prot_P-wetherbeei_contig20616.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20616.1.1
Unique Nameprot_P-wetherbeei_contig20616.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length142
Homology
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BLAST of mRNA_P-wetherbeei_contig20616.1.1 vs. uniprot
Match: A0A5A8EPJ8_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EPJ8_CAFRO)

HSP 1 Score: 81.3 bits (199), Expect = 3.860e-15
Identity = 61/141 (43.26%), Postives = 77/141 (54.61%), Query Frame = 0 
Query:    2 VVACCDVLLLLPDDLSVDWCRESADAGTAAETAESKALVGVAGLAIAAAASGSRATAAVQPVAGYLQKPTAAAAAAAGALLPHGCVAVDTGLVVFWPAAAAALAALSSNPALAGCTARGVSAGTPPLRLELYSDLLFALSG 142
            VVA  DVLLL+P+   VDW +E A   T       KAL    G+   AA  G  A +   PV  + QK T    AAAGA+ P G V +D+G++ F P A + L  L+    +  CT  GV   T PLR+ELYSDLL A+SG
Sbjct:  149 VVASSDVLLLIPESFRVDWPQEGA---TGLAIPSPKALGPNHGVYHVAALPGDGAASMHVPVERFFQKATVDELAAAGAVSPAGEVLLDSGVIYFSPPATSTLLELAQTAPVLSCTYLGVDTATRPLRVELYSDLLLAMSG 286
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BLAST of mRNA_P-wetherbeei_contig20616.1.1 vs. uniprot
Match: A0A0G4EMB4_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EMB4_VITBC)

HSP 1 Score: 77.4 bits (189), Expect = 8.650e-14
Identity = 42/80 (52.50%), Postives = 52/80 (65.00%), Query Frame = 0 
Query:   63 VAGYLQKPTAAAAAAAGALLPHGCVAVDTGLVVFWPAAAAALAALSSNPALAGCTARGVSAGTPPLRLELYSDLLFALSG 142
            VA +LQKPT A   + GA LP G +AVDTG+V F       L  ++ +P LAGCT  G+  G PPLR ELYSD++ ALSG
Sbjct:  187 VAQFLQKPTEAVMTSEGASLPPGKIAVDTGVVYFDTTTTQRLVEMAQSPVLAGCTEAGLKEGQPPLRTELYSDIMLALSG 266
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20616.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A5A8EPJ8_CAFRO3.860e-1543.26Uncharacterized protein n=5 Tax=Cafeteria roenberg... [more]
A0A0G4EMB4_VITBC8.650e-1452.50Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012887L-fucokinasePFAMPF07959Fucokinasecoord: 2..140
e-value: 8.4E-17
score: 61.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20616contigP-wetherbeei_contig20616:54..590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20616.1.1mRNA_P-wetherbeei_contig20616.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20616 54..590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20616.1.1 ID=prot_P-wetherbeei_contig20616.1.1|Name=mRNA_P-wetherbeei_contig20616.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=142bp
LVVACCDVLLLLPDDLSVDWCRESADAGTAAETAESKALVGVAGLAIAAA
ASGSRATAAVQPVAGYLQKPTAAAAAAAGALLPHGCVAVDTGLVVFWPAA
AAALAALSSNPALAGCTARGVSAGTPPLRLELYSDLLFALSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012887Fucokinase