mRNA_P-wetherbeei_contig2063.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2063.2.2 vs. uniprot
Match: A0A835YRM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM7_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.320e-37 Identity = 72/116 (62.07%), Postives = 91/116 (78.45%), Query Frame = 2
Query: 560 VTELRKALPEGTTARVVKNKLMRIAAADT-QFKAVEGDLTKGENMWFFVQDDLKGSLELAKKFAKDINKMDTHLPRYGVIDGGAVDAEAIEKLSQLPSKKELYQRIASSIKAVPTK 904
VT++RK LP GT ARVVKNKLMR+A Q++AV GD+TKGENMWFFV+DDL S+ +AK F K +NK DTH P++GV++G A+DA +E +S LPSK ELY+RIA +KAVPTK
Sbjct: 83 VTDMRKKLPAGTKARVVKNKLMRLAVEGAPQWEAVVGDMTKGENMWFFVEDDLSESITVAKDFIKVVNKKDTHAPKFGVLEGKALDAAGVEAISNLPSKTELYRRIAVGVKAVPTK 198
BLAST of mRNA_P-wetherbeei_contig2063.2.2 vs. uniprot
Match: A0A448Z550_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z550_9STRA) HSP 1 Score: 112 bits (279), Expect = 6.780e-25 Identity = 54/112 (48.21%), Postives = 74/112 (66.07%), Query Frame = 2
Query: 569 LRKALPEGTTARVVKNKLMRIAAADTQFKAVEGDLTKGENMWFFVQDDLKGSLELAKKFAKDINKMDTHLPRYGVIDGGAVDAEAIEKLSQLPSKKELYQRIASSIKAVPTK 904
LR+++PEGTT VVKN LM A DT+F+ L KG NMWFF+++D+ S++ F K+ K +TH GV++G DA+ +E + +LPSKKELY +IA I AVPTK
Sbjct: 80 LRRSMPEGTTISVVKNTLMNRAVKDTEFEEAASSLLKGANMWFFIEEDIGASIKAWNAFTKETGKKETHGIIGGVVEGNNYDAKGVEAIGKLPSKKELYAKIAGGINAVPTK 191
BLAST of mRNA_P-wetherbeei_contig2063.2.2 vs. uniprot
Match: A0A7S4EQC8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EQC8_9STRA) HSP 1 Score: 110 bits (274), Expect = 3.220e-24 Identity = 56/125 (44.80%), Postives = 79/125 (63.20%), Query Frame = 2
Query: 539 LAAGRRQVTE---LRKALPEGTTARVVKNKLMRIAAADTQFKAVEGDLTKGENMWFFVQDDLKGSLELAKKFAKDINKMDTHLPRYGVIDGGAVDAEAIEKLSQLPSKKELYQRIASSIKAVPTK 904
+ AG V E LR+++PEGTT VVKN LMR A T+++ L KG NMWFF+++D+ S++ F K+ K +TH G+++G DA IE + +LPSKKELY +IA+ + AVPTK
Sbjct: 65 VPAGEVTVAESQTLRRSMPEGTTISVVKNTLMRRATEGTEYEEATAPLLKGPNMWFFIEEDIGASIKAWNAFTKEAAKTETHSINGGIVEGTNYDAAGIEAIGKLPSKKELYAKIAAGVNAVPTK 189
BLAST of mRNA_P-wetherbeei_contig2063.2.2 vs. uniprot
Match: A0A1Z5K7S4_FISSO (Large subunit ribosomal protein L10 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7S4_FISSO) HSP 1 Score: 107 bits (266), Expect = 4.280e-23 Identity = 53/116 (45.69%), Postives = 77/116 (66.38%), Query Frame = 2
Query: 557 QVTELRKALPEGTTARVVKNKLMRIAAADTQFKAVEGDLTKGENMWFFVQDDLKGSLELAKKFAKDINKMDTHLPRYGVIDGGAVDAEAIEKLSQLPSKKELYQRIASSIKAVPTK 904
++ +LR+++PEGTT +VVKN LM A T ++ LT G N+WFF++DD+ +++ F KD K DTH GV +G + D + +E + +LPSK+ELY +IA SIKAVPTK
