mRNA_P-wetherbeei_contig19518.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19518.2.1
Unique NamemRNA_P-wetherbeei_contig19518.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19518.2.1 vs. uniprot
Match: A0A835ZDM6_9STRA (GFO_IDH_MocA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDM6_9STRA)

HSP 1 Score: 292 bits (748), Expect = 3.450e-95
Identity = 144/249 (57.83%), Postives = 175/249 (70.28%), Query Frame = 1
Query:    1 AKEKGVFVMEGMWTRFFPAVEKLTELVNAGLLGDVVALHSDFGFNSTDVADYPSHQMYSHRLGGGGLYYLGPYPVAAAVHAFGASPPARTAVVGVRDDATGVDMAAAXXXXXXVRRRGVAALTYNMMGESPEETVVIGTRGRVRILNPAHCPMALEVHRKREGRGNVERELLEFPLPPPPAAVVVT-------GGFNYPNSEGFAFEARAIHRCVRAGLTHCPQYPPEEVLAVAHILDDMRRQIGLEPV 726
            A+ +G+ ++EGMWTRFFPAVE    LV  G +GDVVA+HSDFGFNSTDVADYP H  Y   +GGGGL Y  PYPVAAA+   GA  P R A  GV+D+ TGVDM+AA        R  +  LTYN++GE+PEET++ GTRGR+RIL PAHCP A+E+  KR GR NVE    ++PLPP P AV          G F YPNS GF +EA A+HRCVRAGL  CPQYPPEE +A   +LD++RRQ+G+EPV
Sbjct:  127 ARARGLLLLEGMWTRFFPAVEHARALVARGAIGDVVAVHSDFGFNSTDVADYPDHLFYRREMGGGGLLYCAPYPVAAALAVLGAGAPTRIAAAGVKDEQTGVDMSAAIALHYAAPR-AIGVLTYNLLGETPEETLIAGTRGRIRILGPAHCPTAMELTLKRPGRANVETRRYDYPLPPEPPAVRAAPAPGGDGGVFFYPNSAGFQYEAAAVHRCVRAGLGACPQYPPEESVATMRVLDEVRRQLGVEPV 374          
BLAST of mRNA_P-wetherbeei_contig19518.2.1 vs. uniprot
Match: D7G6C3_ECTSI (GFO_IDH_MocA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C3_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 1.010e-92
Identity = 137/242 (56.61%), Postives = 178/242 (73.55%), Query Frame = 1
Query:    1 AKEKGVFVMEGMWTRFFPAVEKLTELVNAGLLGDVVALHSDFGFNSTDVADYPSHQMYSHRLGGGGLYYLGPYPVAAAVHAFGASPPARTAVVGVRDDATGVDMAAAXXXXXXVRRRGVAALTYNMMGESPEETVVIGTRGRVRILNPAHCPMALEVHRKREGRGNVERELLEFPLPPPPAAVVVTGGFNYPNSEGFAFEARAIHRCVRAGLTHCPQYPPEEVLAVAHILDDMRRQIGLEPV 726
            A+EKG+F+MEGMWTRFFPAVEK  ELV +G +G VVA+HSDFGFN  DVA+YP H  Y+  LGGGGL+Y+ PYPVAAA+   G + P+R A  GV+D  TGVD++ A         +G+A+LTYN+  E+PEET++IGT GR+++L+PAHCP A+EV  K  GRGN      +FPLP PPA+V  +GGFNYPNS GF FEA AIH+C+R G T   QY P+E+LAV H+L++ R Q+ ++ V
Sbjct:  115 AQEKGLFLMEGMWTRFFPAVEKAQELVKSGTIGKVVAVHSDFGFNGGDVANYPDHIFYNLNLGGGGLFYVAPYPVAAAMQFLGPAFPSRIAAAGVKDKLTGVDLSGAISLHF--EGKGIASLTYNIEAETPEETIIIGTEGRIKLLSPAHCPTAIEVTTKAIGRGNTTTIRHDFPLPDPPASVDASGGFNYPNSNGFQFEAAAIHKCIRGGRTSSDQYTPDEMLAVMHVLEECRTQLKIDSV 354          
BLAST of mRNA_P-wetherbeei_contig19518.2.1 vs. uniprot
