMGEGGLREGYIGDMLAVRHLLTVTAARPWYTFNLEHTVPLAVQRVSPPP--------------AGSATTQGPQ----------------------------------------NEEGGP--NTVMLIPDCNGRAEFTFER--DTLALDGTVEGTVELKELSAAIAAAHVMIIRTEMLSGSMFETVIGEHTILGL------STPEGLANRAIPKHAANGLMDDQDFVACPFVEFRHPHVCVTEQE------GCQTLPVKGNATIAVRFSLAGMPLTPTMRYVGAEAPPSGTPPKEGEKHQGGDEDGEDGVVGVRYFMRLVLEGQESAWEPAPTYWNTHEIFLYRSR 403
BLAST of mRNA_P-wetherbeei_contig2104.1.1 vs. uniprot
Match: A0A6V1K188_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K188_HETAK) HSP 1 Score: 113 bits (282), Expect = 3.890e-23 Identity = 88/313 (28.12%), Postives = 138/313 (44.09%), Query Frame = 1
Query: 1036 NLGGPGWFRDVFDVAVALDGGVAALDTPAMAAVPSAEFKRRIRLFDADEPISGVVDIKAPFRRWVWCSGITVTLEEHLVAADGDLDGGDVVGSISARAASGHWIRDDVVAKFSLSPRAMARRRGWPARDTYVGEVVAVRHVLVVTISRPWYTFDVVRHIPLMIQRLCPPPSPPFPEAEGEAEGVAAAGMSLPPQVPPAASGGASVVSDVSVDATYASEEAXXXXXXXXXXXXXXNRAVSPPGNHLLVVEDCGGRCELDLGPGGDHADIEGALTGTLSLRGIIRPLASITLVVIRAEVVGGGVADSVVCEHAVV 1974
N GGPGWF DVF++ + LD D +P + + LF+ + I+G+V I +P R VW + ITV LEE+LV + G ++ +++ KFSL + +G + Y G+++++RHVL VT+ RPWYTFDV R + + +QR+ P+P + E EGV VP H+L V D GG C LD D D+ + G + L G+ P+ S+ +++I+ E G V +S++ EH ++
Sbjct: 7 NFGGPGWFADVFELEIVLDKQCEVDDPGDPFVLPWNAWTGKCFLFETTDVITGIVKITSPANRKVWHNVITVRLEEYLVGPESY--GSSESCALEIEVKEPGYVKGTEEIKFSLDLNEI---QGAQWNEWYAGKLLSLRHVLAVTVERPWYTFDVARQLVVGLQRV--DPAPGTSQGEPTEEGV----------VP-----------------------------------------------HVLQVLDAGGVCNLDYRI--DSYDLGATVRGAVHLAGLAAPVVSVRVLLIQVEFADGDVYESILLEHTLI 253
BLAST of mRNA_P-wetherbeei_contig2104.1.1 vs. uniprot
Match: A0A835Z668_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z668_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.060e-10 Identity = 128/456 (28.07%), Postives = 184/456 (40.35%), Query Frame = 1
Query: 1036 NLGGPGWFRDVFDVAVALDGGVAALDTPAMAAVPSAEFK--RRIRLFDADEPISGVVDIKAPFRRWVWCSGITVTLEEHLV----AADGDL--DGGDVVGSISARAASGHWIRDDVVAKFSLSPRAMARRRGWPARDTYVGEVVAVRHVLVVTISRPWYTFDVVRHIPLMIQRLCPPPSPPFPEAEGEAEGVAAAGMSLPPQVPPAASGGASVVSDVSVDATYASEEAXXXXXXXXXXXXXXNRAVSPPGNHLLVVEDCGGRCELDLGPGGDHADIEGALTGTLSLRGIIRP-LASITLVVIRAEVVGGGVADSVVCEHAVVGRWRRARRHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRMHPRCVTSRQLDPPAXXXXLSAGAGPRELAVRLELQPLPLTPTIATLTRDILDIDDEEDLLAVRYYLRLLLEDDRGVTYWNTHEIFLYRTKLN 2376
N+GGPGWF DVF+V + +D ++ D VPS+ + + D I G + +KAP V+ G+++ L E+ AA +L V+G S + V FSL A+ R R+TY G + A+RH L T++RP +TF VV H + +QR G A +P S G +V V+ P L V+ CGGRC P G A ++ + G + + P A+ L+++ E VGG + V H + G R XXXXXXXXXXXXXXX G PP A P+ +AV L PL PT A ++ +RY LRL++EDD G T+ + E+ LYR +++
Sbjct: 9 NIGGPGWFHDVFEVQIVVDTDLSFQDPSDRFIVPSSAHHPDKPTPIVDCTTAIRGNIIVKAPPGHKVYYEGVSLKLTEYCATLSPAATTELASHAHPVIGPGS--------VEGSVYIPFSLD--AIDARA---LRETYPGRLFALRHTLTATVARPRWTFPVVAHQAVALQR------------PGGAXXXXXXXXXXXXXLPGLRSAGGAV-------------------------------GVAEP--RTLRVDACGGRCTF-AAPSGVFA-LDEDIAGDFVVDNLAAPGAAAAALLLVELEGVGGAYEERVALAHPLFGALTR-----DVGAAPAAPGAAAXXXXXXXXXXXXXXXAGDAILAAEAGSNAVPPGGVTGTHA---PQRVAVALARAPL--HPTFAV------SVEQGGRACELRYLLRLVVEDDGGRTFTDATEVVLYRRRVS 388
BLAST of mRNA_P-wetherbeei_contig2104.1.1 vs. uniprot
