mRNA_P-wetherbeei_contig1080.4.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1080.4.3
Unique NamemRNA_P-wetherbeei_contig1080.4.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1080.4.3 vs. uniprot
Match: D7FIB3_ECTSI (Eukaryotic peptide chain release factor subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIB3_ECTSI)

HSP 1 Score: 438 bits (1126), Expect = 3.880e-145
Identity = 219/287 (76.31%), Postives = 245/287 (85.37%), Query Frame = 2 
Query:  188 LQGSTRDILHKFSVELPKKHGRGGQSALRFARLRLEKRHNYIRKVAELAVTMFITDNKCNCRGLILAGSAEFKNELMTSDLFDPRLRKAVIKTVDVSYGGEAGFNQAIELSAEALGQVKLIREKRLLQQASAQYFEEISQDTGEYCFMVDDTLKALELGAVETLICWDNLNIDRLQLRNNATGAEKVLHLRPEQEANESLFRDADTGTELETIEKQPLVEWIANNYKRFGCTLEFVTDRSQEGSQFCRGFGGIGGLLRWRVDFAGMDESNHDAAGGEGGSEDEWEGF 1048
            LQGSTRD+LHKFSV+LPKKHGRGGQSALRFARLRLEKRHNY+RKVAE A   FITDNKCNC GL+LAGSAEFKNEL  SDLFDPRL K VIK VDVSYGGEAGFNQAIELSAE LG VKL++EKRLLQ+    YF+EI+QDTG+YCFMVDDTLK L+LGAVETLI WDNL+I+RL++RNN+TG EKVLHL PEQE N++ F D +TG ELE  +KQ LVEWIANNYK FG  LEF+T+RSQEGSQFC+GFGGIGG+LRWRVDFA MDESN++        ED  EGF
Sbjct:  165 LQGSTRDVLHKFSVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCAGLVLAGSAEFKNELQGSDLFDPRLLKNVIKMVDVSYGGEAGFNQAIELSAETLGSVKLVQEKRLLQK----YFDEINQDTGKYCFMVDDTLKGLDLGAVETLIVWDNLDINRLEVRNNSTGEEKVLHLTPEQENNDTHFHDTETGVELEVTDKQSLVEWIANNYKNFGAALEFITNRSQEGSQFCKGFGGIGGILRWRVDFAEMDESNYEDV------EDWGEGF 441
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BLAST of mRNA_P-wetherbeei_contig1080.4.3 vs. uniprot
Match: A0A836CQL8_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQL8_9STRA)

HSP 1 Score: 432 bits (1112), Expect = 6.070e-143
Identity = 215/284 (75.70%), Postives = 244/284 (85.92%), Query Frame = 2 
Query:  188 LQGSTRDILHKFSVELPKKHGRGGQSALRFARLRLEKRHNYIRKVAELAVTMFITDNKCNCRGLILAGSAEFKNELMTSDLFDPRLRKAVIKTVDVSYGGEAGFNQAIELSAEALGQVKLIREKRLLQQASAQYFEEISQDTGEYCFMVDDTLKALELGAVETLICWDNLNIDRLQLRNNATGAEKVLHLRPEQEANESLFRDADTGTELETIEKQPLVEWIANNYKRFGCTLEFVTDRSQEGSQFCRGFGGIGGLLRWRVDFAGMDESNHDAAGGEGGSEDEW 1039
            LQGS R+++HKF+V+LPKKHGRGGQSALRFARLRLEKRHNY+RKVAE A   FITDNKCNC GL++AGSA+FK+ELMTSDLFDPRL K V+KTVDVSYGGE+GFNQAIELS EALG VKL++EKRLLQ+    YF+EISQDTG+YCFMVDDTLK L+LGAVETLI W+NL+I+R  LRNN T  EKVLHL PEQE NES FRD +TG ELETI+K  LVEWIANNYK FG TLEFVT+RSQEGSQFCRGFGGIGGLLRW+VDFA +DE+ H+        +DEW
Sbjct:  167 LQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQK----YFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMHEE------DDDEW 440
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BLAST of mRNA_P-wetherbeei_contig1080.4.3 vs. uniprot
Match: F0Y084_AURAN (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y084_AURAN)

HSP 1 Score: 399 bits (1025), Expect = 1.510e-131
Identity = 199/274 (72.63%), Postives = 233/274 (85.04%), Query Frame = 2 