Match: W7U2X4_9STRA (Trans--dihydrobenzene--diol dehydrogenase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2X4_9STRA)

HSP 1 Score: 254 bits (650), Expect = 7.890e-80
Identity = 126/244 (51.64%), Postives = 165/244 (67.62%), Query Frame = 1
Query:    1 AKEKGVFVMEGMWTRFFPAVEKLTELVNAGLLGDVVALHSDFGFNSTDVADYPSHQMYSHRLGGGGLYYLGPYPVAAAVHAFGASPPARTAVVGVRDDATGVDMAAAXXXXXXVRRRG--VAALTYNMMGESPEETVVIGTRGRVRILNPAHCPMALEVHRKREGRGNVERELLEFPLPPPPAAVVVTGGFNYPNSEGFAFEARAIHRCVRAGLTHCPQYPPEEVLAVAHILDDMRRQIGLEPV 726
            A+EK +  +EGMWTRFFP VE    L+++G +G VVALH+DFGFNS+D   YP    ++H LGGGGL ++G YP++ A   FG+  P + A  GV D  TGVD++          R G  +A LTYN+MGE+PEET ++GT GR++IL PAHCP  + ++RK +GR NV+    E+PLP P  AV  TGGFNYPNS+GF +EA A  RCV AGL   PQY  EE L VA I+D++RRQ+G+  V
Sbjct:  164 AREKKLLFLEGMWTRFFPVVEMARYLISSGAIGRVVALHADFGFNSSDSEGYPDSPFFNHVLGGGGLLFVGVYPISMAPLCFGSRMPTKIAAAGVVDAPTGVDLSGGVILEYEGGREGGGLAVLTYNLMGETPEETTIVGTEGRIKILGPAHCPTQMVLYRKHKGRRNVQAFDFEYPLPAPLPAVEATGGFNYPNSQGFMYEAAAAQRCVLAGLGETPQYTMEETLIVAKIMDEVRRQLGVRAV 407          
BLAST of mRNA_P-wetherbeei_contig19518.2.1 vs. uniprot
Match: A0A7S2V394_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V394_9STRA)

HSP 1 Score: 224 bits (572), Expect = 9.230e-69
Identity = 115/244 (47.13%), Postives = 158/244 (64.75%), Query Frame = 1
Query:    1 AKEKGVFVMEGMWTRFFPAVEKLTELVNAGLLGDVVALHSDFGFNSTDVAD-YPSHQMYSHRLGGGGLYYLGPYPVAAAVHAFGASPPARTAVVGVRDDATGVDMAAAXXXXXXVRRRGVAALTYNMMGESPEETVVIGTRGRVRILNPAHCPMALEVHRKREGRGNVERELLEFPLPPPPAAVVVTGGFNYPNSEGFAFEARAIHRCVRAGLTHCPQYPPEEVLAVAHILDDMRRQIGLEPVP 729
            AKEKG+F+MEGMWTRFFPAV+K  E+VN+G +G V  ++++F F++    D YP   MYS   GGGG +Y+GPY V+AA  AF    P   +  G+ DD TGVD++AA       +  G+A L Y++  ES EET ++G  GR+ I  P+HCP A+ V +K EGRGNV  E++EFPLP  P  +  +GGF YPNS GF +EA A+   +R G+T  P+Y  EE++    IL  +R Q+G+E  P
Sbjct:  121 AKEKGLFIMEGMWTRFFPAVKKAREIVNSGAIGKVTMVNTEFCFDAISDNDAYPDSDMYSVPKGGGGAWYVGPYVVSAATMAFNGEKPTVISAAGLVDDKTGVDLSAACCLQFGAK--GLATLNYSLQAESLEETRIVGNTGRITINAPSHCPEAITVTKKLEGRGNVSSEVMEFPLPELPECITSSGGFVYPNSMGFMYEAMAVQDYIRKGVTESPEYTHEEMITGMEILCRIRDQVGVESAP 362          
BLAST of mRNA_P-wetherbeei_contig19518.2.1 vs. uniprot
Match: A0A7S0ZAH4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAH4_9RHOD)

HSP 1 Score: 223 bits (567), Expect = 1.260e-67
Identity = 111/237 (46.84%), Postives = 150/237 (63.29%), Query Frame = 1
