mRNA_P-wetherbeei_contig20640.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20640.1.1 vs. uniprot
Match: D7FM30_ECTSI (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM30_ECTSI) HSP 1 Score: 212 bits (540), Expect = 1.130e-61 Identity = 121/256 (47.27%), Postives = 150/256 (58.59%), Query Frame = 1
Query: 1 DIHVPPVFWPYTTRRVLTMEFVRGAKITHVDELQRDGLDPVAVARTVAAAFGDMIFLHGFVHCDPHPGNLMVRPRVRAA-AEANAKGWFSWLRRLLLGSGRDIARVSEARSPPAGGEAAXXXXGAVAVGGVAAMPGRRVPHEVVLLDHGMYRRLDPGFRHAYCRLWKAFVTRDAELGRRTAVELGLAPDMYEALSL---------------------RRALRDKYRAILSAEAVNAFLESLPRDMLFVMRTGDLVR 702
++ VP + W ++RRVLTM+FV G KI+ + ++R G+DP VARTV FGDMI+ HGF+HCDPHPGNLMVRP+ + A+A A+G ARS AA V H+VVLLDHGMYRRLDP FR Y +LWKAF+TRD LG R AV+LG+ P +Y+ALSL R+AL KY+ ILS +++NAFLE LPRDMLFVMRT DLVR
Sbjct: 246 NVFVPSIHWDLSSRRVLTMDFVHGLKISDREGIERRGMDPTGVARTVTRTFGDMIYCHGFLHCDPHPGNLMVRPKPSSRNAKAAARG--------------TAESEGAARS--------------------AAPKRNSVAHQVVLLDHGMYRRLDPDFRLTYSKLWKAFMTRDTALGERCAVDLGVEPGLYDALSLILTWRPTSTTARTGQRITEEERQALVAKYKVILSHDSLNAFLERLPRDMLFVMRTSDLVR 467
BLAST of mRNA_P-wetherbeei_contig20640.1.1 vs. uniprot
Match: A0A2R5GPD9_9STRA (ABC1 family protein MCP2-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPD9_9STRA) HSP 1 Score: 200 bits (508), Expect = 2.030e-57 Identity = 111/243 (45.68%), Postives = 152/243 (62.55%), Query Frame = 1
Query: 1 DIHVPPVFWPYTTRRVLTMEFVRGAKITHVDELQRDGLDPVAVARTVAAAFGDMIFLHGFVHCDPHPGNLMVRPRVRAAAEANAKGWFSWLRRLLLGSGRDIARVSEARSPPAGGEAAXXXXGAVAVGGVAAMPGRRV---------PHEVVLLDHGMYRRLDPGFRHAYCRLWKAFVTRDAELGRRTAVELGLAPDMYEALSLRRALRDKYRAILSAEAVNAFLESLPRDMLFVMRTGDLVR 702
D++VP + W +++RR+L ME+V G KI+ VDE G+ P+ VA TV++ FGDMI +HGFVHCDPHPGNL VR + +N G+ S + L+ G+ A + P A G ++ VAA +RV P++VV+LDHGMYRRLDP FR YC LWKA + RDA LGR A+ LG++ D Y+ R L+DKY+ + +A +N FLESLPRD+LFVMR+ ++VR
Sbjct: 254 DVYVPKIIWKHSSRRMLIMEYVEGVKISKVDEFAAQGIHPLEVATTVSSLFGDMIHVHGFVHCDPHPGNLFVRKAPERSVWSNF-GFVSTVSLLVAGASTLYAAPLIGPAAPLAALALTSAGGLSSL--VAAYKAQRVKTFGGKQGVPYQVVVLDHGMYRRLDPSFRKNYCMLWKALLLRDANLGRTAAMNLGVSKDAYD----RAKLKDKYKDV-NAGDINKFLESLPRDLLFVMRSTNIVR 488
BLAST of mRNA_P-wetherbeei_contig20640.1.1 vs. uniprot
Match: A0A835ZCM7_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCM7_9STRA) HSP 1 Score: 193 bits (490), Expect = 4.750e-54 Identity = 117/292 (40.07%), Postives = 148/292 (50.68%), Query Frame = 1
