prot_P-wetherbeei_contig2039.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig2039.2.1
Unique Nameprot_P-wetherbeei_contig2039.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length228
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig2039.2.1 vs. uniprot
Match: A0A842PVC8_9ARCH (AAA family ATPase (Fragment) n=1 Tax=Nitrososphaera sp. TaxID=1971748 RepID=A0A842PVC8_9ARCH)

HSP 1 Score: 57.0 bits (136), Expect = 5.510e-6
Identity = 55/212 (25.94%), Postives = 89/212 (41.98%), Query Frame = 0 
Query:   23 LWCLLARPKTINDMHGNNDAAQLVDEWFSSHLKTASTSSVLFVEGPCGSGKSLAVNLAAQSHGFRTIMAFASESRSMARFDAHVRQATAFQNFGVVV-------LDEFESFA--EDHAGLDNVTRFINTFSARPASSPRVLLVCISNEASDAFSRIIDRSTFVQFDPLSISDTHGVLKHAHRECPTTVAPMDLYLFASQVTGDARQAINQFQ 225
            +W    RPKT+ +M GN DA  +V +W +  +   S S  L + GP G+GK+  V+  A+   +  +   AS+ R+     A +     FQN   ++       LDE +  +  ED  GLD +T  I          P V ++  +N+ S    ++      V+F+P+        L H  +     +A  D         GD R  +N  Q
Sbjct:    2 MWSEKHRPKTVQEMVGNEDARLVVIKWLTGWV---SGSRPLLLLGPPGTGKTTLVHTLARQLDYDVVEMNASDIRNKDALQARI--TPVFQNTANLIGKKIMLFLDEVDGISGREDTGGLDTLTNLIK--------EPTVPVIMAANKKSLKIMKLAKACKIVEFNPVPPRLLLLFLDHVLQSEGVKLASGDKTSIIDNSRGDIRSLLNSAQ 200
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2039.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A842PVC8_9ARCH5.510e-625.94AAA family ATPase (Fragment) n=1 Tax=Nitrososphaer... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 59..181
e-value: 0.0091
score: 25.2
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 65..173
e-value: 1.6E-6
score: 28.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 21..179
e-value: 2.1E-14
score: 55.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 22..227
IPR004582Checkpoint protein Rad17/Rad24PANTHERPTHR12172CELL CYCLE CHECKPOINT PROTEIN RAD17coord: 17..226
NoneNo IPR availableCDDcd00009AAAcoord: 48..175
e-value: 2.60894E-6
score: 44.0591

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2039contigP-wetherbeei_contig2039:2073..2756 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2039.2.1mRNA_P-wetherbeei_contig2039.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig2039 2073..2762 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig2039.2.1 ID=prot_P-wetherbeei_contig2039.2.1|Name=mRNA_P-wetherbeei_contig2039.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=228bp
MVSWGDSIVLSSPVDDTLDTNSLWCLLARPKTINDMHGNNDAAQLVDEWF
SSHLKTASTSSVLFVEGPCGSGKSLAVNLAAQSHGFRTIMAFASESRSMA
RFDAHVRQATAFQNFGVVVLDEFESFAEDHAGLDNVTRFINTFSARPASS
PRVLLVCISNEASDAFSRIIDRSTFVQFDPLSISDTHGVLKHAHRECPTT
VAPMDLYLFASQVTGDARQAINQFQIAF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase
IPR004582Checkpoint_prot_Rad17_Rad24