Query:    1 AKEKGVFVMEGMWTRFFPAVEKLTELVNAGLLGDVVALHSDFGFNSTDVADYPSHQMYSHRLGGGGLYYLGPYPVAAAVHAFGASPPARTAVVGVRDDATGVDMAAAXXXXXXVRRRGVAALTYNMMGESPEETVVIGTRGRVRILNPAHCPMALEVHRKREGRGNVERELLEFPLPPPPAAVVVTGGFNYPNSEGFAFEARAIHRCVRAGLTHCPQYPPEEVLAVAHILDDMRRQI 711
            AK+   F +EG+WTRFFP VE + +++ +  +G +VA+ SDFGFNS +  +YPS  MY   LGGG L Y+G YP++    AFG   P +    G  D    VDM  A        R  +A + Y + GE+ EET V+G++GR+ I  PAHCP+ + V RK++GRGNVE +  EFPLP  P +V  TGGF YPNS GF FEA A+ RC+ AGLT CPQY  ++ L VA I++ +R Q+
Sbjct:  143 AKQHNRFFLEGVWTRFFPIVEYIRQILESNAIGSIVAMQSDFGFNSFEQEEYPSSPMYDKSLGGGALLYVGVYPISMIPFAFGNEKPCQVLATGYFDQKLQVDMNGAISAMYKDGR--IATVMYGLTGETAEETTVVGSKGRIVIHTPAHCPLRMTVFRKKDGRGNVEPQTYEFPLPAIPQSVNETGGFVYPNSFGFQFEAAAVQRCIFAGLTECPQYTTDDSLLVAEIMESVRDQV 377          
BLAST of mRNA_P-wetherbeei_contig19518.2.1 vs. uniprot
Match: A0A7S1CY20_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY20_CYCTE)

HSP 1 Score: 209 bits (532), Expect = 8.650e-63
Identity = 118/272 (43.38%), Postives = 157/272 (57.72%), Query Frame = 1
Query:    1 AKEKGVFVMEGMWTRFFPAVEKLTELV--------NAGLLGDVVALHSDFGFNSTDVADYPSHQMYSHRLGGGGLYYLGPYPVAAAVHAFGASPPARTAVVGVRDDATGVDMAAAXXXXXX---------------------VRRRGVAALTYNMMGESPEETVVIGTRGRVRILNPAHCPMALEVHRKREGRGNVEREL-LEFPLPPPPAAVVVTGGFNYPNSEGFAFEARAIHRCVRAGLTHCPQYPPEEVLAVAHILDDMRRQIGLEPV 726
            AKE+ +F+MEGMWTRFFPAVE+   LV          G+LGDVVA+HSDF FN+ D  +YPS  +Y+H LGGG    + PYP+AAA   F    P    VVG  D  TGVD+  A                           +   GVA L++ M+GES EETVV+GT+GR+ I  P HCP  L V  K +GRG     +  E+PLP     ++ +GG+ YPNS GFA+EA A+ RC+ AG T  PQY  +E L    ++D++R Q+G++P+
Sbjct:   87 AKERHLFLMEGMWTRFFPAVEQARRLVFGGAHDEDGKGILGDVVAVHSDFNFNAADTDEYPSSFLYNHGLGGGASLLVAPYPLAAATLFFPKKEPDSIKVVGQLDGPTGVDLQGAMVLSFPPTPNAIAPAVDDNNNDENTPKLPGAGVATLSFGMLGESIEETVVVGTKGRLTIEAPGHCPTNLTVVLKAQGRGQSGGVVKYEYPLPTDTDEIIKSGGYFYPNSAGFAYEAAAVARCIAAGKTETPQYTLQETLLNIQLIDEIRSQLGVKPL 358          
BLAST of mRNA_P-wetherbeei_contig19518.2.1 vs. uniprot
Match: A0A5J4Z1W6_PORPP (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1W6_PORPP)

HSP 1 Score: 204 bits (520), Expect = 1.150e-60
Identity = 112/238 (47.06%), Postives = 145/238 (60.92%), Query Frame = 1
Query:    1 AKEKGVFVMEGMWTRFFPAVEKLTELV-NAGLLGDVVALHSDFGFNSTDVADYPSHQMYSHRLGGGGLYYLGPYPVAAAVHAFGASPPARTAVVGVRDDATGVDMAAAXXXXXXVRRRGVAALTYNMMGESPEETVVIGTRGRVRILNPAHCPMALEVHRKREGRGNVERELLEFPLPPPPAAVVVTGGFNYPNSEGFAFEARAIHRCVRAGLTHCPQYPPEEVLAVAHILDDMRRQI 711