Query:  188 LQGSTRDILHKFSVELPKKHGRGGQSALRFARLRLEKRHNYIRKVAELAVTMFITDNKCNCRGLILAGSAEFKNELMTSDLFDPRLRKAVIKTVDVSYGGEAGFNQAIELSAEALGQVKLIREKRLLQQASAQYFEEISQDTGEYCFMVDDTLKALELGAVETLICWDNLNIDRLQLRNNATGAEKVLHLRPEQEANESLFRDADTGTELETIEKQPLVEWIANNYKRFGCTLEFVTDRSQEGSQFCRGFGGIGGLLRWRVDFAGMDESNHDAA 1009
            LQG+ R++LHKFSV+LPKKHGRGGQSALRFARLR+EKRHNY+RKV+ELAV MFIT +K N  GL+LAGSA+FK+EL TSD+FD RL + VIKTVDVSYGGE GFNQAIELSAE LG VKL++EKRLLQ+    YF+EISQDTG+YCFMV DTL+ALELGAVE L+ W+NL++DR+ LRN+A G +KVLHL  EQ+ANE  F D  +G ELE +EK PLVEW ANNYK FG +LEFVT+RSQEGSQFCRGFGGIGG+LRWRVDF  +D +  DAA
Sbjct:   61 LQGNNREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVSELAVQMFITADKPNVSGLVLAGSADFKSELQTSDMFDQRLARVVIKTVDVSYGGEIGFNQAIELSAETLGSVKLVQEKRLLQK----YFDEISQDTGKYCFMVSDTLRALELGAVEILVVWENLDVDRITLRNHAAGEDKVLHLSKEQQANEQYFHDPISGVELEVVEKLPLVEWFANNYKTFGTSLEFVTNRSQEGSQFCRGFGGIGGILRWRVDFLEIDMAE-DAA 329
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BLAST of mRNA_P-wetherbeei_contig1080.4.3 vs. uniprot
Match: F0YK48_AURAN (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK48_AURAN)

HSP 1 Score: 400 bits (1027), Expect = 2.580e-130
Identity = 201/274 (73.36%), Postives = 234/274 (85.40%), Query Frame = 2 
Query:  188 LQGSTRDILHKFSVELPKKHGRGGQSALRFARLRLEKRHNYIRKVAELAVTMFITDNKCNCRGLILAGSAEFKNELMTSDLFDPRLRKAVIKTVDVSYGGEAGFNQAIELSAEALGQVKLIREKRLLQQASAQYFEEISQDTGEYCFMVDDTLKALELGAVETLICWDNLNIDRLQLRNNATGAEKVLHLRPEQEANESLFRDADTGTELETIEKQPLVEWIANNYKRFGCTLEFVTDRSQEGSQFCRGFGGIGGLLRWRVDFAGMDESNHDAA 1009
            LQG+ R++LHKFSV+LPKKHGRGGQSALRFARLR+EKRHNY+RKVAELAV MFI+ +K N  GL+LAGSA+FK+EL TSD+FD RL + VIKTVDVSYGGE GFNQAIELSAE LG VKL++EKRLLQ+    YF+EISQDTG+YCFMV+DTLKALELGAVETL+ W+NL+IDRL LRN+A G +KVLHL  EQ+A+E  F DA +G ELE  EK  LVE++ANNYK FG TLEFVT+RSQEGSQFCRGFGGIGG+LRWRVDF  M+ +   AA
Sbjct:  166 LQGNNREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAELAVQMFISADKPNVAGLVLAGSADFKSELHTSDMFDQRLARVVIKTVDVSYGGEIGFNQAIELSAETLGSVKLVQEKRLLQK----YFDEISQDTGKYCFMVEDTLKALELGAVETLVVWENLDIDRLTLRNHAAGEDKVLHLSKEQQAHEEYFHDAASGVELEVTEKVSLVEFLANNYKSFGTTLEFVTNRSQEGSQFCRGFGGIGGILRWRVDFLEMEMAEESAA 435
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BLAST of mRNA_P-wetherbeei_contig1080.4.3 vs. uniprot
Match: A0A8J2SAF2_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SAF2_9STRA)

HSP 1 Score: 398 bits (1023), Expect = 1.480e-129
Identity = 201/275 (73.09%), Postives = 235/275 (85.45%), Query Frame = 2 
Query:  188 LQGSTRDILHKFSVELPKKHGRGGQSALRFARLRLEKRHNYIRKVAELAVTMFITDNKCNCRGLILAGSAEFKNELMTSDLFDPRLRKAVIKTVDVSYGGEAGFNQAIELSAEALGQVKLIREKRLLQQASAQYFEEISQDTGEYCFMVDDTLKALELGAVETLICWDNLNIDRLQLRNNATGAEKVLHLRPEQEANESLFRDADTGTELETIEKQPLVEWIANNYKRFGCTLEFVTDRSQEGSQFCRGFGGIGGLLRWRVDFAGMDESNHDAAG 1012
            LQG+ RD+LHKFSV+LPKKHGRGGQSALRFARLRLEKRHNY+RKVAELAV MFIT +K N  GL+LAGSA+FK+EL TSD+FD RL + VIK VDVSYGGE GFNQAIELSAE LG VKL++EKRLLQ+    +F+EISQDTG+YCFMV DTL+ALELGAVETLI W+NL+IDR++LRN+A   ++VLHL  EQ+A+E  F D+ +G ELE IEK PLVEW+ANNYK FG TLEF+T+RSQEGSQFCRGFGGIGG+LRWRVDF  +D +  D AG
