mRNA_P-wetherbeei_contig2061.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: D8LEH7_ECTSI (Proteasome endopeptidase complex n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEH7_ECTSI) HSP 1 Score: 209 bits (533), Expect = 5.380e-63 Identity = 110/232 (47.41%), Postives = 146/232 (62.93%), Query Frame = 2
Query: 125 AARGVSMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVP 820
AA G+ TTLVAA+FDGGVV+GADSRTS G++VA+ +K+ V + L RSGS+ADTQFVA + +LE Y R P+VR AAT +NLCY ++D SA I+CAGWD R+G S++ +P GG+LLEQ +A+SGSG+ Y GYCD++ R G G R+EC+ VR A+E+A+ RD ASGGV+RLC+V +GVER +VP
Sbjct: 15 AAAGLVDATTLVAARFDGGVVIGADSRTSQGSFVANSGTDKITPVSPGVFLARSGSSADTQFVAGVIEAKLEAYRTEFGRYPTVRAAATATRNLCYANKDQLSAGIICAGWDSREGGSVFSVPQGGSLLEQPFAVSGSGAVYALGYCDDNL--RPGLG-------------------------------RDECVSHVRTALEMAVRRDGASGGVIRLCVVSADGVERWTVVP 213
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A2G5B312_COERN (Proteasome subunit beta n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B312_COERN) HSP 1 Score: 199 bits (505), Expect = 3.470e-59 Identity = 105/225 (46.67%), Postives = 144/225 (64.00%), Query Frame = 2
Query: 137 VSMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRV 811
V++GTT++A KFDGGVV+GADSRTS+G YVA+R +K+ +VH I CRSGSAADTQ VA+ V L+ Y D P+V AA+L + +CYQ+++ SA I+ GWD + GAS+Y +P GG+L ++EY++ GSGSAYI GYCD+ F R G +S+EEC+E V++AV LA+ RD +SGGV+R ++ NGVER V
Sbjct: 9 VNLGTTIMAVKFDGGVVIGADSRTSTGPYVANRVTDKLTKVHDQIYCCRSGSAADTQAVADIVKYYLDLYTAQHDEPPTVSVAASLFQEICYQNKNNLSAGIIVGGWDKQNGASVYNVPLGGSLHKEEYSIGGSGSAYIYGYCDKTF--RPG-------------------------------MSKEECLEFVKNAVSLAMTRDGSSGGVIRTAVITENGVERSV 200
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A1Y1WB45_9FUNG (Proteasome subunit beta n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WB45_9FUNG) HSP 1 Score: 196 bits (499), Expect = 2.760e-58 Identity = 104/230 (45.22%), Postives = 147/230 (63.91%), Query Frame = 2
Query: 137 VSMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVPRD 826
V++GTT++A +FDGGVV+GADSRT++GAY+A+R +K+ ++H I CRSGSAADTQ VA+ V ++ Y AP+V+ AA+L + +CYQ+++ SA I+ AGWD R GAS+Y IP GG+L + +A+ GSGS YI GYCD+ F LSR+ECIE V+++V LA+ RD +SGGVVRL ++ ++GVER+ VP D
Sbjct: 9 VNLGTTIMAVQFDGGVVVGADSRTTTGAYIANRVTDKLTKIHDRIYCCRSGSAADTQAVADIVQYHMQMYTAQHGEAPTVKVAASLFQEICYQNKNNLSAGIIVAGWDERDGASVYNIPLGGSLHREPFAIGGSGSTYIYGYCDKVF---------------------------------RPDLSRDECIEFVKNSVSLAMTRDGSSGGVVRLAVITKDGVERQ-FVPGD 204
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A7S4KMV0_9EUKA (Proteasome subunit beta n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KMV0_9EUKA) HSP 1 Score: 196 bits (498), Expect = 8.750e-58 Identity = 101/225 (44.89%), Postives = 142/225 (63.11%), Query Frame = 2
Query: 140 SMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVI 814
SMGT+++A +FDGGVV+ ADSRTS+G YV++R ++K+ VH I+ CRSGSAADTQ+VA+ V LE + L PSV+TAATL K LCY++++ +A I+ GWDP +G S+Y IP GGA + Q +A+ GSGS YI GYCD H+ + +S+EEC+ R+A+ LA+ARD +SGGV+R ++ +GVER +I
