mRNA_P-wetherbeei_contig1072.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1072.2.1 vs. uniprot
Match: A0A7S2PCQ3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCQ3_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.390e-24 Identity = 65/109 (59.63%), Postives = 78/109 (71.56%), Query Frame = 3 Query: 594 PAPQQSGGGGGMLAGMAGTIAQGFAFGTGSAVAHRAVGAVANSFGGS--DAA-PVQ-EQQXXXXXXXXXANACDVDQQNFYNCLQRNNGDVSSCNFLYESLQSCQRNST 908 PAP Q GGGM++G+A T+AQG AFGTGSA+AHRAVGAVA SFGGS DA P Q QQ A+AC D+Q FY CLQ N GD SSC FLY++L++CQR++T Sbjct: 26 PAPAQQSSGGGMMSGLASTVAQGMAFGTGSAIAHRAVGAVAGSFGGSGGDAEIPAQTSQQMGYEQQPTLASACADDKQMFYECLQMNKGDQSSCQFLYDALKTCQRSNT 134
BLAST of mRNA_P-wetherbeei_contig1072.2.1 vs. uniprot
Match: D7FPJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ0_ECTSI) HSP 1 Score: 105 bits (261), Expect = 4.070e-23 Identity = 58/103 (56.31%), Postives = 74/103 (71.84%), Query Frame = 3 Query: 615 GGGGMLAGMAGTIAQGFAFGTGSAVAHRAVGAVANSFGGSDAAPVQE--QQXXXXXXXXXANACDVDQQNFYNCLQRNNGDVSSCNFLYESLQSCQRNSTHSY 917 GGGGMLAGMA T+AQGFAFGTGS++AHRAVGAV GG +APV++ +Q + CDVD+QNF CLQ NN DV++C F++E+LQ+CQ + SY Sbjct: 35 GGGGMLAGMASTMAQGFAFGTGSSIAHRAVGAVMG--GGGSSAPVEQAQEQAPQAYQQPPVDPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKKSY 135
BLAST of mRNA_P-wetherbeei_contig1072.2.1 vs. uniprot
Match: A0A6U3Y7Z6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3Y7Z6_9STRA) HSP 1 Score: 105 bits (263), Expect = 4.850e-23 Identity = 72/146 (49.32%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 531 RSAPPAPRQAQPPAPQPA-------------AHPPAPQQSGGGGGMLAGMAGTIAQGFAFGTGSAVAHRAVGAVANSFGGS-DAAPVQEQQXXXXXXXXX------ANACDVDQQNFYNCLQRNNGDVSSCNFLYESLQSCQRNST 908 ++APPA + +P AP PA A PPAPQQSGG ML+G+ TIAQG AFGTGSA+AHRAVGAVA SF GS + AP ++QQ AC D++ F++CL+ N GD +C+FLY+ LQSCQRN T Sbjct: 20 KAAPPAAPRRKPAAPAPARXXXXXQTPAPMXAQPPAPQQSGG---MLSGIGSTIAQGMAFGTGSAIAHRAVGAVAESFSGSGEGAPAEQQQQPEQQYAAAPQQSQLTGACANDKEMFFDCLKVNQGDQQACSFLYDQLQSCQRNET 162
BLAST of mRNA_P-wetherbeei_contig1072.2.1 vs. uniprot
Match: A0A7R9VMR5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VMR5_9STRA) HSP 1 Score: 104 bits (260), Expect = 9.250e-23 Identity = 68/121 (56.20%), Postives = 79/121 (65.29%), Query Frame = 3 Query: 588 HPPAPQQSGGGGGMLAGMAGTIAQGFAFGTGSAVAHRAVGAVANSFGG----------SDAAPV----QEQQXXXXXXXXXANACDVDQQNFYNCLQRNNGDVSSCNFLYESLQSCQRNST 908 HPPA QQSGGGG M++G+ TIAQG AFGTGSA+AHRAVGAVA SFGG + AAP Q+QQ A CD D+Q F+ CLQ N GD SC FLY++LQ+CQRN T Sbjct: 37 HPPA-QQSGGGG-MMSGIGSTIAQGMAFGTGSAIAHRAVGAVAGSFGGGGEEAPQDSVAGAAPADAYGQQQQMQQM-----AGPCDQDKQMFFECLQMNKGDQESCRFLYDTLQTCQRNQT 150
