mRNA_P-wetherbeei_contig19584.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19584.2.1 vs. uniprot
Match: A0A127EW03_9HYPH (Tricarboxylate transport protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EW03_9HYPH) HSP 1 Score: 64.3 bits (155), Expect = 5.940e-11 Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 1
Query: 1 AALLLSGLPSSAQDYPNRPITMIVPFPAGGGVDVIGRIVAEKL 129
A LLL G PS AQ++PNR +TM+VPF AGGG DV+GRIVA +L
Sbjct: 12 ALLLLPGAPSQAQNWPNRAVTMVVPFAAGGGTDVLGRIVARRL 54
BLAST of mRNA_P-wetherbeei_contig19584.2.1 vs. uniprot
Match: A0A127ESM3_9HYPH (Extra-cytoplasmic solute receptor family protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ESM3_9HYPH) HSP 1 Score: 63.9 bits (154), Expect = 8.260e-11 Identity = 34/50 (68.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 1 AALLLSGLPSSA-------QDYPNRPITMIVPFPAGGGVDVIGRIVAEKL 129
AA LL G S+A QDYP +PITMIVPFPAGGGVDV+GRIV EKL
Sbjct: 10 AATLLLGAFSNALAPNAWAQDYPTKPITMIVPFPAGGGVDVVGRIVGEKL 59
BLAST of mRNA_P-wetherbeei_contig19584.2.1 vs. uniprot
Match: X1JKP5_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1JKP5_9ZZZZ) HSP 1 Score: 59.3 bits (142), Expect = 8.610e-11 Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 1
Query: 1 AALLLSGLPSSAQDYPNRPITMIVPFPAGGGVDVIGRIVAEKL 129
AA L SGL + AQDYP+RP+ +IVPFPAGG D+I RIVA+KL
Sbjct: 14 AAALFSGL-ACAQDYPSRPVKIIVPFPAGGSNDIIARIVAQKL 55
BLAST of mRNA_P-wetherbeei_contig19584.2.1 vs. uniprot
Match: A0A4D7AW25_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Phreatobacter stygius TaxID=1940610 RepID=A0A4D7AW25_9HYPH) HSP 1 Score: 63.2 bits (152), Expect = 1.540e-10 Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 1
Query: 4 ALLLSGLPSSA--QDYPNRPITMIVPFPAGGGVDVIGRIVAEKL 129
A+LL GLP+SA QD+P RPI +IVPFPAGG D+IGR+VAEK+
Sbjct: 10 AVLLPGLPASAVAQDFPTRPIRLIVPFPAGGPADIIGRLVAEKM 53
BLAST of mRNA_P-wetherbeei_contig19584.2.1 vs. uniprot
Match: A0A261V1R6_9BORD (Tat pathway signal protein n=1 Tax=Bordetella genomosp. 4 TaxID=463044 RepID=A0A261V1R6_9BORD) HSP 1 Score: 63.2 bits (152), Expect = 1.580e-10 Identity = 28/43 (65.12%), Postives = 37/43 (86.05%), Query Frame = 1
Query: 1 AALLLSGLPSSAQDYPNRPITMIVPFPAGGGVDVIGRIVAEKL 129
A L+ LP++AQ+YP+RPIT+IVPF AGGGVDV+ R++AEKL
Sbjct: 16 AGLVSHALPAAAQEYPSRPITLIVPFSAGGGVDVMARLLAEKL 58
BLAST of mRNA_P-wetherbeei_contig19584.2.1 vs. uniprot
Match: A0A1Q7BW51_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BW51_9PROT) HSP 1 Score: 61.2 bits (147), Expect = 7.500e-10 Identity = 24/35 (68.57%), Postives = 32/35 (91.43%), Query Frame = 1
Query: 25 PSSAQDYPNRPITMIVPFPAGGGVDVIGRIVAEKL 129
P+ A+DYP+RP+T+I+PFPAGGGVD IGR++A KL
Sbjct: 20 PAVAEDYPSRPVTLIIPFPAGGGVDTIGRVIAAKL 54
BLAST of mRNA_P-wetherbeei_contig19584.2.1 vs. uniprot
