mRNA_P-wetherbeei_contig19801.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19801.1.1 vs. uniprot
Match: D7FJM6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJM6_ECTSI) HSP 1 Score: 139 bits (351), Expect = 6.620e-36 Identity = 65/121 (53.72%), Postives = 90/121 (74.38%), Query Frame = 1
Query: 16 RYIVTDVAQGTLDFVATHPALQRFVKMGVLDVALLDGESPET-GPLWLQISKRHVDLATVTSPVVAICNYVFDTLVQDAFRIKGGQLYENRVSMTSERLPPADVRQLHLKSMEGLSVSWNH 375
RY+VTDVAQGTLD+V HP++Q F+K GVL+VALLD E P L LQ+S + VDL + +PV +CNYVFD+L+QDAFR+KG LYENRV++T+ + P ++ +L L +++GL + W H
Sbjct: 266 RYVVTDVAQGTLDYVRRHPSMQGFLKKGVLEVALLDAEDPSPPSTLLLQVSGQVVDLKSAKNPVATVCNYVFDSLLQDAFRLKGKTLYENRVTITATKPLPENLAELSLTALQGLGLQWEH 386
BLAST of mRNA_P-wetherbeei_contig19801.1.1 vs. uniprot
Match: A0A2T4VAL4_VITXG (Uncharacterized protein n=1 Tax=Vitiosangium sp. (strain GDMCC 1.1324) TaxID=2138576 RepID=A0A2T4VAL4_VITXG) HSP 1 Score: 77.4 bits (189), Expect = 4.360e-14 Identity = 41/90 (45.56%), Postives = 59/90 (65.56%), Query Frame = 1
Query: 10 FCRYIVTDVAQGTLDFVATHPALQRFVKMGVLDVALLDGESPETGPLWLQISKRHVDLATVTSPVVAICNYVFDTLVQDAFRIKGGQLYE 279
FC YI++D + L F +H +LQ FV+ GVLD AL D E + G + L+ + R ++ A + P+VAI NYVFD++ DAF +K GQL+E
Sbjct: 139 FC-YILSDFTESNLQFWQSHRSLQPFVEQGVLDFALFDAE--KDGEVRLRRAGRTLEPARLARPLVAIANYVFDSIPHDAFAVKDGQLHE 225
BLAST of mRNA_P-wetherbeei_contig19801.1.1 vs. uniprot
Match: A0A1V9ZZE4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZE4_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.610e-13 Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 16 RYIVTDVAQGTLDFVATHPALQRFVKMGVLDVALLDGESPETGPLWLQISKRHVDLATVTSPVVAICNYVFDTLVQDAFRIKGGQLYENRVSMTSERLPPADV 324
RYI+TD L F THPALQ FVK G+LD A+ D ++ L+L SK + + +P+ + NY+FDTL + FR++ G L + +S+ S R D
Sbjct: 143 RYIMTDFTDTNLKFWTTHPALQSFVKDGLLDFAIFDATRDDS--LYLINSKTTLSPGILKNPIAIVANYLFDTLHHELFRMENGLLKQGLISVGSSRSQEPDA 243
BLAST of mRNA_P-wetherbeei_contig19801.1.1 vs. uniprot
Match: A0A7G5C0E2_9BACL (Uncharacterized protein n=1 Tax=Cohnella cholangitidis TaxID=2598458 RepID=A0A7G5C0E2_9BACL) HSP 1 Score: 74.7 bits (182), Expect = 3.540e-13 Identity = 38/96 (39.58%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 16 RYIVTDVAQGTLDFVATHPALQRFVKMGVLDVALLDGESPETGPLWLQISKRHVDLATVTSPVVAICNYVFDTLVQDAFRIKGGQLYENRVSMTSE 303
RY++TD A+ L+F HP+ +RF + G+ D+AL D + ++ + L+ S + +++SPVVAI NYVFD+L QD + I GQ+ VS+ +E
Sbjct: 19 RYVLTDFARSNLEFWRQHPSFERFRERGIWDIALFDAQ--QSDEIALEYSGVSLRPGSLSSPVVAIANYVFDSLPQDLYYIDQGQISHCLVSLYAE 112