BLAST of mRNA_P-wetherbeei_contig1072.2.1 vs. uniprot
Match: A0A7S1XNA6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNA6_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.890e-22 Identity = 61/108 (56.48%), Postives = 73/108 (67.59%), Query Frame = 3 Query: 600 PQQSGGGGGMLAGMAGTIAQGFAFGTGSAVAHRAVGAVANSFGGSD----AAPVQEQ---QXXXXXXXXXANACDVDQQNFYNCLQRNNGDVSSCNFLYESLQSCQRN 902 PQQ GG M++G+ GT+AQGFAFGTGSAVAHRAVGAVANSF GS AA +++Q Q NAC VDQQNF CL NNG+ +C F ++SLQ CQ+N Sbjct: 52 PQQQSGG--MMSGLLGTVAQGFAFGTGSAVAHRAVGAVANSFSGSGEQAPAAGMEQQPQFQQQAPIQQVSQNACSVDQQNFMQCLTENNGNAQACQFFFDSLQQCQQN 157
BLAST of mRNA_P-wetherbeei_contig1072.2.1 vs. uniprot
Match: A0A4D9CYI4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYI4_9STRA) HSP 1 Score: 102 bits (255), Expect = 4.020e-22 Identity = 62/112 (55.36%), Postives = 69/112 (61.61%), Query Frame = 3 Query: 591 PPAPQQSGGGGGMLAGMAGTIAQGFAFGTGSAVAHRAVGAVANSFGGSDAAPVQE---------QQXXXXXXXXXANACDVDQQNFYNCLQRNNGDVSSCNFLYESLQSCQR 899 PPAP Q GGGM++G A TIAQGFAFGTGSAVAHRAVGA A +F G AP Q+ QQ C +D QNF CLQ N G+V +C FLYESLQ CQR Sbjct: 34 PPAPHQPQQGGGMMSGFASTIAQGFAFGTGSAVAHRAVGAAAGAFSGDSEAPHQQEAYAQQPAHQQQYAAPAQGGQGPCALDGQNFQACLQANPGNVDACTFLYESLQQCQR 145
BLAST of mRNA_P-wetherbeei_contig1072.2.1 vs. uniprot
Match: A0A7S1D0K0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0K0_CYCTE) HSP 1 Score: 102 bits (255), Expect = 9.230e-22 Identity = 75/132 (56.82%), Postives = 85/132 (64.39%), Query Frame = 3 Query: 531 RSAPPAPRQAQPPAPQPAAHPPAPQQSGGGGGMLAGMAGTIAQGFAFGTGSAVAHRAVGAVANSFGGSDAAPVQEQQXXXXXXXXXAN------ACDVDQQNFYNCLQRNNGDVSSCNFLYESLQSCQRNST 908 R A P P PAP PAA PPAP Q GGGML+G+ TIAQG AFGTGSA+AHRAVGA A +FG XXXXXXXXX AC D+Q F+ CLQ N GD +C+FLYE+LQ+CQRN T Sbjct: 45 RRAAPRPASRSVPAPSPAARPPAPMQQQSGGGMLSGIGSTIAQGMAFGTGSAIAHRAVGAAAGAFGXXXXXXXXXXXXXXXXXXXXXQVQPLQGACAQDKQMFFECLQVNKGDQQACSFLYENLQACQRNDT 176
BLAST of mRNA_P-wetherbeei_contig1072.2.1 vs. uniprot
Match: A0A1Z5K887_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K887_FISSO) HSP 1 Score: 100 bits (250), Expect = 1.600e-21 Identity = 58/110 (52.73%), Postives = 70/110 (63.64%), Query Frame = 3 Query: 600 PQQSGGGGGMLAGMAGTIAQGFAFGTGSAVAHRAVGAVANSFGGSD-------AAPVQEQQXXXXXXXXXANACDVDQQNFYNCLQRNNGDVSSCNFLYESLQSCQRNST 908 P Q GGGML+G+ TIAQG AFGTGSA+AHRAVGAVA SFGG P+Q+QQ C +D+Q F++CLQ+N GD SC FLY+ LQ CQ+N T Sbjct: 40 PMQPSSGGGMLSGIGSTIAQGMAFGTGSAIAHRAVGAVAGSFGGGSNEVAAAVEQPMQQQQ---------GGVCAMDKQMFFDCLQQNKGDQESCRFLYDQLQQCQQNQT 140