Sbjct:  176 LQGNNRDVLHKFSVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAELAVQMFITADKPNVSGLVLAGSADFKSELQTSDMFDQRLARIVIKMVDVSYGGEIGFNQAIELSAETLGSVKLVQEKRLLQK----FFDEISQDTGKYCFMVVDTLRALELGAVETLIVWENLDIDRIKLRNHAASEDRVLHLSKEQQAHEHYFHDSVSGVELEEIEKLPLVEWLANNYKSFGTTLEFITNRSQEGSQFCRGFGGIGGILRWRVDFLEIDMAE-DTAG 445
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BLAST of mRNA_P-wetherbeei_contig1080.4.3 vs. uniprot
Match: A0A7S2UVJ2_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ2_9STRA)

HSP 1 Score: 398 bits (1022), Expect = 1.830e-129
Identity = 200/268 (74.63%), Postives = 229/268 (85.45%), Query Frame = 2 
Query:  188 LQGSTRDILHKFSVELPKKHGRGGQSALRFARLRLEKRHNYIRKVAELAVTMFITDNKCNCRGLILAGSAEFKNELMTSDLFDPRLRKAVIKTVDVSYGGEAGFNQAIELSAEALGQVKLIREKRLLQQASAQYFEEISQDTGEYCFMVDDTLKALELGAVETLICWDNLNIDRLQLRNNATGAEKVLHLRPEQEANESLFRDADTGTELETIEKQPLVEWIANNYKRFGCTLEFVTDRSQEGSQFCRGFGGIGGLLRWRVDFAGMDE 991
            LQG+TR++LHKF+V+LPKKHGRGGQSALRFARLR+EKRHNY+RKVAELAV  FI+DNK NC G++LAGSA+FK+EL TSD+FD RL + V+KTVDVSYGGE GFNQAIELSAE L  VKL++EKRLLQ     YF+EISQDTG+YCFMV+DTLKAL+LGAVETLI ++ L  +RL LRNN+T  EKVL L P+QE N S F D +TG ELETIEK PLVEW ANNYK+FG TLEFVT+RSQEGSQF RGFGGIGG LRWRVDFA M E
Sbjct:  157 LQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAELAVQFFISDNKPNCSGIVLAGSADFKSELQTSDMFDNRLARVVLKTVDVSYGGENGFNQAIELSAETLANVKLVQEKRLLQN----YFDEISQDTGKYCFMVEDTLKALDLGAVETLIIYEALETNRLVLRNNSTQEEKVLFLTPDQEQNASHFHDPETGVELETIEKMPLVEWFANNYKKFGTTLEFVTNRSQEGSQFVRGFGGIGGCLRWRVDFAEMAE 420
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BLAST of mRNA_P-wetherbeei_contig1080.4.3 vs. uniprot
Match: A0A7S2F8Y1_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F8Y1_9STRA)

HSP 1 Score: 391 bits (1005), Expect = 4.240e-127
Identity = 197/269 (73.23%), Postives = 230/269 (85.50%), Query Frame = 2 
Query:  188 LQGSTRDILHKFSVELPKKHGRGGQSALRFARLRLEKRHNYIRKVAELAVTMFIT--DNKCNCRGLILAGSAEFKNELMTSDLFDPRLRKAVIKTVDVSYGGEAGFNQAIELSAEALGQVKLIREKRLLQQASAQYFEEISQDTGEYCFMVDDTLKALELGAVETLICWDNLNIDRLQLRNNATGAEKVLHLRPEQEANESLFRDADTGTELETIEKQPLVEWIANNYKRFGCTLEFVTDRSQEGSQFCRGFGGIGGLLRWRVDFAGMD 988
            LQGS R+I+HKFSV+LPKKHGRGGQSALRFARLRLEKRHNY+RKVAELAV  FI   DN+ N RGL+LAGSA+FK EL TSDLFDPRL KAVIKTVDVSYGGE GFNQAIELSAE LG VKL++EK+LLQ     +F+EISQDTG+YCFMV DTL ALELGAVETLI W++L++DR+ LRNN+T  E +++L  EQ+ N+S F DA TGTELET++K+ LVEW A NYK FG  LEFVT+RSQEGSQFCRGFGGIGG+LRW+VDF+ ++
Sbjct:  136 LQGSNREIVHKFSVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAELAVQFFINQNDNRPNVRGLVLAGSADFKTELATSDLFDPRLLKAVIKTVDVSYGGENGFNQAIELSAETLGSVKLVQEKKLLQG----WFDEISQDTGKYCFMVKDTLAALELGAVETLIVWESLDVDRITLRNNSTQEESIVYLSSEQQKNDSYFHDAATGTELETLKKEQLVEWFAENYKTFGTNLEFVTNRSQEGSQFCRGFGGIGGILRWKVDFSEIE 400
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BLAST of mRNA_P-wetherbeei_contig1080.4.3 vs. uniprot
Match: A0A7S3MEB0_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEB0_9STRA)

HSP 1 Score: 387 bits (995), Expect = 2.500e-125