Match: A0A7S3PQB9_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PQB9_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 4.850e-6 Identity = 101/452 (22.35%), Postives = 172/452 (38.05%), Query Frame = 1
Query: 1051 GWFRDVFDVAVALDGGVAALDTPAMAAVPSAEFKRRIRLFDADEPISGVVDIKAPFRRWVWCSGITVTLEEHLVAADGDLDGGDVVGSISARAASGHWIRDDVVAKFSLSPRAMARRRGWPARDTYVGEVVAVRHVLVVTISRPWYTFDVVRHIPLMIQRLCPPPSPPFPEAEGEAEGVAAAGMSLPPQVPPAASGGASVVSDVSVDATYASEEAXXXXXXXXXXXXXXNRAVSPPGNHLLVVEDCGGRCELDLGPGGDHA--DIEGALTGTLSLRGIIR-PLASITLVVIRAEVVGGGVADSVVCEH-------AVVGRWRRARRHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRMHPRCVTSRQLDPPAXXXXLSAGAGP-RELAVRLELQPLPLTPTIATLTRDILDIDDEEDLLAVRYYLRLLLEDDRGVTYWNTHEIFLYRTKL 2373
GW+ D+F++ ++LD + T + SA + L+D I+G V + P VW G+ V L+ V+ D + + + + + + +I F + + + + + +TY GE+ + L+VTI RPWYTF+V + L IQ + P G+ + DV+ EA P +H++ + D G C L DH +I L G L+ + + +A + LV+ + E ++ V E VV + + ++ P V +L PP GP E V E + P++ T+ + D+ + + L+VRYYLRL+++D +G TYWNT+E+ LYR L
Sbjct: 4 GWWDDIFELEISLD---SEHFTNRGGLLGSA----KCPLYDTKSTITGKVIVTPPPNTAVWQYGVDVELQGS-VSQFTDFETSEYL-KVKTKVSDEGYISAKTEFAFEID---LTKVKNFLILETYDGELFHYSYELIVTIVRPWYTFNVQKAAMLAIQNVHEAP-------RGDK------------------------LDDVAQSLIEKGSEA--------------------PISHVIKINDYSGTCFLTY----DHLCYNIGDVLIGNLTFKEDPQIHIAEVKLVLYKIEKADVEESEYNVKEQIIDISKATVVKEPEKGEEPTETVQEQVPNDAGEEQKAAERVADEPEVKTAKVSPDEV---ELKPPI---------GPVAEKLVTFEFKMEPVSHTLGVTLHE--DLKEADVFLSVRYYLRLVIKDIQGNTYWNTNEVILYRKAL 374
BLAST of mRNA_P-wetherbeei_contig2104.1.1 vs. uniprot
Match: A0A7S3PIL6_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PIL6_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.220e-5 Identity = 41/128 (32.03%), Postives = 64/128 (50.00%), Query Frame = 1
Query: 1165 LFDADEPISGVVDIKAPFRRWVWCSGITVTLEEHLVAADGDLDGGDVVGSISARAASGHWIRDDVVAKFSLSPRAMARRRGWPARDTYVGEVVAVRHVLVVTISRPWYTFDVVRHIPLMIQRLCPPPS 1548
LFDA I+G V I P VW G+ + LE +V ++ V+ S + +I ++ F + A+ D+Y GE+ + + +VVTI RPWYTFDV++H P+ IQ + P+
Sbjct: 5 LFDAKGKITGTVVIAPPEGSAVWQWGVALNLES-IVTFFESMNSSTVM-SHEIEISKEGYISEETEYPFEIDLAALQDAN---LLDSYDGELFCISYDVVVTIKRPWYTFDVMQHSPIAIQNVLSAPA 127 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2104.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2104.1.1 >prot_P-wetherbeei_contig2104.1.1 ID=prot_P-wetherbeei_contig2104.1.1|Name=mRNA_P-wetherbeei_contig2104.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=845bp MQEADEEGGILVPELAFRNYDDDEGDMTEEAATTGGGGSAPASRRGSPRSback to top mRNA from alignment at P-wetherbeei_contig2104:2..5664+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2104.1.1 ID=mRNA_P-wetherbeei_contig2104.1.1|Name=mRNA_P-wetherbeei_contig2104.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5663bp|location=Sequence derived from alignment at P-wetherbeei_contig2104:2..5664+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2104:2..5664+ >mRNA_P-wetherbeei_contig2104.1.1 ID=mRNA_P-wetherbeei_contig2104.1.1|Name=mRNA_P-wetherbeei_contig2104.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2535bp|location=Sequence derived from alignment at P-wetherbeei_contig2104:2..5664+ (Phaeothamnion wetherbeei SAG_119_79)back to top |