BLAST of mRNA_P-wetherbeei_contig19801.1.1 vs. uniprot
Match: B9Q5A1_TOXGV (TPR domain-containing protein n=15 Tax=Toxoplasma gondii TaxID=5811 RepID=B9Q5A1_TOXGV) HSP 1 Score: 74.7 bits (182), Expect = 4.090e-13 Identity = 41/118 (34.75%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 19 YIVTDVAQGTLDFVATHPALQRFVKMGVLDVALLDGESPETGPLWLQISKRHVDLATVTSPVVAICNYVFDTLVQDAFRIKGGQLYENRVSMTSERLPPADVRQLHLKSMEGLSVSWN 372
Y+ +DVA+ + F + HPA Q F++ G LD A+ DG E + L SKR V + T P+VA+ NYVFD+L+ D +R+ G+ E + S P + M +S+ W+
Sbjct: 184 YVFSDVAEANVAFCSKHPAFQEFIQQGWLDFAVFDGNDKEAR-IHLTCSKRTVPIGT---PIVAVANYVFDSLLTDGWRVTPGKEVEFHRAAVSVYSPQVEPDPTAADIMLRMSLGWD 297
BLAST of mRNA_P-wetherbeei_contig19801.1.1 vs. uniprot
Match: A0A7W1YV74_9BACT (Uncharacterized protein n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1YV74_9BACT) HSP 1 Score: 74.3 bits (181), Expect = 5.090e-13 Identity = 37/111 (33.33%), Postives = 63/111 (56.76%), Query Frame = 1
Query: 19 YIVTDVAQGTLDFVATHPALQRFVKMGVLDVALLDGESPETGPLWLQISKRHVDLATVTSPVVAICNYVFDTLVQDAFRIKGGQLYENRVSMTSE---RLPPADVRQLHLK 342
Y++TD+A ++F +P L+ + + G+LD A +T P+ L K + T+ +P+V ICNY FDT+ Q+ FR + GQL E +S+ ++ + PA + QL +
Sbjct: 111 YVMTDIASSNIEFWQQNPQLKPYFEQGLLDCAYF--HHAQTDPIHLINRKETLSQETLVNPMVLICNYFFDTIPQELFRFRNGQLEEGEISLYTKVEGAIDPAIINQLQCR 219
BLAST of mRNA_P-wetherbeei_contig19801.1.1 vs. uniprot
Match: A0A2A9MH19_9APIC (Tetratricopeptide repeat-containing protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9MH19_9APIC) HSP 1 Score: 73.6 bits (179), Expect = 1.030e-12 Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 1
Query: 19 YIVTDVAQGTLDFVATHPALQRFVKMGVLDVALLDGESPETGPLWLQISKRHVDLATVTSPVVAICNYVFDTLVQDAFRIKGGQLYENRVSMTSERLPPADVRQLHLKSMEGLSVSWN 372
Y+ +DVA+ DF A HPA Q V+ G LD A+ DG + L L SK V + T P+VA+ NYVFD+L+ D +R+ G+ E + S P + + M +S+ W+
Sbjct: 160 YVFSDVAEANADFCAKHPAFQTLVREGWLDFAVFDGND-QNASLQLICSKEIVPVGT---PIVAVANYVFDSLLTDGWRVSPGKDVEFHRAAVSVYSPQVEPDPTAAEIMVRMSLGWS 273
BLAST of mRNA_P-wetherbeei_contig19801.1.1 vs. uniprot
Match: A0A2R5GQD6_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQD6_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.610e-12 Identity = 36/105 (34.29%), Postives = 62/105 (59.05%), Query Frame = 1
Query: 19 YIVTDVAQGTLDFVATHPALQRFVKMGVLDVALLDGESPE-TGPLWLQISKRHVDLATVTSPVVAICNYVFDTLVQDAFRIKGGQLYENRVSMTSERLPPADVRQ 330
Y++T+V + ++ F +H ALQ GVLD+A++D + P+ L++S + +PV+ +CNY+FD+L QDAF+++ G LY +V + P VR+