Query: 1 DIHVPPVFWPYTTRRVLTMEFVRGAKITHVDELQRDGLDPVAVARTVAAAFGDMIFLHGFVHCDPHPGNLMVR--PRVRAAAEANAKGWFSWLRRLLLGSGRDIARVSEARSPPAGGEAAXXXXGAVAVGGVAAMPGRRVPHEVVLLDHGMYRRLDPGFRHAYCRLWKAFVTRDAELGRRTAVELGLAPDMYEALSL---------------------RRALRDKYRAILSAE-----------------------------------AVNAFLESLPRDMLFVMRTGDLVR 702
DI VP V W Y+TRRV+TM+F+ G KIT+ ++ GLDP VA+TVA++FG+MI+ HGF+HCDPHPGNLMVR P + ++ + A+ P H+VVLLDHGMYRRL+P FR AYCRLWKAF+TRD +LG++ AV LGL PD Y+ALSL R LR+KY+ ++SA AVN FLE LPRDMLFV+RT DL+R
Sbjct: 286 DIAVPKVHWDYSTRRVMTMDFIHGIKITNRQAIEEAGLDPRQVAKTVASSFGEMIYYHGFLHCDPHPGNLMVREMPATKTGRKSRS-----------------------AKKPK--------------------------QHQVVLLDHGMYRRLEPDFRLAYCRLWKAFLTRDTKLGKQQAVILGLTPDEYDALSLVLTWRPATTKTPMGTRITEEERARLREKYKGVVSAXXXXXXXXXXXXXXXXAQAEXXXXXXXXXXXXXXXXAVNNFLERLPRDMLFVLRTSDLIR 528
BLAST of mRNA_P-wetherbeei_contig20640.1.1 vs. uniprot
Match: A0A0G4GUZ7_VITBC (ABC1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GUZ7_VITBC) HSP 1 Score: 180 bits (456), Expect = 7.130e-49 Identity = 103/256 (40.23%), Postives = 138/256 (53.91%), Query Frame = 1
Query: 1 DIHVPPVFWPYTTRRVLTMEFVRGAKITHVDELQRDGLDPVAVARTVAAAFGDMIFLHGFVHCDPHPGNLMVRPRVRAAAEANAKGWFSWLRRLLLGSGRDIARVSEARSPPAGGEAAXXXXGAVAVGGVAAMPGRRVPHEVVLLDHGMYRRLDPGFRHAYCRLWKAFVTRDAELGRRTAVELGLAPDMYEALSL----------------------RRALRDKYRAILSAEAVNAFLESLPRDMLFVMRTGDLVR 702
D+HVP V W TT RVLTMEF++G K+T D L++ G+ P VA V FG M+ +HGFVHCDPHPGNLMVRP G D + +E SPP G V ++V+LDHGMYRRL+P FRHAY RLWKA V +D +GR+ V+L L D ++ LSL R+ +++K++ +AEA+N FL+SLPRD+L++ RT ++VR
Sbjct: 278 DVHVPKVDWTLTTPRVLTMEFIKGLKVTDKDALEKAGIHPKDVAHLVCEVFGQMMHIHGFVHCDPHPGNLMVRPM-----------------------GADSSGAAEG-SPPKG-----------------------VRPQLVVLDHGMYRRLEPSFRHAYSRLWKALVMQDEHVGRQACVDLNLDEDAFDMLSLILTFRPTKSKFTKLGQRMHEEDRKVVKEKFKKT-TAEAINDFLKSLPRDILYIFRTTNIVR 485
BLAST of mRNA_P-wetherbeei_contig20640.1.1 vs. uniprot
Match: A0A7S2RKL7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RKL7_9STRA) HSP 1 Score: 176 bits (445), Expect = 8.640e-48 Identity = 101/270 (37.41%), Postives = 153/270 (56.67%), Query Frame = 1