            A+ K +F +EGMWTRFFPAVE    L+     +G+V  + SDFGFNS +   YP   MY  +LGGG L Y+G YP+AA   AF    P +   VG  D    VDM+ +        R G A+++Y +M ES EET V+GT GR+ I  PAHCP+++ V  K+ GRGNV    L F LP     +   GGFNYPNS GFA+EA A+ RC+ +GL  CPQYPPEE + VA ++D  R Q+
Sbjct:  148 ARAKKLFFLEGMWTRFFPAVEHARHLIFERKEIGEVSQVMSDFGFNSFEQEKYPESPMYDPQLGGGALLYVGVYPLAAVSWAFRGKAPDQLVGVGHYDMQLSVDMSGSLALRYG--RHG-ASVSYGLMCESAEETSVVGTEGRLIIHTPAHCPLSITVSSKKNGRGNVVHNQLSFALPQSTPEIAEAGGFNYPNSIGFAYEAAAVMRCLLSGLLECPQYPPEESIVVAEMMDAARVQV 382          
BLAST of mRNA_P-wetherbeei_contig19518.2.1 vs. uniprot
Match: A0A7S0CJ62_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CJ62_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.220e-59
Identity = 107/269 (39.78%), Postives = 155/269 (57.62%), Query Frame = 1
Query:    1 AKEKGVFVMEGMWTRFFPAVEKLTELV------NAGLLGDVVALHSDFGFNSTDVADYPSHQMYSHRLGGGGLYYLGPYPVAAAVHAFGASPPARTAVVGVRDDATGVDMAAAXXXXXXVRRR--------------------GVAALTYNMMGESPEETVVIGTRGRVRILNPAHCPMALEVHRKREGRGNVEREL-LEFPLPPPPAAVVVTGGFNYPNSEGFAFEARAIHRCVRAGLTHCPQYPPEEVLAVAHILDDMRRQIGLEPV 726
            AKE+ +F+MEGMWTRFFPA+E+    V        G++G+VV + SDF FN++D   YP+  +Y H  GGG  + + PYP+AAA+  F  + P + A VG  D  TGVD+ A                               GVA+L++ + GES EETVVIGT+GR+ + +PAHCP  + V +K  GRG V  ++  EFPLP     +   GG+NYPNS GFA+EA A+ RC+  G   CPQ    + +    ++D+++ Q+G++P+
Sbjct:  103 AKERNLFLMEGMWTRFFPAIEQARRAVFGDGKDQKGVIGEVVMVQSDFNFNASDSEVYPTSPVYKHDQGGGSTFLVAPYPIAAALLFFKGAEPDKIAAVGQMDHNTGVDLQATVALSFPATSNISPALDDSNTDENTPKLPGAGVASLSFGLFGESVEETVVIGTKGRLTVCSPAHCPTKVIVIKKATGRGEVGEKIEYEFPLPADTDEIEKAGGYNYPNSAGFAYEAAAVARCIDKGWIECPQNTLSDTMNSMKLIDEIKAQLGVKPL 371          
BLAST of mRNA_P-wetherbeei_contig19518.2.1 vs. uniprot
Match: A0A7S0YBF2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0YBF2_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.210e-56
Identity = 104/268 (38.81%), Postives = 155/268 (57.84%), Query Frame = 1
Query:    1 AKEKGVFVMEGMWTRFFPAVEKLTELV--NAGLLGDVVALHSDFGFNSTDVADYPSHQMYSHRLGGGGLYYLGPYPVAAAVHAFGASPPARTAVVGVRDDATGVDMAAAXXXXXX-----------------------VRRRGVAALTYNMMGESPEETVVIGTRGRVRILNPAHCPMALEVHRKREGRGNVEREL-LEFPLPPPPAAVVVTGGFNYPNSEGFAFEARAIHRCVRAGLTHCPQYPPEEVLAVAHILDDMRRQIGLEPV 726
            AKEK +F+MEGMWTRFFPAV+K  +L   N  +LG++ ++ SDF FN+ D  +YPS  +Y  +LGGG    +GPYP+AAA   F    P  T  +G  D+ TGV++ +A                             +   GVA L+Y  + E+ EET V+G++GR++I +P HCP  L V  K EGRG + ++L  E+ LP     ++ +GG+ YPNS GF +EA A+ RC+ +G    PQ+  EE +    I++++R Q+G++ V