Sbjct: 434 YVLTEVHEVSVRFWKSHSALQALFDEGVLDLAVVDAAHVDGCDPIVLEMSGLTITAGQTEAPVIGVCNYLFDSLEQDAFQVRRGVLYRAQVEIVGGLGKPLHVRR 538
BLAST of mRNA_P-wetherbeei_contig19801.1.1 vs. uniprot
Match: F0VJQ5_NEOCL (Putative TPR domain-containing protein n=1 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=F0VJQ5_NEOCL) HSP 1 Score: 72.4 bits (176), Expect = 2.630e-12 Identity = 41/118 (34.75%), Postives = 62/118 (52.54%), Query Frame = 1
Query: 19 YIVTDVAQGTLDFVATHPALQRFVKMGVLDVALLDGESPETGPLWLQISKRHVDLATVTSPVVAICNYVFDTLVQDAFRIKGGQLYENRVSMTSERLPPADVRQLHLKSMEGLSVSWN 372
Y+ +DVA+ + F + HPA Q F+ G LD A+ DG E + L SK+ V L T P+VA+ NYVFD+L+ D +R+ G+ E + S P + M +S+ W+
Sbjct: 175 YVFSDVAEANVTFCSKHPAFQSFIADGWLDFAVFDGNDKEAR-IHLTCSKQTVPLGT---PIVAVANYVFDSLLTDGWRVTPGENVEFHRAAVSVYSPQVEPDPTAADIMLRMSLGWD 288
BLAST of mRNA_P-wetherbeei_contig19801.1.1 vs. uniprot
Match: UPI0011B23BDA (tetratricopeptide repeat protein n=1 Tax=Haliangium sp. UPWRP_2 TaxID=1931276 RepID=UPI0011B23BDA) HSP 1 Score: 71.2 bits (173), Expect = 6.320e-12 Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 16 RYIVTDVAQGTLDFVATHPALQRFVKMGVLDVALLDGESPETGPLWLQISKRHVDLATVTSPVVAICNYVFDTLVQDAFRIKGGQLYENRVSMT--SERLPPAD 321
RY++TD+A+ L + PAL + + GVLD AL D E+ E + L+ S + + V +P++ NY+ D+L+QDAFRI+ G L E V++ SE P +D
Sbjct: 156 RYVMTDIAESNLTAWVSSPALGPYFEEGVLDCALFDAENHEE--IVLRRSGVRLSVGQVKNPLIVFANYILDSLIQDAFRIREGVLEEALVTLRHPSENPPLSD 257 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19801.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19801.1.1 >prot_P-wetherbeei_contig19801.1.1 ID=prot_P-wetherbeei_contig19801.1.1|Name=mRNA_P-wetherbeei_contig19801.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp MDLFCRYIVTDVAQGTLDFVATHPALQRFVKMGVLDVALLDGESPETGPLback to top mRNA from alignment at P-wetherbeei_contig19801:278..1229+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19801.1.1 ID=mRNA_P-wetherbeei_contig19801.1.1|Name=mRNA_P-wetherbeei_contig19801.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=952bp|location=Sequence derived from alignment at P-wetherbeei_contig19801:278..1229+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19801:278..1229+ >mRNA_P-wetherbeei_contig19801.1.1 ID=mRNA_P-wetherbeei_contig19801.1.1|Name=mRNA_P-wetherbeei_contig19801.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig19801:278..1229+ (Phaeothamnion wetherbeei SAG_119_79)back to top |