Query: 1 DIHVPPVFWPYTTRRVLTMEFVRGAKITHVDELQRDGLDPVAVARTVAAAFGDMIFLHGFVHCDPHPGNLMVRPRVRAAAEANAKGWFSWLRRLLLGSGRDIARVSEARSPPAGGEA---AXXXXGAVAVGGVAAM-----PGRRVP--------HEVVLLDHGMYRRLDPGFRHAYCRLWKAFVTRDAELGRRTAVELGLAPDMYEALSL-----------------RRALRDKYRAI---LSAEAVNAFLESLPRDMLFVMRTGDLVR 702
D++VP + WP TT+R+L ME+V G KIT +D L+ G++P+ VA TV+A FGDMI +HGF HCDPHPGNLM+RP + SW L + +A V+ + P A A A G + ++ +++ +++V+LDHGMYRR +P FR YC+LW++ + D + G++ A++LG+ D Y+ LSL ++A R+K RA +SA +N FL++LPRD+LFV+R ++VR
Sbjct: 262 DVYVPRIHWPLTTKRMLIMEYVHGDKITDLDSLEDKGINPLEVAATVSAVFGDMIHVHGFAHCDPHPGNLMIRPAPKPKLFDTMYAKLSWTCFLTV----PVAMVAATIAGPGSIVAYYGAATALAATVTGEIVSLLSADENSKKISNGGKNGEAYQLVILDHGMYRRFEPEFRTTYCQLWQSLLMADIKHGKQAAIKLGVPSDGYDVLSLIFTHRPANSQTKIGKRMQKAEREKMRAQFKDVSAADINVFLQNLPRDLLFVLRCTNIVR 527
BLAST of mRNA_P-wetherbeei_contig20640.1.1 vs. uniprot
Match: A0A4D9CRE9_9STRA (ABC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRE9_9STRA) HSP 1 Score: 166 bits (419), Expect = 5.860e-44 Identity = 100/256 (39.06%), Postives = 130/256 (50.78%), Query Frame = 1
Query: 4 IHVPPVFWPYTTRRVLTMEFVRGAKITHVDELQRDGLDPVAVARTVAAAFGDMIFLHGFVHCDPHPGNLMVRPRVRAAAEANAKGWFSWLRRLLLGSGRDIARVSEARSPPAGGEAAXXXXGAVAVGGVAAMPGRRVPHEVVLLDHGMYRRLDPGFRHAYCRLWKAFVTRDAELGRRTAVELGLAPDMYEALSL---------------------RRALRDKYR--AILSAEAVNAFLESLPRDMLFVMRTGDLVR 702
IH+P V W ++ RVLTMEF+ G K+T V L+ G+DP AV T++ F M+F G VHCDPHPGNL++R +A ++W + LLG R EVVLLDHG+YRRLD FR +YC LWKAFVTRDA LGR +GL D +E LS+ R+ +R+KYR + AE + +ESLPRD+LFV+R+ LVR
Sbjct: 274 IHIPRVRWDLSSARVLTMEFIDGVKVTDVGRLKASGIDPRAVGETISNLFSLMVFSLGLVHCDPHPGNLLIR---HPPPPPSAPRRWAWRLQGLLGL--------------------------------------RPNFEVVLLDHGLYRRLDESFRQSYCNLWKAFVTRDAGLGRAATRAMGLDEDFFELLSIISVNRTPTSRNGLGEQMSESERKRIREKYRDRSKYGAEQLKKLIESLPRDVLFVLRSNSLVR 488
BLAST of mRNA_P-wetherbeei_contig20640.1.1 vs. uniprot
Match: A0A5A8DZP4_CAFRO (ABC1 domain-containing protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8DZP4_CAFRO) HSP 1 Score: 156 bits (395), Expect = 3.450e-40 Identity = 95/248 (38.31%), Postives = 128/248 (51.61%), Query Frame = 1
Query: 4 IHVPPVFWPYTTRRVLTMEFVRGAKITHVDELQRDGLDPVAVARTVAAAFGDMIFLHGFVHCDPHPGNLMVRPRVRAAAEANAKGWFSWLRRLLLGSGRDIARVSEARSPPAGGEAAXXXXGAVAVGGVAAMPGRRVPH--EVVLLDHGMYRRLDPGFRHAYCRLWKAFVTRDAELGRRTAVELGLAPDMYEALSLR-------RALRDKYRAILS------AEAVNAFLESLPRDMLFVMRTGDLVR 702