Match: A0A4Q5TTT6_9BURK (Uncharacterized protein (Fragment) n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q5TTT6_9BURK) HSP 1 Score: 57.8 bits (138), Expect = 7.550e-10 Identity = 25/43 (58.14%), Postives = 35/43 (81.40%), Query Frame = 1
Query: 1 AALLLSGLPSSAQDYPNRPITMIVPFPAGGGVDVIGRIVAEKL 129
A+LLL+G + AQ +P +PI ++VPFPAGG D++GR+VAEKL
Sbjct: 14 ASLLLAGGAAHAQAWPAKPIRLVVPFPAGGSTDIVGRLVAEKL 56
BLAST of mRNA_P-wetherbeei_contig19584.2.1 vs. uniprot
Match: A0A840SUR8_9RHOB (Tripartite-type tricarboxylate transporter receptor subunit TctC n=1 Tax=Amaricoccus macauensis TaxID=57001 RepID=A0A840SUR8_9RHOB) HSP 1 Score: 61.2 bits (147), Expect = 7.590e-10 Identity = 24/43 (55.81%), Postives = 35/43 (81.40%), Query Frame = 1
Query: 1 AALLLSGLPSSAQDYPNRPITMIVPFPAGGGVDVIGRIVAEKL 129
AAL LP++AQDYP +P+T+++PF AGG DV+GRI+AE++
Sbjct: 12 AALAAVALPAAAQDYPTQPVTLVIPFAAGGSTDVVGRIIAERM 54
BLAST of mRNA_P-wetherbeei_contig19584.2.1 vs. uniprot
Match: A0A6L8VL18_9RHOB (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Frigidibacter albus TaxID=1465486 RepID=A0A6L8VL18_9RHOB) HSP 1 Score: 61.2 bits (147), Expect = 7.650e-10 Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 1 AALLLSGLP--SSAQDYPNRPITMIVPFPAGGGVDVIGRIVAEKL 129
AA+ L+ LP + AQDYPNRPITMIVPFPAGG D+ R+VA+K+
Sbjct: 8 AAMALTVLPFAAQAQDYPNRPITMIVPFPAGGATDIAARMVAQKM 52
BLAST of mRNA_P-wetherbeei_contig19584.2.1 vs. uniprot
Match: A0A127ENJ9_9HYPH (Extra-cytoplasmic solute receptor n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ENJ9_9HYPH) HSP 1 Score: 61.2 bits (147), Expect = 7.670e-10 Identity = 25/42 (59.52%), Postives = 33/42 (78.57%), Query Frame = 1
Query: 4 ALLLSGLPSSAQDYPNRPITMIVPFPAGGGVDVIGRIVAEKL 129
AL + +P++AQDYPNRPITMIVP+P GG D IGRI+ + +
Sbjct: 14 ALSFAAMPAAAQDYPNRPITMIVPYPPGGATDTIGRIIQDSM 55 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19584.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19584.2.1 >prot_P-wetherbeei_contig19584.2.1 ID=prot_P-wetherbeei_contig19584.2.1|Name=mRNA_P-wetherbeei_contig19584.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=43bp AALLLSGLPSSAQDYPNRPITMIVPFPAGGGVDVIGRIVAEKLback to top mRNA from alignment at P-wetherbeei_contig19584:1136..1264+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19584.2.1 ID=mRNA_P-wetherbeei_contig19584.2.1|Name=mRNA_P-wetherbeei_contig19584.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=129bp|location=Sequence derived from alignment at P-wetherbeei_contig19584:1136..1264+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19584:1136..1264+ >mRNA_P-wetherbeei_contig19584.2.1 ID=mRNA_P-wetherbeei_contig19584.2.1|Name=mRNA_P-wetherbeei_contig19584.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=129bp|location=Sequence derived from alignment at P-wetherbeei_contig19584:1136..1264+ (Phaeothamnion wetherbeei SAG_119_79)back to top |