Sbjct: 39 SMGTSIMAVEFDGGVVVAADSRTSTGQYVSNRVSDKLTHVHDRILCCRSGSAADTQYVADVVKFYLELHCLELSERPSVKTAATLFKQLCYENKNYLTAGIIVGGWDPVEGGSVYSIPLGGACVRQPFAIGGSGSTYIYGYCDAHYKK---------------------------------GMSKEECLAFCRNALSLAMARDGSSGGVIRSAVITESGVEREMI 230
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A444USC0_ACIRT (Proteasome subunit beta n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444USC0_ACIRT) HSP 1 Score: 196 bits (497), Expect = 9.360e-58 Identity = 99/237 (41.77%), Postives = 144/237 (60.76%), Query Frame = 2
Query: 125 AARGVSMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVPRDWPS 835
A + VS GTT++A +FDGGVV+GADSRT++GAY+A+R +K+ Q+H I CRSGSAADTQ +A+ V +L + + D AP V+TAA L K +CY++R+ A I+ AGWD R+G +Y +P GG ++ Q +++ GSGS+YI G+ D + R +S+EEC++ +A+ LA+ RD +SGGVVRL + +GVERRVI+ P
Sbjct: 22 ARQEVSTGTTIMAVEFDGGVVMGADSRTTTGAYIANRVTDKLTQIHDQIFCCRSGSAADTQAIADAVTYQLGFHSIELDEAPLVQTAANLFKEMCYKYREELMAGIIVAGWDKRRGGQVYTVPMGGMMVRQPFSIGGSGSSYIYGFVDSSYKR---------------------------------GMSKEECLQFTANALSLAMERDGSSGGVVRLAAISESGVERRVILGNQLPK 225
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A1C7N0K9_9FUNG (Proteasome subunit beta n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N0K9_9FUNG) HSP 1 Score: 194 bits (494), Expect = 1.500e-57 Identity = 101/232 (43.53%), Postives = 146/232 (62.93%), Query Frame = 2
Query: 137 VSMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVPRDWP 832
V++GT+++A F GV+LGADSRT++GAY+A+R +K+ +VH +I CRSGSAADTQ VA+ V L+ Y + + APSVRTAA L + LCYQ++D SA ++ AGWD ++G +Y IP GG+L +Q +A+ GSGS YI GYCD ++ +SREEC+E V++++ LA++RD +SGGV+RL ++ R GVER I + P
Sbjct: 8 VNLGTSIMAVAFKDGVILGADSRTTTGAYIANRVTDKLTKVHDTIYCCRSGSAADTQAVADIVHYYLQMYTASENEAPSVRTAAALFQELCYQNKDNLSAGVIVAGWDKKEGPCVYNIPLGGSLHKQPFAIGGSGSTYIYGYCDAYY---------------------------------KDDMSREECLEFVKNSLALAMSRDGSSGGVIRLAVITREGVERLFIPGNELP 206
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: M2WR55_GALSU (Proteasome subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WR55_GALSU) HSP 1 Score: 195 bits (495), Expect = 1.760e-57 Identity = 98/230 (42.61%), Postives = 140/230 (60.87%), Query Frame = 2
Query: 143 MGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVPRDWP 832
+GTT++A +FDGGVVLGADSRT++GAY+A+R ++K+ + I CRSGSAADTQ +A+ V L ++L D P V+TAA++ + LCY ++D A I+CAGWDP G +Y IP GG ++ Q Y++ GSGS YI G+CD HF + +SRE+CI+ + AV LA+ARD +SGGV+RL ++++ GV R +I P
Sbjct: 26 LGTTIMAVEFDGGVVLGADSRTTTGAYIANRVSDKITPLSERIYCCRSGSAADTQAIADYVRYYLSIHQLDLDDLPCVKTAASICRELCYSNKDRLLAGIICAGWDPLYGGQVYTIPLGGTMIRQPYSIGGSGSTYIYGFCDAHFQK---------------------------------GMSREQCIDFTKKAVALAMARDGSSGGVIRLVVIEKQGVWREMIAGNQLP 222
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A6J0J7X7_9PASS (Proteasome subunit beta n=77 Tax=Neognathae TaxID=8825 RepID=A0A6J0J7X7_9PASS) HSP 1 Score: 194 bits (494), Expect = 2.980e-57 Identity = 105/238 (44.12%), Postives = 140/238 (58.82%), Query Frame = 2
Query: 119 DNAARGVSMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVPRDWP 832