+H+P + W T+ RV+ ME++ G K T ++++ GL P VA T F DMIFLHG VH DPHPGNL+VR AA A+ S L SG + R ++ P A A+ G+R ++V+LDHGMYRRL P FR AYC LW+A + RD ELGRR A+++GL Y+ALSL R ++K + + E + +PRD FV R LVR
Sbjct: 285 VHIPAIRWDLTSERVMAMEWIDGVKPTSLEKVTAMGLRPQEVAETACTVFADMIFLHGMVHTDPHPGNLLVR-----AAPADGARTRSLSHGLWPDSGPGVGRDADKPRPAAD----------------PALVGQRPSQAWQLVVLDHGMYRRLSPSFRQAYCALWEALMLRDEELGRRAAIQMGLEGQAYDALSLMLTYRTGTRGSKEKLQQTMKNLANSPKEKQQEMIREMPRDFFFVSRNLSLVR 511
BLAST of mRNA_P-wetherbeei_contig20640.1.1 vs. uniprot
Match: A0A7S0IIF7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IIF7_9EUKA) HSP 1 Score: 140 bits (354), Expect = 5.090e-36 Identity = 98/255 (38.43%), Postives = 116/255 (45.49%), Query Frame = 1
Query: 1 DIHVPPVFWPYTTRRVLTMEFVRGAKITHVDELQRDGLDPVAVARTVAAAFGDMIFLHGFVHCDPHPGNLMVRPRVRAAAEANAKGWFSWLRRLLLGSGRDIARVSEARSPPAGGEAAXXXXGAVAVGGVAAMPGRRVPHEVVLLDHGMYRRLDPGFRHAYCRLWKAFVTRDAELGRRTAVELGLAPDMYEALSL---------------------RRALRDKYRAILSAEAVNAFLESLPRDMLFVMRTGDLVR 702
+HVP V + RRVLTME++ G K+T D L R + A ++ AF MIF GFVHCDPH GNL+ R RA GG A ++VLLDHGMYRRL FR YCRLW A + RDA GR A LG+ D YE LSL R+A+R +YR+ +AE VN FL LPRDMLFVMRT LVR
Sbjct: 134 QLHVPEVVEHLSGRRVLTMEWIDGVKLTDADGLARRAIRGSECAALLSQAFSAMIFEFGFVHCDPHAGNLLARRMPRAQ----------------------------------GGRA-----------------------QLVLLDHGMYRRLSANFRSEYCRLWMALLARDAREGRAAARALGVEADDYETLSLLLTHRPPDSTAPTGSNMSAAERQAVRARYRSYGAAE-VNTFLHRLPRDMLFVMRTWSLVR 330
BLAST of mRNA_P-wetherbeei_contig20640.1.1 vs. uniprot
Match: A0A0G4FH32_9ALVE (ABC1 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FH32_9ALVE) HSP 1 Score: 144 bits (363), Expect = 6.400e-36 Identity = 92/255 (36.08%), Postives = 121/255 (47.45%), Query Frame = 1
Query: 4 IHVPPVFWPYTTRRVLTMEFVRGAKITHVDELQRDGLDPVAVARTVAAAFGDMIFLHGFVHCDPHPGNLMVRPRVRAAAEANAKGWFSWLRRLLLGSGRDIARVSEARSPPAGGEAAXXXXGAVAVGGVAAMPGRRVPHEVVLLDHGMYRRLDPGFRHAYCRLWKAFVTRDAELGRRTAVELGLAPDMYEALSL----------------------RRALRDKYRAILSAEAVNAFLESLPRDMLFVMRTGDLVR 702
++VP + W TT RVLTMEFVRG KI + L+ + VA ++ FGDM+ HGFVHCDPHPGN++VRP E RS G VP ++VLLDHGMYRRL P FR YC+LW+A VT+D +GR A+ LGL +E LSL R+ RD + + + +N FL LPRD+L+V+R ++VR
