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Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001680 | WD40 repeat | SMART | SM00320 | WD40_4 | coord: 116..160
e-value: 1.2
score: 16.5
coord: 694..739
e-value: 6.3
score: 12.0
coord: 240..287
e-value: 170.0
score: 2.9 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 141..160
score: 8.603614 |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | GENE3D | 2.130.10.10 | | coord: 418..755
e-value: 4.7E-6
score: 27.4 |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | GENE3D | 2.130.10.10 | | coord: 49..294
e-value: 4.8E-11
score: 44.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 866..881 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 13..28 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 891..909 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 307..403 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1045..1073 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 746..807 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 823..909 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 826..842 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 389..403 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 13..43 |
| IPR036322 | WD40-repeat-containing domain superfamily | SUPERFAMILY | 50978 | WD40 repeat-like | coord: 87..737 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-wetherbeei_contig2034.2.1 ID=prot_P-wetherbeei_contig2034.2.1|Name=mRNA_P-wetherbeei_contig2034.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1073bp
MLTGFKRQASGGAGLANGNTSSGNGSGGDVGGSGGGGGSSSGTTANSVDT
IGAHFLSFWDLPTSDERQRAAQFLPVLKQRRSVDCAQTTLHWCGSMDTLF
SAGGSGGSVLGWSLNPLQQKLKIYLHTSAVTCLADLGAVADPSRHFLITG
SMDGTIGIWEGGSSGNGGGFNASGAGNGVSTARGGSAAREIAGSAATADS
SNSQINANGDSGAGGAGASVPPIGGPATAAGAAAAAAGGAGKQVQALHAH
ERGVCCLAVARAHGLVLTAGVLPGAAADSSADVLVWGRAQPAKRSAASFR
GLDSGGGRSGICPGTQHGTGGSGWPGAAGNGQPSSGPGGGGRPGTGGRRS
GTGDKRPGTGGGRPGTGEKRPGMGGRRPGTGASACANGRGSGHGSQGSGD
AASQWNGWEYGDYGVDDDVLDEKLRGRLSGHQFQVVAIQLVFPAALAGPA
AVESPAGAGGTAGAAAAGARMVAAAGNAAAAAAAAGAIAATAAIPSTVVT
ADRGGTFFVWSLQSFARLHVFSRAALSPSATRPIRPAVTAAAAAAGGATA
SITLAAATASAIAAASAAVTVAVVGAAFLPGTAARPPLLAAAAGDAVEYF
SECHPRVHEPLVGAFFNAKLHTFIVASGQRITTWDAHNGSIVRTIAAAAV
LGADAQITAVCQDGRGARLVVGGTGVPAGSSAAAHSVVCCAPATGTVMKH
LDPCGRAGSGGVNWVGAAGDGGDRLICTAGADGILRVLDEADPVGYRPAA
GGEDSESNGGSSSGGGGGGRDGFRRKCWHGKRSASSAPRARSSGCGAGRG
GGSGRSLRGRSVLLRQVCLMAGSSPSDRGSGGSESTGGGGCSHQSYDFPE
GGDGAGGGSGGGSGGAGGASSGSSIDGSASPPRSRGSLPAAPSLGPSSTG
HDGMSTGLLPQNAATAAAGAFSGGAAAKRRMRFGSVVLRATAAVTAMPGT
VGGGAAAAAAAWGRNSDQVDMLAAAADQHLNLMTSAVRVDFRGGAGGCES
LVSLWDYELCTFLGACASPTLAPVAAAEATAAAATAMEAANAAAAAVAAM
VPPPPPQRGSLSPSPTRGAGQRR back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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