Identity = 196/289 (67.82%), Postives = 231/289 (79.93%), Query Frame = 2 
Query:  188 LQGSTRDILHKFSVELPKKHGRGGQSALRFARLRLEKRHNYIRKVAELAVTMFITDNKCNCRGLILAGSAEFKNELMTSDLFDPRLRKAVIKTVDVSYGGEAGFNQAIELSAEALGQVKLIREKRLLQQASAQYFEEISQDTGEYCFMVDDTLKALELGAVETLICWDNLNIDRLQLRNNATGAEKVLHLRPEQEANESLFRDADTGTELETIEKQPLVEWIANNYKRFGCTLEFVTDRSQEGSQFCRGFGGIGGLLRWRVDFAGMD---ESNHDAAGGEGGSEDEWEG 1045
            LQG+TR ILHKF+V+LPKKHGRGGQSALRFARLRLEKRHNY+ KVAELA   FITDNKCN  GLILAGSA+FK  L+ SD FDPRL KAV++TVDVSYG E GFNQAIEL+ E L  VKL++EKRLLQ+    Y +EISQDTG+YCFMV DTL+ALE+ +VETLI W+NL ++RL +RN +T  E VLHL P+QE N+S F D  TG +LE I++Q LVEW+ANNYK FG  LEF+TDRSQEGSQFCRGFGGIGGLLRW+VDF  M+   E +H  A  +   ED ++G
Sbjct:  162 LQGNTRSILHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVTKVAELAANYFITDNKCNVTGLILAGSADFKEVLLNSDRFDPRLAKAVLRTVDVSYGMEPGFNQAIELATECLSNVKLVQEKRLLQR----YMDEISQDTGKYCFMVQDTLQALEMSSVETLIVWENLAVNRLVVRNVSTSEESVLHLTPDQERNDSHFHDPVTGVQLEIIDRQTLVEWLANNYKSFGAKLEFITDRSQEGSQFCRGFGGIGGLLRWKVDFVEMEMAAELDHAGAADDDDDEDYFDG 446
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BLAST of mRNA_P-wetherbeei_contig1080.4.3 vs. uniprot
Match: A0A7S1GJV0_CYCTE (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJV0_CYCTE)

HSP 1 Score: 385 bits (988), Expect = 5.380e-125
Identity = 190/275 (69.09%), Postives = 231/275 (84.00%), Query Frame = 2 
Query:  188 LQGSTRDILHKFSVELPKKHGRGGQSALRFARLRLEKRHNYIRKVAELAVTMFITDN-KCNCRGLILAGSAEFKNELMTSDLFDPRLRKAVIKTVDVSYGGEAGFNQAIELSAEALGQVKLIREKRLLQQASAQYFEEISQDTGEYCFMVDDTLKALELGAVETLICWDNLNIDRLQLRNNATGAEKVLHLRPEQEANESLFRDADTGTELETIEKQPLVEWIANNYKRFGCTLEFVTDRSQEGSQFCRGFGGIGGLLRWRVDFAGMDESNHDAA 1009
            +QGS R++LHKFSV+LPKKHGRGGQSALRFARLRLEKRHNY+RKVAELA  +F+ D  K N +G++LAGSA+FK+ELM SDLFD RL+K VIK VDVSYGGE GFNQAIE+SA+ L  VKL++EK+LLQ+    Y +EISQDTG+YCFMVDDTLKALELGAVE LI WDNL+I+R  LRN +T  ++++HL  EQE N++ F D DTG ELE +EK+P+VEW+ANNYK FGC LEFVTDRS EG+QF +GFGGIGG+LRW+VDFA + +S  +AA
Sbjct:  105 VQGSNREVLHKFSVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAELATQLFVPDGQKPNVQGIVLAGSADFKSELMRSDLFDQRLQKIVIKMVDVSYGGENGFNQAIEMSADTLSSVKLMKEKKLLQK----YMDEISQDTGKYCFMVDDTLKALELGAVEDLIIWDNLDINRFVLRNTSTSEDRIVHLNKEQEQNDNFFHDPDTGVELEVVEKEPMVEWMANNYKNFGCNLEFVTDRSSEGTQFVKGFGGIGGILRWKVDFAEL-QSFEEAA 374
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BLAST of mRNA_P-wetherbeei_contig1080.4.3 vs. uniprot
Match: A0A1Z5JEK5_FISSO (Eukaryotic peptide chain release factor subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEK5_FISSO)

HSP 1 Score: 387 bits (993), Expect = 7.110e-125
Identity = 197/290 (67.93%), Postives = 238/290 (82.07%), Query Frame = 2 
Query:  188 LQGSTRDILHKFSVELPKKHGRGGQSALRFARLRLEKRHNYIRKVAELAVTMFITDN-KCNCRGLILAGSAEFKNELMTSDLFDPRLRKAVIKTVDVSYGGEAGFNQAIELSAEALGQVKLIREKRLLQQASAQYFEEISQDTGEYCFMVDDTLKALELGAVETLICWDNLNIDRLQLRNNATGAEKVLHLRPEQEANESLFRDADTGTELETIEKQPLVEWIANNYKRFGCTLEFVTDRSQEGSQFCRGFGGIGGLLRWRVDFAGMDESNHDAAGGE----GGSEDEWE 1042