Sbjct:  132 AKEKDLFIMEGMWTRFFPAVQKARDLALGNESVLGEIASVFSDFNFNAADSEEYPSSFVYQRKLGGGANLLVGPYPIAAATLFFDGRMPEYTKALGQVDEETGVELQSAVVLSFSPTGTEKPLMGNGSDSDSRIIYPKLPGSGVATLSYGFLCETLEETTVVGSKGRMKIESPGHCPTNLTVELKAEGRGQLGKKLSFEYALPSDTEEIIASGGYFYPNSAGFCYEAAAVARCIASGKREAPQFTLEETMLNLKIIEEIRTQLGVKAV 399          
BLAST of mRNA_P-wetherbeei_contig19518.2.1 vs. uniprot
Match: A0A7S3L4R7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4R7_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.590e-56
Identity = 110/270 (40.74%), Postives = 149/270 (55.19%), Query Frame = 1
Query:    1 AKEKGVFVMEGMWTRFFPAVEKLTELV-------NAGLLGDVVALHSDFGFNSTDVADYPSHQMYSHRLGGGGLYYLGPYPVAAAVHAFGASPPARTAVVGVRDDATGVDMAAAXXXXXX--------------------VRRRGVAALTYNMMGESPEETVVIGTRGRVRILNPAHCPMALEVHRKREGRGNVERELL-EFPLPPPPAAVVVTGGFNYPNSEGFAFEARAIHRCVRAGLTHCPQYPPEEVLAVAHILDDMRRQIGLEPV 726
            AKE  VF+MEGMWTRFFPAVEK  +L        + G+LG + A+ SDF FN++D  +YP+   Y+ +LGGG     GPYP+AAA   +    P    VVG  D ATGVD+ A                           +   GVA+L+Y ++ E+ EET ++GT+GR+ I +PAHCP  L V  K +GRG    E + ++PLP    A+   GG+ YPNS GF +EA A+ RC+ AG    PQY   E +    IL+  R Q+G + V
Sbjct:  170 AKENSVFLMEGMWTRFFPAVEKARQLAFGTPGGEDKGVLGQIAAVFSDFNFNASDSEEYPTSFFYNRKLGGGASLLTGPYPIAAATLFYPGMTPDHIKVVGQVDAATGVDLQACISMSFPPTSDVAPAMDAENKEESTPKLPGAGVASLSYGILCETAEETTIVGTKGRMTIKSPAHCPTRLVVTLKADGRGAAAGEFVYDYPLPEDTDAIKAAGGYFYPNSAGFCYEAAAVARCIAAGKLEAPQYTLSETIVAMKILEQARIQLGTKKV 439          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19518.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDM6_9STRA3.450e-9557.83GFO_IDH_MocA domain-containing protein n=1 Tax=Tri... [more]
D7G6C3_ECTSI1.010e-9256.61GFO_IDH_MocA domain-containing protein n=2 Tax=Ect... [more]
W7U2X4_9STRA7.890e-8051.64Trans--dihydrobenzene--diol dehydrogenase n=1 Tax=... [more]
A0A7S2V394_9STRA9.230e-6947.13Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0ZAH4_9RHOD1.260e-6746.84Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1CY20_CYCTE8.650e-6343.38Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A5J4Z1W6_PORPP1.150e-6047.06Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase n=... [more]
A0A7S0CJ62_9STRA1.220e-5939.78Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S0YBF2_9STRA1.210e-5638.81Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S3L4R7_9STRA1.590e-5640.74Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19518contigP-wetherbeei_contig19518:5..1156 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G6C3
