prot_P-wetherbeei_contig2004.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig2004.2.1
Unique Nameprot_P-wetherbeei_contig2004.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length354
Homology
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BLAST of mRNA_P-wetherbeei_contig2004.2.1 vs. uniprot
Match: D7G904_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G904_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 3.680e-15
Identity = 63/156 (40.38%), Postives = 77/156 (49.36%), Query Frame = 0 
Query:   43 GGLRRASSRPISIIRSTSVPGQLHEATG---------------------TTQYGKFQDFNDDLSVVTSAAAAAAVAMGFSGARAVATPVLVAQSLPMPAAPLMGSSLPPSRFMDDMPLLHLGPQADAAEVPTICGSLSASLNTVGVMYASSCPATL 177
            G +RR +SRPISIIRSTSVP QL + T                      T       DFN               A G +G         + QSLP P APL+  SLPPSRF+DD+P L LGPQAD +   + CG+LS SL     +YA+SCPA +
Sbjct:   23 GVVRRTASRPISIIRSTSVPAQLQDRTQAGDPDPEGGSGGNPANRRGLHTRDRSLQHDFNSG------------AAGGVNG---------IVQSLPPPQAPLLAGSLPPSRFLDDLPPLSLGPQADNS-FDSDCGALSTSLKA-NRLYATSCPANI 155
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2004.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G904_ECTSI3.680e-1540.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..353
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..353

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2004contigP-wetherbeei_contig2004:1727..3023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2004.2.1mRNA_P-wetherbeei_contig2004.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig2004 1416..3914 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig2004.2.1 ID=prot_P-wetherbeei_contig2004.2.1|Name=mRNA_P-wetherbeei_contig2004.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=354bp
MANARWGNPRVSRSPLAPGPASDQKQQQQQRTSQSPPVAIVAGGLRRASS
RPISIIRSTSVPGQLHEATGTTQYGKFQDFNDDLSVVTSAAAAAAVAMGF
SGARAVATPVLVAQSLPMPAAPLMGSSLPPSRFMDDMPLLHLGPQADAAE
VPTICGSLSASLNTVGVMYASSCPATLWGFQRAAAIHHHGGGAGAGKPPS
LAEEDEDEERPESFSPGSNRGAGSLTGLSVLEAIASSSSGPAMFLPPRDG
RDFSEDSSAGDMGRMIGGYGGGEGGGRHTIGDRDAAGVGVNAGPDGEDGD
GIDALNPPGGVFMLEELDVGGSMEGEADDAATAAADDEDEDDDDRGEEDG
GGD*
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