BLAST of mRNA_P-wetherbeei_contig1072.2.1 vs. uniprot
Match: A0A7S1UZU7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZU7_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 5.540e-21 Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = 3 Query: 567 PAPQPAAHPPAPQQSGGGGGMLAGMAGTIAQGFAFGTGSAVAHRAVGAVANSFGGS----DAAPVQE---QQXXXXXXXXXANACDVDQQNFYNCLQRNNGDVSSCNFLYESLQSCQRNST 908 PA +P A PPA Q GGG+L+G+ TIAQG AFGTGSA+AHRAVGAVA G +AAPV++ + AC D+Q F+ CLQ N GD SC+FLY+ LQ+CQRN T Sbjct: 6 PAQKPKAAPPAVPQQSSGGGLLSGIGSTIAQGMAFGTGSAIAHRAVGAVAGGLSGGGEGGEAAPVEQYGDSLNPGSPTQQLSGACAGDKQMFFECLQVNKGDQQSCSFLYDQLQTCQRNET 126
BLAST of mRNA_P-wetherbeei_contig1072.2.1 vs. uniprot
Match: B7FUY2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUY2_PHATC) HSP 1 Score: 99.8 bits (247), Expect = 7.280e-21 Identity = 62/107 (57.94%), Postives = 69/107 (64.49%), Query Frame = 3 Query: 594 PAPQQSGGGGGMLAGMAGTIAQGFAFGTGSAVAHRAVGAVANSFGGSDAAPVQEQQXXXXXXXXXAN------ACDVDQQNFYNCLQRNNGDVSSCNFLYESLQSCQ 896 PAPQ SGGGG ML+G+ TIAQG AFGTGSA+AHRAVGAVA SFGG +AA E AN AC D+ FY CLQ N GD +C+FLYE LQ CQ Sbjct: 51 PAPQSSGGGG-MLSGIGSTIAQGMAFGTGSAIAHRAVGAVAGSFGGGEAA-APEPNMAAGVDAAPANPSAIQGACAQDKTMFYECLQHNQGDQQACHFLYEQLQQCQ 155 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1072.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1072.2.1 >prot_P-wetherbeei_contig1072.2.1 ID=prot_P-wetherbeei_contig1072.2.1|Name=mRNA_P-wetherbeei_contig1072.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp MLAGMAGTIAQGFAFGTGSAVAHRAVGAVANSFGGSDAAPVQEQQAAAAPback to top mRNA from alignment at P-wetherbeei_contig1072:4821..6624- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1072.2.1 ID=mRNA_P-wetherbeei_contig1072.2.1|Name=mRNA_P-wetherbeei_contig1072.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1804bp|location=Sequence derived from alignment at P-wetherbeei_contig1072:4821..6624- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1072:4821..6624- >mRNA_P-wetherbeei_contig1072.2.1 ID=mRNA_P-wetherbeei_contig1072.2.1|Name=mRNA_P-wetherbeei_contig1072.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig1072:4821..6624- (Phaeothamnion wetherbeei SAG_119_79)back to top |