PFAMsGFO_IDH_MocA,GFO_IDH_MocA_C
Model size732
Max annot lvl2759|Eukaryota
KEGG rclassRC00066,RC00891
KEGG koko:K00078
KEGG ReactionR01430,R07015
KEGG Pathwayko00040,ko00980,map00040,map00980
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.98e-89
EggNOG OGsCOG0673@1|root,KOG2741@2759|Eukaryota
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-10_001320.1
EC1.1.1.179,1.3.1.20
DescriptionD-xylose 1-dehydrogenase (NADP ) activity
Cds size708
COG categoryV
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186174.9960136-CDS-P-wetherbeei_contig19518:4..2431683186174.9960136-CDS-P-wetherbeei_contig19518:4..243Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19518 5..243 -
1683186175.0052185-CDS-P-wetherbeei_contig19518:576..7431683186175.0052185-CDS-P-wetherbeei_contig19518:576..743Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19518 577..743 -
1683186175.0126388-CDS-P-wetherbeei_contig19518:830..11321683186175.0126388-CDS-P-wetherbeei_contig19518:830..1132Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19518 831..1132 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186175.0199714-UTR-P-wetherbeei_contig19518:1132..11561683186175.0199714-UTR-P-wetherbeei_contig19518:1132..1156Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig19518 1133..1156 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19518.2.1prot_P-wetherbeei_contig19518.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19518 5..1132 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19518.2.1

>prot_P-wetherbeei_contig19518.2.1 ID=prot_P-wetherbeei_contig19518.2.1|Name=mRNA_P-wetherbeei_contig19518.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=236bp
MEGMWTRFFPAVEKLTELVNAGLLGDVVALHSDFGFNSTDVADYPSHQMY
SHRLGGGGLYYLGPYPVAAAVHAFGASPPARTAVVGVRDDATGVDMAAAA
SGGGGVRRRGVAALTYNMMGESPEETVVIGTRGRVRILNPAHCPMALEVH
RKREGRGNVERELLEFPLPPPPAAVVVTGGFNYPNSEGFAFEARAIHRCV
RAGLTHCPQYPPEEVLAVAHILDDMRRQIGLEPVP*
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mRNA from alignment at P-wetherbeei_contig19518:5..1156-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19518.2.1 ID=mRNA_P-wetherbeei_contig19518.2.1|Name=mRNA_P-wetherbeei_contig19518.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1152bp|location=Sequence derived from alignment at P-wetherbeei_contig19518:5..1156- (Phaeothamnion wetherbeei SAG_119_79)