D A VS GTT++A +FDGGVV+GADSRT++G+YVA+R +K+ VH I CRSGSAADTQ VA+ VA +L + + + P VRTAA L + CY++R+ SA I+ AGWDPR+G +Y++P GG LL Q +A+ GSGS+YI GY D F +SR +C E V A+ LA+ RD +SGGV+RL + GVER V+ D P
Sbjct: 21 DWTAEPVSTGTTIMAVEFDGGVVIGADSRTTTGSYVANRVTDKLTPVHDRIFCCRSGSAADTQAVADAVAYQLAFHSVELEEPPRVRTAARLFQQSCYRYREELSAGIIVAGWDPRRGGQVYVVPLGGLLLRQPFAVGGSGSSYIYGYLDATFQ---------------------------------PGMSRSQCQEFVARALALAMVRDGSSGGVIRLAAITEEGVERTVLAGPDLP 225
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A8H7UIW0_MORIS (Proteasome subunit beta n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UIW0_MORIS) HSP 1 Score: 192 bits (489), Expect = 8.460e-57 Identity = 99/230 (43.04%), Postives = 144/230 (62.61%), Query Frame = 2
Query: 137 VSMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVPRD 826
V++GT+++A F GV++GADSRT++G+Y+A+R +K+ +VH I CRSGSAADTQ VA+ V L+ Y + D PSV TAATL + +CYQ++D SA I+ AGWD +KG ++Y IP GG+L +Q +A+ GSGS YI GYCD + +SREEC++ V++++ LA+ARD +SGGV+R+ ++ GVER + VP D
Sbjct: 8 VNLGTSIMAVAFKDGVIVGADSRTTTGSYIANRVTDKLTKVHDLIYCCRSGSAADTQAVADIVQYYLQMYSVQQDEPPSVHTAATLFQEMCYQNKDQLSAGIIVAGWDKKKGGTVYNIPLGGSLHQQPFAIGGSGSTYIYGYCDSQY---------------------------------KDGMSREECVDFVKNSLALAMARDGSSGGVIRMAVITEKGVER-LFVPGD 203
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A0G4J808_PLABS (Proteasome subunit beta n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J808_PLABS) HSP 1 Score: 192 bits (488), Expect = 1.850e-56 Identity = 99/228 (43.42%), Postives = 141/228 (61.84%), Query Frame = 2
Query: 143 MGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVPRD 826
+GTT++A FDGGVV+GADSRTS+GAYVA+R ++K+ ++H I CRSGSAADTQ +A+ V L+ + + P V AA L + LCY ++D+ A ++ GWD R G S+Y + GG++++Q+Y++ GSGS+YI GYCD HF + +++EEC + VRHA+ AIARD +SGGV+RL +D NG ER V+VP D
Sbjct: 22 LGTTIMAVAFDGGVVVGADSRTSTGAYVANRVSDKLTKLHDRIYCCRSGSAADTQAIADIVKYYLDVHSIEIGDLPEVSVAAHLARRLCYDYKDSLLAGLIIGGWDKRNGGSVYTVTLGGSVVKQDYSIGGSGSSYIYGYCDAHFRK---------------------------------GMTKEECQKFVRHAISHAIARDGSSGGVIRLATIDANGAER-VMVPGD 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2061.1.4 >prot_P-wetherbeei_contig2061.1.4 ID=prot_P-wetherbeei_contig2061.1.4|Name=mRNA_P-wetherbeei_contig2061.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp MCGIISLLTAFIFLCAPALAHFWDAHDNAARGVSMGTTLVAAKFDGGVVLback to top mRNA from alignment at P-wetherbeei_contig2061:177..1630- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2061.1.4 ID=mRNA_P-wetherbeei_contig2061.1.4|Name=mRNA_P-wetherbeei_contig2061.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1454bp|location=Sequence derived from alignment at P-wetherbeei_contig2061:177..1630- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2061:177..1630- >mRNA_P-wetherbeei_contig2061.1.4 ID=mRNA_P-wetherbeei_contig2061.1.4|Name=mRNA_P-wetherbeei_contig2061.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig2061:177..1630- (Phaeothamnion wetherbeei SAG_119_79)back to top |