Sbjct: 77 EMQKLRRSMPEGTTVKVVKNTLMERAVEGTDYEVATSLLT-GANLWFFIEDDISATIKAYNGFLKDCGKKDTHPILGGVTEGISYDTKGVEAIGKLPSKQELYAKIAGSIKAVPTK 191
BLAST of mRNA_P-wetherbeei_contig2063.2.2 vs. uniprot
Match: B7G672_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G672_PHATC) HSP 1 Score: 105 bits (263), Expect = 4.750e-23 Identity = 53/116 (45.69%), Postives = 76/116 (65.52%), Query Frame = 2
Query: 557 QVTELRKALPEGTTARVVKNKLMRIAAADTQFKAVEGDLTKGENMWFFVQDDLKGSLELAKKFAKDINKMDTHLPRYGVIDGGAVDAEAIEKLSQLPSKKELYQRIASSIKAVPTK 904
Q LR+++P GTT ++VKNKLM A T + AV L +G N WFF+++D+ G+L+ F K+ K ++H GVI+G DA +E + +LPSK++LY +IA SIKAVPTK
Sbjct: 43 QTQALRRSMPSGTTVQIVKNKLMARAVEGTDY-AVATSLLQGANAWFFIEEDIGGTLKAYNAFLKNFGKRESHPILGGVIEGNTYDAAGVEAIGKLPSKQDLYAKIAGSIKAVPTK 157
BLAST of mRNA_P-wetherbeei_contig2063.2.2 vs. uniprot
Match: A0A6V2PHN8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PHN8_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.060e-22 Identity = 56/116 (48.28%), Postives = 77/116 (66.38%), Query Frame = 2
Query: 557 QVTELRKALPEGTTARVVKNKLMRIAAADTQFKAVEGDLTKGENMWFFVQDDLKGSLELAKKFAKDINKMDTHLPRYGVIDGGAVDAEAIEKLSQLPSKKELYQRIASSIKAVPTK 904
Q LR+ALPEGTT VVKN LM+ A T ++ V G+L KG NMWFFV++D+ GS++ F K+ K ++H+ GVI+G D+ + +S+LPSK EL +IA +I AVPTK
Sbjct: 75 QTQLLRRALPEGTTMSVVKNTLMQRAIEGTDYQ-VAGELLKGPNMWFFVEEDIGGSIKAFNAFTKENGKTESHMVLGGVIEGVVYDSAGVTAISKLPSKLELIAQIAGAINAVPTK 189
BLAST of mRNA_P-wetherbeei_contig2063.2.2 vs. uniprot
Match: K0STH8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STH8_THAOC) HSP 1 Score: 108 bits (269), Expect = 1.880e-22 Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = 2
Query: 557 QVTELRKALPEGTTARVVKNKLMRIAAADTQFKAVEGDLTKGENMWFFVQDDLKGSLELAKKFAKDINKMDTHLPRYGVIDGGAVDAEAIEKLSQLPSKKELYQRIASSIKAVPTK 904
QV LR++LPEGTTA+VVKNKLM A T+++ V ++ KG NMWFF+++D+ GS++ KKF KD ++H G I+G D +E++S+LPSK EL +IAS I+AVPTK
Sbjct: 197 QVQGLRRSLPEGTTAKVVKNKLMSRAIEGTEYEPVN-EMLKGANMWFFIEEDIGGSVKSWKKFVKDEALAESHSILGGNIEGTNYDTAGVEQISKLPSKIELITQIASRIQAVPTK 311
BLAST of mRNA_P-wetherbeei_contig2063.2.2 vs. uniprot
Match: A0A7S2ZLQ0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLQ0_9RHOD) HSP 1 Score: 106 bits (264), Expect = 1.930e-22 Identity = 56/118 (47.46%), Postives = 82/118 (69.49%), Query Frame = 2
Query: 554 RQVTELRKALPEGTTARVVKNKLMRIAAADTQFKAVEGDLTKGENMWFFVQD-DLKGSLELAKKFAKDINKMDTHLPRYGVIDGGAVDAEAIEKLSQLPSKKELYQRIASSIKAVPTK 904