            +QGS R+ILHKFSV+LPKKHGRGGQSALRFARLRLEKRHNY+RKVAE+A  +F+ D  + N RG++LAGSA+FK ELM SDLFDPRL K V+K VDVSYGGE GFNQAIEL+A+AL  VKL++EK+LLQ+    Y +EISQDTG+YCFMV+DTLKAL+LGAVE LI WDNL + R  LRN  TG EKV+HL  E+E N+  FRD ++GTELETIEK+ LVEW ANN+K+FGC LEFVTDRS EG+QF +GFGGIGG+LRW+VDF  ++ SN + A G+    GG++DE E
Sbjct:  160 VQGSNREILHKFSVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEMATQLFVPDGQRPNVRGIVLAGSADFKAELMRSDLFDPRLAKIVVKLVDVSYGGEQGFNQAIELAADALANVKLMKEKKLLQR----YMDEISQDTGKYCFMVEDTLKALDLGAVEDLIIWDNLEVSRYVLRNQTTGEEKVVHLSKEEEKNDEHFRDPESGTELETIEKEALVEWFANNFKQFGCNLEFVTDRSGEGTQFVKGFGGIGGILRWKVDF--VELSNFEDAAGKDHAKGGNDDEDE 443
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1080.4.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIB3_ECTSI3.880e-14576.31Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A836CQL8_9STRA6.070e-14375.70Eukaryotic peptide chain release factor subunit 1 ... [more]
F0Y084_AURAN1.510e-13172.63Eukaryotic peptide chain release factor subunit 1 ... [more]
F0YK48_AURAN2.580e-13073.36Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A8J2SAF2_9STRA1.480e-12973.09Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A7S2UVJ2_9STRA1.830e-12974.63Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A7S2F8Y1_9STRA4.240e-12773.23Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A7S3MEB0_9STRA2.500e-12567.82Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A7S1GJV0_CYCTE5.380e-12569.09Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A1Z5JEK5_FISSO7.110e-12567.93Eukaryotic peptide chain release factor subunit 1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1080contigP-wetherbeei_contig1080:4036..7837 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIB3
Preferred nameETF1
PFAMseRF1_1,eRF1_2,eRF1_3
Model size1969
Max annot lvl2759|Eukaryota
KEGG koko:K03265,ko:K04043
KEGG TC1.A.33.1
KEGG Pathwayko03015,ko03018,ko04212,ko05152,map03015,map03018,map04212,map05152
Hectar predicted targeting categorysignal peptide
GOsGO:0000184,GO:0000956,GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003747,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006401,GO:0006402,GO:0006412,GO:0006415,GO:0006417,GO:0006449,GO:0006464,GO:0006479,GO:0006518,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0008022,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0008213,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010605,GO:0010608,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016149,GO:0018130,GO:0018444,GO:0019222,GO:0019438,GO:0019439,GO:0019538,GO:0022411,GO:0023052,GO:0031323,GO:0031326,GO:0032259,GO:0032268,GO:0032774,GO:0032984,GO:0032991,GO:0034248,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035770,GO:0036211,GO:0036464,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043412,GO:0043414,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051246,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990825,GO:1990904,GO:2000112