Sbjct: 310 VYVPKIEWDLTTDRVLTMEFVRGVKINDKEGLKNMDVKGSEVAPLLSEVFGDMMHFHGFVHCDPHPGNILVRP----------------------------LPSRERRSD-----------------------GSAVP-QIVLLDHGMYRRLTPDFRKGYCQLWEALVTQDESVGREAAIRLGLDERGFELLSLVFTFRSSKSKRTRLGSRMHDEDRQRARDSIQGTTAGD-INEFLRGLPRDVLWVLRATNIVR 511
BLAST of mRNA_P-wetherbeei_contig20640.1.1 vs. uniprot
Match: A0A8K1CAQ0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAQ0_PYTOL) HSP 1 Score: 135 bits (341), Expect = 1.530e-33 Identity = 84/254 (33.07%), Postives = 121/254 (47.64%), Query Frame = 1
Query: 1 DIHVPPVFWPYTTRRVLTMEFVRGAKITHVDELQRDGLDPVAVARTVAAAFGDMIFLHGFVHCDPHPGNLMVRPRVRAAAEANAKGWFSWLRRLLLGSGRDIARVSEARSPPAGGEAAXXXXGAVAVGGVAAMPGRRVPHEVVLLDHGMYRRLDPGFRHAYCRLWKAFVTRDAEL----GRR--------------TAVELGLAPDMYEALSL--RRALRDKYRAILSAEAVNAFLESLPRDMLFVMRTGDLVR 702
++HVP V+ +++R+L MEF+ KI++V++L+ + +DP VAR + FG+M+F HGFVHCDPHPGN+ VR A A + + ++VLLDHG+YR LD FR YC LW+A + RD++L GRR T LG + +SL R L ++ R L VN F++ LPRDMLFV RT +++R
Sbjct: 241 NVHVPIVYDDISSKRLLVMEFIDAPKISNVEKLKEESIDPSEVARVLCEVFGEMVFCHGFVHCDPHPGNIFVRKNPNANATSKS--------------------------------------------------------QLVLLDHGLYRHLDEDFRKTYCDLWRAMILRDSDLLQDCGRRLNAGPFTTYLPLLFTYRPLGSNTPLASKMSLDEREKLTEELRK-LQVTDVNGFIQHLPRDMLFVFRTNNMIR 437 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20640.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20640.1.1 >prot_P-wetherbeei_contig20640.1.1 ID=prot_P-wetherbeei_contig20640.1.1|Name=mRNA_P-wetherbeei_contig20640.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=234bp DIHVPPVFWPYTTRRVLTMEFVRGAKITHVDELQRDGLDPVAVARTVAAAback to top mRNA from alignment at P-wetherbeei_contig20640:2..1207- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20640.1.1 ID=mRNA_P-wetherbeei_contig20640.1.1|Name=mRNA_P-wetherbeei_contig20640.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1206bp|location=Sequence derived from alignment at P-wetherbeei_contig20640:2..1207- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20640:2..1207- >mRNA_P-wetherbeei_contig20640.1.1 ID=mRNA_P-wetherbeei_contig20640.1.1|Name=mRNA_P-wetherbeei_contig20640.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=702bp|location=Sequence derived from alignment at P-wetherbeei_contig20640:2..1207- (Phaeothamnion wetherbeei SAG_119_79)back to top |