mRNA_P-wetherbeei_contig19587.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19587.1.1 vs. uniprot
Match: A0A7X6XL69_9BACT (DUF2264 domain-containing protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7X6XL69_9BACT) HSP 1 Score: 236 bits (603), Expect = 1.710e-72 Identity = 120/191 (62.83%), Postives = 141/191 (73.82%), Query Frame = 1
Query: 1 SNNWVAMRALSHSLVAQKTGRPEDRERAGNLWSRVLSWQSESGLFVDSPGGLACPPTYHAKFCAMLALAQEFTDQDESGQMRQALLRGLDSLAGLVSPGGVLIPYGRSRHTLFGYAAAILALNWGAR-HADIKYAAPAHRLLKRLSAFQQGDGHIPCLLGPGEDRKANWDVYINNPDYNSYAAALLLLTGN 570
SNNWVAMRAL++SL A TG D A LW +VLSWQ+ GLF+DSPGG A P TYHAKFCAMLALA T +D S M AL GLD+L LVSP G+L+PYGRSR+TLFGYAAA+LAL GA + +YAA + L RL+ FQ+ DGHIPC+L GE KA+WDVY+NNPDYN+YAAALLLL G+
Sbjct: 129 SNNWVAMRALNYSLRAHLTGSKSDTREADRLWEKVLSWQTADGLFIDSPGGEATPVTYHAKFCAMLALAWTETGRDSSA-MAHALRHGLDALYHLVSPSGMLVPYGRSRNTLFGYAAALLALRRGATLFQETRYAAASTLLEARLTRFQRPDGHIPCVLNDGEAEKADWDVYVNNPDYNAYAAALLLLAGD 318
BLAST of mRNA_P-wetherbeei_contig19587.1.1 vs. uniprot
Match: A0A7X7A5W3_9BACT (DUF2264 domain-containing protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7X7A5W3_9BACT) HSP 1 Score: 224 bits (571), Expect = 7.360e-68 Identity = 115/188 (61.17%), Postives = 140/188 (74.47%), Query Frame = 1
Query: 1 SNNWVAMRALSHSLVAQKTGRPEDRERAGNLWSRVLSWQSESGLFVDSPGGLACPPTYHAKFCAMLALAQEFTDQDESGQMRQALLRGLDSLAGLVSPGGVLIPYGRSRHTLFGYAAAILALNWGAR-HADIKYAAPAHRLLKRLSAFQQGDGHIPCLLGPGEDRKANWDVYINNPDYNSYAAALLLL 561
SNNWVAMRAL++SL A +TG D A LW +V+SWQ+ GLF+DSPGG A P TYHAKFCAMLALA T ++ S +M AL GLD+L LVSP G+L+PYGRSR+TLFGYAAAILAL GA + +YAA + L RL+ +Q+ DGHIPC+L GE K +WDVY+NNPDYN+YAAA+LLL
Sbjct: 109 SNNWVAMRALNYSLRA-RTGSKSDAREADRLWEKVISWQTADGLFIDSPGGHATPVTYHAKFCAMLALASMETGRNSS-EMVDALRHGLDALCHLVSPTGMLVPYGRSRNTLFGYAAAILALRRGAALFQERRYAAVSALLEARLARYQRPDGHIPCVLNDGEAEKRDWDVYVNNPDYNAYAAAMLLL 294
BLAST of mRNA_P-wetherbeei_contig19587.1.1 vs. uniprot
Match: A0A2H5ZV83_9BACT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5ZV83_9BACT) HSP 1 Score: 110 bits (275), Expect = 9.990e-25 Identity = 77/197 (39.09%), Postives = 103/197 (52.28%), Query Frame = 1
Query: 1 SNNWVAMRALSHSLVAQKTGRPEDRERAGNLWSR-VLSWQSESGLFVDSP--GGLA-CPP-TYHAKFCAMLALAQEFTDQDESGQMRQALLRGLDSLAGLVSPGGVLIPYGRSRHTLFGYAAAI------LALNWGARHADIKYAAPAHRLLKRLSAFQQGDGHIPCLLGPGEDRKANWDVYINNPDYNSYAAALLL 558
+NNW AMRA+ RP D E A R VL Q E+GL+ D P GGL C P TYHAKFCAMLA+ F + GQ AL RG+ +LA L +P G + +GRS ++L+GYAAA+ LAL A A R+ + L+ + DG P E + WD Y++ DY ++AA L++
Sbjct: 129 TNNWHAMRAVCLLQRGMACNRPTDVEAALRCLRRDVLPLQDEAGLWADYPPGGGLRRCTPLTYHAKFCAMLAM---FVRDLQDGQAADALRRGVVALADLCAPDGETLYFGRSCNSLYGYAAALYATSVALALGVAQEEERAAVAWAADRIREFLARLVRPDGSFRTFPTPFERERLGWDDYVHRLDYAAFAALLMV 322
BLAST of mRNA_P-wetherbeei_contig19587.1.1 vs. uniprot
Match: A0A2H5ZR22_9BACT (Uncharacterized protein n=1 Tax=bacterium HR31 TaxID=2035426 RepID=A0A2H5ZR22_9BACT) HSP 1 Score: 107 bits (268), Expect = 8.770e-24 Identity = 75/200 (37.50%), Postives = 99/200 (49.50%), Query Frame = 1
Query: 1 SNNWVAMRALSHSLVAQKTGRPEDRERAGN-LWSRVLSWQSESGLFVDSP-----GGLACPPTYHAKFCAMLALAQEFTDQDESGQMRQALLRGLDSLAGLVSPGGVLIPYGRSRHTLFGYAAAILALNWGARHADI------KYAAPAHRLLKRLSAFQQGDGHIPCLLGPGEDRKANWDVYINNPDYNSYAAALLLLT 564
+NNW AMRA+ GR D E A + VL Q SGLF D P G P TYHAKFCAMLA+ F Q+++AL RG+ +L L +P G + +GRS ++L+GYAA + AL A + + AA A R+ L DG P E + WD Y+N DY ++AA LL+ T
Sbjct: 129 TNNWHAMRAVCLLQRGLALGRAADVEAARRCMQHEVLPLQGGSGLFADYPPRGSAGDRCTPLTYHAKFCAMLAM---FLSDLPDAQVQEALRRGVIALTYLCAPDGETLYFGRSCNSLYGYAATLYALRRSLEQAVVGGEQATRAAAAASRVAGFLGHLLWADGASRTYPTPFERERLGWDDYVNRLDYAAFAAYLLVQT 325 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19587.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19587.1.1 >prot_P-wetherbeei_contig19587.1.1 ID=prot_P-wetherbeei_contig19587.1.1|Name=mRNA_P-wetherbeei_contig19587.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=184bp MRALSHSLVAQKTGRPEDRERAGNLWSRVLSWQSESGLFVDSPGGLACPPback to top mRNA from alignment at P-wetherbeei_contig19587:665..1234+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19587.1.1 ID=mRNA_P-wetherbeei_contig19587.1.1|Name=mRNA_P-wetherbeei_contig19587.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=570bp|location=Sequence derived from alignment at P-wetherbeei_contig19587:665..1234+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19587:665..1234+ >mRNA_P-wetherbeei_contig19587.1.1 ID=mRNA_P-wetherbeei_contig19587.1.1|Name=mRNA_P-wetherbeei_contig19587.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=552bp|location=Sequence derived from alignment at P-wetherbeei_contig19587:665..1234+ (Phaeothamnion wetherbeei SAG_119_79)back to top |