Exons8
Evalue1.03e-150
EggNOG OGsCOG1503@1|root,KOG0688@2759|Eukaryota
Ec32 ortholog descriptioneukaryotic peptide chain release factor 1
Ec32 orthologEc-11_001250.1
Descriptiontranslation release factor activity
Cds size912
COG categoryJ
BRITEko00000,ko00001,ko03012,ko03019,ko03029,ko03110,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1080.4.3prot_P-wetherbeei_contig1080.4.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1080 4954..7698 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185885.2036178-UTR-P-wetherbeei_contig1080:4035..49531683185885.2036178-UTR-P-wetherbeei_contig1080:4035..4953Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1080 4036..4953 -
1683185885.293573-UTR-P-wetherbeei_contig1080:7698..78371683185885.293573-UTR-P-wetherbeei_contig1080:7698..7837Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1080 7699..7837 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185885.2131624-CDS-P-wetherbeei_contig1080:4953..51691683185885.2131624-CDS-P-wetherbeei_contig1080:4953..5169Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1080 4954..5169 -
1683185885.2205374-CDS-P-wetherbeei_contig1080:5440..55671683185885.2205374-CDS-P-wetherbeei_contig1080:5440..5567Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1080 5441..5567 -
1683185885.2359786-CDS-P-wetherbeei_contig1080:5773..58631683185885.2359786-CDS-P-wetherbeei_contig1080:5773..5863Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1080 5774..5863 -
1683185885.2432885-CDS-P-wetherbeei_contig1080:6068..61001683185885.2432885-CDS-P-wetherbeei_contig1080:6068..6100Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1080 6069..6100 -
1683185885.2505023-CDS-P-wetherbeei_contig1080:6376..64571683185885.2505023-CDS-P-wetherbeei_contig1080:6376..6457Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1080 6377..6457 -
1683185885.2630072-CDS-P-wetherbeei_contig1080:6785..69111683185885.2630072-CDS-P-wetherbeei_contig1080:6785..6911Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1080 6786..6911 -
1683185885.2734106-CDS-P-wetherbeei_contig1080:7307..73671683185885.2734106-CDS-P-wetherbeei_contig1080:7307..7367Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1080 7308..7367 -
1683185885.2832267-CDS-P-wetherbeei_contig1080:7518..76981683185885.2832267-CDS-P-wetherbeei_contig1080:7518..7698Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1080 7519..7698 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1080.4.3

>prot_P-wetherbeei_contig1080.4.3 ID=prot_P-wetherbeei_contig1080.4.3|Name=mRNA_P-wetherbeei_contig1080.4.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=304bp
MCVMWGAFGVFFAVWWLQGSTRDILHKFSVELPKKHGRGGQSALRFARLR
LEKRHNYIRKVAELAVTMFITDNKCNCRGLILAGSAEFKNELMTSDLFDP
RLRKAVIKTVDVSYGGEAGFNQAIELSAEALGQVKLIREKRLLQQASAQY
FEEISQDTGEYCFMVDDTLKALELGAVETLICWDNLNIDRLQLRNNATGA