GCCAAGGAGAAGGGCGTCTTTGTCATGGAGGGCATGTGGACTCGCTTCTT CCCGGCAGTGGAAAAGCTTACAGAACTCGTCAACGCCGGCCTCCTAGGGG ACGTCGTGGCGCTCCACTCGGACTTCGGCTTCAACAGCACCGACGTCGCC GACTACCCGTCCCACCAGATGTACAGTCACCGCCTTGGCGGCGGCGGCCT CTACTACCTTGGGCCGTACCCCGTCGCGGCCGCTGTGCATGCCTTCGGCG CCTCGCCGCCCGCCCGCACGGCGGTGGTGGGCGTGCGGGACGACGCCACC GGCGTCGACATGGCGGCCGCCGCCTCGTTGCTCTACCAGAGCGGGGGCAT AGATGCTTCAGCCGACGGCGACGTTGGAGACGGCAGTTCTGGCGGCGGTG CTTCTGGCGGAAGCGGCGGCGGTGGTGTGCGGCGGCGCGGGGTGGCGGCG CTGACTTACAACATGATGGGCGAGAGCCCCGAGGAGACTGTGGTGATCGG CACCCGCGGCCGCGTGCGCATCCTTAACCCGGCGCACTGCCCGATGGCGC TGGAGGTGCACCGGAAGCGGGAAGGACGCGGTGAGTCAAATGCCTGCATC TTTTGCACGGATTGAAAAGGATTTTCCGCCCCATCCATCGCGCGCCGCGC CGATCTCAAGAAGTTCTTTTGGAAGGTTTACTTCCGCTCGGCTTTGCCAT TTCCTTGCCCTTCAAGAGCTTGCTGAATGCCATCCTTTGTGACACATAAG CGAACGCAGAGCAAGGCGCTGCCGCCGTTACCTGCCGCGACTATAAACCT CTCTTAGCATCCCCTCTTTAAAAGAAAATCCTACCATGGGCCGTCCGCTG CCGCTTGGCGCTGCCCGCTGCCACCGCCTGCCACCTGTCATCGCTGCCGC CCACCGCTCGCAGGAAACGTGGAGCGGGAGCTGCTCGAGTTCCCGCTGCC ACCGCCGCCGGCAGCCGTGGTGGTGACGGGCGGCTTCAACTACCCGAACT CGGAGGGCTTCGCCTTCGAGGCGCGCGCCATCCACCGCTGCGTGCGCGCG GGCCTGACGCACTGCCCGCAATACCCGCCCGAGGAGGTGCTCGCGGTGGC GCATATCCTCGATGACATGCGGCGGCAGATCGGGCTCGAGCCCGTGCCGT AG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19518:5..1156-

>mRNA_P-wetherbeei_contig19518.2.1 ID=mRNA_P-wetherbeei_contig19518.2.1|Name=mRNA_P-wetherbeei_contig19518.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=708bp|location=Sequence derived from alignment at P-wetherbeei_contig19518:5..1156- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGGCATGTGGACTCGCTTCTTCCCGGCAGTGGAAAAGCTTACAGA
ACTCGTCAACGCCGGCCTCCTAGGGGACGTCGTGGCGCTCCACTCGGACT
TCGGCTTCAACAGCACCGACGTCGCCGACTACCCGTCCCACCAGATGTAC
AGTCACCGCCTTGGCGGCGGCGGCCTCTACTACCTTGGGCCGTACCCCGT
CGCGGCCGCTGTGCATGCCTTCGGCGCCTCGCCGCCCGCCCGCACGGCGG
TGGTGGGCGTGCGGGACGACGCCACCGGCGTCGACATGGCGGCCGCCGCC
TCCGGCGGCGGTGGTGTGCGGCGGCGCGGGGTGGCGGCGCTGACTTACAA
CATGATGGGCGAGAGCCCCGAGGAGACTGTGGTGATCGGCACCCGCGGCC
GCGTGCGCATCCTTAACCCGGCGCACTGCCCGATGGCGCTGGAGGTGCAC
CGGAAGCGGGAAGGACGCGGAAACGTGGAGCGGGAGCTGCTCGAGTTCCC
GCTGCCACCGCCGCCGGCAGCCGTGGTGGTGACGGGCGGCTTCAACTACC
CGAACTCGGAGGGCTTCGCCTTCGAGGCGCGCGCCATCCACCGCTGCGTG
CGCGCGGGCCTGACGCACTGCCCGCAATACCCGCCCGAGGAGGTGCTCGC
GGTGGCGCATATCCTCGATGACATGCGGCGGCAGATCGGGCTCGAGCCCG
TGCCGTAG
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