++V+ELR +PE + A VKN L RIA AD+ + V GDLTKG N+W F ++ D+KG++E KKF K+ K +T+ GV++ D + +E LS+LPSK++LYQ+IA +I +VPTK
Sbjct: 112 KEVSELRNVIPENSCALAVKNTLFRIAIADSTWD-VAGDLTKGSNLWIFTEEADMKGTVEAIKKFNKEKKKEETNGISGGVMENTLYDGKGVEALSKLPSKQDLYQKIAIAINSVPTK 228
BLAST of mRNA_P-wetherbeei_contig2063.2.2 vs. uniprot
Match: A0A7S3LDP0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LDP0_9STRA) HSP 1 Score: 105 bits (261), Expect = 4.670e-22 Identity = 55/116 (47.41%), Postives = 75/116 (64.66%), Query Frame = 2
Query: 557 QVTELRKALPEGTTARVVKNKLMRIAAADTQFKAVEGDLTKGENMWFFVQDDLKGSLELAKKFAKDINKMDTHLPRYGVIDGGAVDAEAIEKLSQLPSKKELYQRIASSIKAVPTK 904
Q +LR+++PEGTT +V+KNKLM A T + LT G NMWFFV++D+ +++ K F K+ K DTH GV+D DA ++ + LPSK+ELY +IA SIKAVPTK
Sbjct: 112 QSQKLRQSMPEGTTVKVIKNKLMARAIEGTDYTEASQMLT-GANMWFFVEEDISATIKAYKAFIKETGKKDTHDIFGGVMDQTYYDASGVDAIGNLPSKQELYAKIAGSIKAVPTK 226
BLAST of mRNA_P-wetherbeei_contig2063.2.2 vs. uniprot
Match: A0A7S1E238_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E238_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.820e-21 Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 2
Query: 569 LRKALPEGTTARVVKNKLMRIAAADTQFKAVEGDLTKGENMWFFVQDDLKGSLELAKKFAKDINKMDTHLPRYGVIDGGAVDAEAIEKLSQLPSKKELYQRIASSIKAVPTK 904
LR++LPEGTTA VVKN LM A + T ++ +L KG +MWFF++DD+ S++ F K+ + M++H GVI+ DA+ ++++ LPSK ELY +IA SIKAVPTK
Sbjct: 79 LRRSLPEGTTAAVVKNTLMERAVSGTDYETA-AELLKGPHMWFFIEDDIGASIKAYNGFIKENDLMESHGIIGGVIESTLYDADGVKQIGNLPSKLELYAKIAGSIKAVPTK 189 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2063.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2063.2.2 >prot_P-wetherbeei_contig2063.2.2 ID=prot_P-wetherbeei_contig2063.2.2|Name=mRNA_P-wetherbeei_contig2063.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=183bp MATAMDCNDDGGGCDGCNDGLAAGRRQVTELRKALPEGTTARVVKNKLMRback to top mRNA from alignment at P-wetherbeei_contig2063:3718..5665- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2063.2.2 ID=mRNA_P-wetherbeei_contig2063.2.2|Name=mRNA_P-wetherbeei_contig2063.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1948bp|location=Sequence derived from alignment at P-wetherbeei_contig2063:3718..5665- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2063:3718..5665- >mRNA_P-wetherbeei_contig2063.2.2 ID=mRNA_P-wetherbeei_contig2063.2.2|Name=mRNA_P-wetherbeei_contig2063.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig2063:3718..5665- (Phaeothamnion wetherbeei SAG_119_79)back to top |