EKVLHLRPEQEANESLFRDADTGTELETIEKQPLVEWIANNYKRFGCTLE
FVTDRSQEGSQFCRGFGGIGGLLRWRVDFAGMDESNHDAAGGEGGSEDEW
EGF*
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mRNA from alignment at P-wetherbeei_contig1080:4036..7837-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1080.4.3 ID=mRNA_P-wetherbeei_contig1080.4.3|Name=mRNA_P-wetherbeei_contig1080.4.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3802bp|location=Sequence derived from alignment at P-wetherbeei_contig1080:4036..7837- (Phaeothamnion wetherbeei SAG_119_79)
CCAAGCGGCGCTGCTTTTGTTTCGCTGCACCTAGCAGCTGAAGGTCCCAT
CTGAGCATGGTTCCTGCTTCTTCCCATGTCGCGTTTTTCACCGTCGATTT
GGATCATCTCGCTCCACTGCTCTGCACGCCATCGTGCGGATGTGCGTGAT
GTGGGGCGCTTTTGGCGTGTTCTTCGCTGTATGGTGGTTGCAGGGGTCGA
CTCGGGATATCCTTCACAAGTTCAGCGTTGAGCTGCCGAAGAAGCACGGG
CGCGGCGGGCAGTCCGCCCTCCGTTTCGCGCGCCTGCGGCTCGAAAAACG
CCACAACTACATCCGAAAGGTGCGTTGGCCGAAAGTTGCGACAGTTTTGT
CGGTGTCGGGGCGGTTTCGGCTGCGTTTGACGATACTTCTACGTCGACAG
CTCCGCTTAGAACAACTGACAAACGTATGCTGACACTCATCATATTCCTC
TGCTTAGCCCATCACGGCAGGTGGCAGAGCTGGCTGTCACCATGTTCATC
ACCGACAACAAGTGTAACTGCCGCGGCTTGGTAAGCTGAACAAGACGTCC
TTGGTACGGCTGCTGGTTATTGCTACCCGTTCCATTGCGTCGGTTCGGTT
CCATGCTTTGACAACCGGTGGTATCTTTATAGGATTTTGGCTTCTTTCTT
TACAACGCCTTTTTCTCTTATTGTACGGTCACGGCATTCCTCCTGGCATA
GTACAAAACTCTCTGTATACCTCTCTACCTATGGCGGCTGAGGCAACTGG
CGGCTCGGTTGCCTTGGCGGTGGCAACGTGGCATCGGCGGCATCTTACGA
CTGCTATTGCCGCTAAAACTGCGGGCCGTTACAACTACGGCGTTTTTGTG
GCGACCGCGAATGTGCGGCGGCTGGCGTTGTCTGCGGCGTCGGCCCTGGG
TTATGACCTGGCTGTCCCGGCGGCAGATCCTGGCGGGTAGCGCCGAGTTC
AAGAACGAGCTGATGACGAGTGACCTGTTCGACCCGCGCCTAAGGAAGGC
CGTCATCAAGACGGTCGACGTCTCGTATGGCGGAGAGGCCGGCTTCAACC
AGGTGTGAATAATGTGCACTTCTGAAGTCGCTGCACCTGCGTTTCCGTCG
CGTTGCTGTTTGCTATGCTGTGTTTTAGGTTACGTCAGGTTGGGGAGGGG
TGCTCCTGCGGCATAAGTGTTTGTTTGGCCACAGTGTTACCCGCGTGGAC
CCAGAAGACTTTCTTGACCCGGTCTTGTCTCTGCGTTCCTTGCAACCTTT
GCAACAACCCCCATACAGTCTGATGTCCAGATCGCTGAGTTCGAAGCAAA
GCGCACCTTCATCTCACCCTTACTGTCTCCTCCGTTGCCTTCTATTTTCT
TCTTGGGTCGAATGCGGAATCGATGCACAGGCGATCGAGCTGTCGGCGGA
GGCGCTCGGGCAGGTAAAGCTCATCCGGGAGAAGAGACTGCTGCAGCAGG
CAAGTGCCCAAGTAACGTCACGAATTCCCTGCGGACTTGTTTTGCTGGCC
TTTAAGGGACCTGCCCGGCCATGAGGGTGCTGCGATACACTACCTGCATT
TGTCGGGTCTCTGAACAGATATATGCGGCGTTCAGACGCAACGGGAGGCT
CTTACCCTAGGTTTACCCACCTGAGCTGGCGCGAGGCGTAATTCCAACCT
CTGGCCTCCTTTTTATCCCTGTTCTTTTCGTCCTCTTCTCCGCGTTGGTG
TTTCCTGTTTGTGACGATGCTGTGGCGGCCCCACCAGTACTTCGAGGAGA
TCAGCCAAGACACCGGTGAGTGCTGCGACCGTTTGCCAGCTTCTGTAGTC
CCCCTTTTGTGGCCCTTGTTGGCTCGGCGCTGGAACTTTTCTTTTCAATT
AACTGTGGGCGGAGCTGAGGCTTGACCTGAAACTGTTCCACCATGATTTA
CGTTCTGCCGGCTGACAGTTATCTCAAACCGCTTTCTTCATTGACCGCTT
GCCGTATCGGGAAACTGCAGGAAGATACTGCTTCATGGTGGACGACACGC
TGAAGGCCCTTGAGCTGGGCGCCGTCGAGACGCTCATCTGCTGGGACAAC
CTCAACATTGACCGGTCAGTCAATAACGAAACGGTTCGGTTAAGCGCTCG
GCGACGGCTCCCACGAACCGAAACCACAGCTGCTCACTTGTGTTTCTGTG
CTGTGCCTTTGTATTTCTCTTGCAGTTGCGTGTTTGAAGCTAGTGCGCTT
ATCCCTCTACTCTGCTGATCTTGCATAACAGTCTCCCCTTCTTCCCTTTC
TGCTACTCTTCCTGTTACAGATTGCAGTTGCGCAACAATGCCACTGGGGC
GGAGAAGGTGCTGCACCTGCGGCCGGAGCAGGAGGCCAACGAGAGCCTCT
TTCGCGACGCCGACACGGGCACCGAGCTCGAGACCATCGAGAAGCAGGTG
AGCAATGAGCTTATTTCCGTCCCTCGGATCTGTTAGTGTCTTGGTGCCTC
TCGACCAGGCGTTCTCTGCTATCCGCATCTTGCCCGGACCAGCAGCCGAA
GTAACCTCATTTCAGAAGCCTTTCTTGTTCAGGCACTTGTTCCGTCAACT
GGGGCCAAAGAGAGGCACCTCCTAGGTAGCATCACTTTTGCCGATCTTAT
CGCTGCGCTGACTGCTCACAAGCAACTTGTTTTGTTCTCCGATTCCATTG
CTACCCCACGCTTTGCAGCCGCTGGTAGAGTGGATTGCCAACAACTACAA
GCGCTTTGGCTGCACGCTCGAGTTCGTAACGGACAGAAGCCAGGAGGGCT
CGCAGTTCTGTCGCGGCTTTGGCGGCATCGGCGGCCTCCTCCGGTGGCGA
GTAGACTTCGCCGGCATGGACGAGTCCAACCACGACGCCGCCGGCGGCGA
GGGTGGTTCCGAGGACGAGTGGGAAGGCTTCTAAGCTCGCGGCTGCAAGC
GCGGCGGCGATGTGAAGCTGTAGTGTCTAGTGGCAGCAGAAGGGAAGGGC
TGCGCCAGGCGGCTGCTGCGGCTGCGGCGACTGCGTCGAAGCGGCGGCGG
GATGCCGTGGCAGCGATGTGGAGCTGGCGGCGAAACCGGCGGCGGTGGCA
GCGGCGACGAAGCAGGGCGGCAGCTGCCACGGTGGGCATCGACTGAGAAC
CTTGACGGTGGCAGGCCAAATGCCAGCAGGCGGGCCGTCGAAAAGCGCCA
CCGCCGCGTCGCCGCGGCCTGGCATGGCCGAGTATCGGCTCGGTCTGATG
TTCGCTGAGAGCGGCTCCTCCGACCGGTGGCTGCATCTAGATGCGGAGTG
AATGTGGGCGGGGAGCGCGGCGAACGGCAAGCGTACACGCGGCGTCTGCG
TCCAGATGGGCCGCCGCGAGGCGCAGCGCTTCTTGCGTGGCGTTGGGGGC
CGCGTATTGCGGAGGGCCGTTTGTACCGCAGCTACGAAAGCGTATGTCGA
TGGTCGTCCGAAATCTGTTCAGAGCGGCGGCGTGGACCCTAGGCCGCCAG
CGGGCGGGTCGGGACGGCTGTAAGAACGACTGGGCGCCGCCTTGGAGGCG
GCGGTCGTCGTTAAATCGGGGCCCGTCCTGCTTGCGGCGGGTGGCGTCAC
ATGGATGCAAGAAGAGCATCTCGGCACCTTTTTCGATGCAGCGTTGAGAG
AGGTCTCAGCAGGGCAGGGGCAGGTCCCATAATAAATCCACGGCAGCCTA
TGGACCCACTCTGTTCAGTGAGAGCCCAGTGCTTGAGAGAAGCCAGCTTA
TAAAAGTTGCCACACGGACGTCCGGACACATCGCCGCTCACCTTACTCAA
GCAAGCCATCTCTTTCGAGAGAGCTCAAACCAGTCAAGCAAAAAATGCGC
TG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1080:4036..7837-

>mRNA_P-wetherbeei_contig1080.4.3 ID=mRNA_P-wetherbeei_contig1080.4.3|Name=mRNA_P-wetherbeei_contig1080.4.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=912bp|location=Sequence derived from alignment at P-wetherbeei_contig1080:4036..7837- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGCGTGATGTGGGGCGCTTTTGGCGTGTTCTTCGCTGTATGGTGGTT
GCAGGGGTCGACTCGGGATATCCTTCACAAGTTCAGCGTTGAGCTGCCGA
AGAAGCACGGGCGCGGCGGGCAGTCCGCCCTCCGTTTCGCGCGCCTGCGG
CTCGAAAAACGCCACAACTACATCCGAAAGGTGGCAGAGCTGGCTGTCAC
CATGTTCATCACCGACAACAAGTGTAACTGCCGCGGCTTGATCCTGGCGG
GTAGCGCCGAGTTCAAGAACGAGCTGATGACGAGTGACCTGTTCGACCCG
CGCCTAAGGAAGGCCGTCATCAAGACGGTCGACGTCTCGTATGGCGGAGA
GGCCGGCTTCAACCAGGCGATCGAGCTGTCGGCGGAGGCGCTCGGGCAGG
TAAAGCTCATCCGGGAGAAGAGACTGCTGCAGCAGGCAAGTGCCCAATAC
TTCGAGGAGATCAGCCAAGACACCGGTGAATACTGCTTCATGGTGGACGA
CACGCTGAAGGCCCTTGAGCTGGGCGCCGTCGAGACGCTCATCTGCTGGG
ACAACCTCAACATTGACCGATTGCAGTTGCGCAACAATGCCACTGGGGCG
GAGAAGGTGCTGCACCTGCGGCCGGAGCAGGAGGCCAACGAGAGCCTCTT
TCGCGACGCCGACACGGGCACCGAGCTCGAGACCATCGAGAAGCAGCCGC
TGGTAGAGTGGATTGCCAACAACTACAAGCGCTTTGGCTGCACGCTCGAG
TTCGTAACGGACAGAAGCCAGGAGGGCTCGCAGTTCTGTCGCGGCTTTGG
CGGCATCGGCGGCCTCCTCCGGTGGCGAGTAGACTTCGCCGGCATGGACG
AGTCCAACCACGACGCCGCCGGCGGCGAGGGTGGTTCCGAGGACGAGTGG
GAAGGCTTCTAA
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