mRNA_P-wetherbeei_contig1947.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1947.1.1
Unique NamemRNA_P-wetherbeei_contig1947.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A6H5K446_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K446_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 2.530e-40
Identity = 102/289 (35.29%), Postives = 153/289 (52.94%), Query Frame = 3
Query:   99 WPLWERCVDLLQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLAQICAKLP--RAPE----IPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFWIVQASFVVARLDDSVDWSWWAVFSPVWLAFAGFAALNLLTYHSASVIAANANVA-PGQDPATYTEEQTLKMSVAGDLVGRFYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCARDV-DDGEEAE--HAGGQGPVADPERP-SYGTYSPP 932
            +PL  R + L++W+L+ LFQ+FLT++LD ++ WS+AVV SP+  W G+  + ++      +P  R+ E        G P D E              +   A+ K++ A   + KD  W++Q  F++ +LD  VDW+WW VF P W+   G     L+ Y+    +A N +    G+     T+E+ ++M  A  L+         W+      V+AV  IAGADYS F +F+P ++IAG LLCC  CFICC RD+ D G++A     GG G       P SYGTY+PP
Sbjct:  194 FPLPLRVLALVKWTLLFLFQVFLTMQLDGDIDWSYAVVGSPLLAWMGLLIVGHVYDATRPVPQDRSEESILNAEEEGIPPDVE--------------KREQAIAKRSEARTAVAKDCIWMLQLVFLIIKLDGDVDWNWWLVFLPTWIVLFG----QLVGYYVDYSLARNLSAGIEGKAEEELTQEERVRMVAASQLLVHASXXXXXWVFTVVTVVLAVNAIAGADYSTFVIFIPQFIIAGTLLCCATCFICCIRDLGDQGDDAADPEQGGSGASTSQHPPGSYGTYNPP 464          
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A836CHD5_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD5_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.110e-23
Identity = 88/287 (30.66%), Postives = 125/287 (43.55%), Query Frame = 3
Query:  114 RCVDLLQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLAQICAKLPRAPE-------------------------IPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFWIVQASFVVARLDDSVDWSWWAVFSPVWLAFAGFAALNLLTY----HSASVIAANANVAPGQDPATYTEEQTLK----------------MSVAGDLVGRFYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCAR 839
            R + L QWSL +L QIFLTL+LD N+ WSWA V  P  VW        L +    LPR  +                             G   + E EGA       Q A+ A  +L +  A   L   +  ++Q   ++ RLD  + W WWAV+ P +   A   A  LL Y    H  S + AN       +  T +EE  +K                M  A  L  +  + C +W +   + ++AVA++AGAD+S F +F+P++  AG L+C M C ICC R
Sbjct:  215 RVLGLAQWSLFILQQIFLTLRLDSNITWSWACVLVPWLVWESATLCATLLRAMLPLPREDDQYYQVVRXXXXXXXXXXXXXXXXXXXXXQGILEEGEGEGA-------QDAKRAAVMLVRQKARGELFIKVTRLLQGIMLILRLDHDITWDWWAVWWPTYAYVAFHLASLLLVYLQSLHLLSDLTAN-------EAGTLSEEDAMKASGLFADAAAAGAQACMEFAQMLRSQAKAGCFSWGVLLVMVLLAVAKMAGADFSTFIIFIPVFAAAGCLVCTMSCLICCMR 487          
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A4D9D6L0_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6L0_9STRA)

HSP 1 Score: 103 bits (256), Expect = 4.430e-19
Identity = 83/272 (30.51%), Postives = 118/272 (43.38%), Query Frame = 3
Query:  114 RCVDLLQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLAQICAKLPRAPEIPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFWIVQASFVVARLDDSVDWSWWAVFSPVWLAFAG--------------------FAALNLLTYHSASVI-AANANVAPGQDPATYTEEQTLKMSVAGDLVGRFYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCARDVD---DGE 857
            R ++ +Q S  VLFQ+FLTLKLD  V W W+ +F+P   W G++  +NL          P   ++     EE     AMA  +        VL+              IV  +  + RLD+ +  +WW VF+P+WL FA                      AA+        SV+      V  G + A   E+  L  S A  L        C   +   + ++ VARI GA +SVF VF+P++VI G   C + C +CC RD D   DGE
Sbjct:  199 RVLNAVQLSCNVLFQVFLTLKLDKVVPWDWSRIFAPWLAWEGIQLFRNLTVTSTGGGPTPFATSA-----EEGVLLRAMAVRQAMLGLQHGVLR--------------IVFCALAILRLDEKIRVTWWVVFTPLWLFFATQFVGICVEYALAKRLQEGLIAAAIATAAERGGSVVDPETGEVELGPEEAMIQEQTELMASRASMLA-------CQAAIVLVMALLGVARIEGAHFSVFLVFLPVFVIVGCFTCSLGCAVCCVRDADGVVDGE 444          
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A7S2L9P4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L9P4_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 7.080e-12
Identity = 88/317 (27.76%), Postives = 136/317 (42.90%), Query Frame = 3
Query:    3 LLLYAHNVARGRKP-PEGASPEEEEASAAEAAAWPLWERCVDLLQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLAQICAKLPRAPEI------PASGTPGDEED--EGAAAMAFEEQRARHADAVLK-KAAALNVLLKDMFWIVQASFVVARLDDSVDWSWWAVFSPVWL-----AFAGFAALNLLTYHSASVIAANANVAPGQ----------DPATYTEEQTLKMSVAG--DLVGRFYSSCCTWIL-----GFCVTVVA--VARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCARDVDD 851
             L + + +  G  P PEG  PEEE          P  +R    L+  L V F+I + L+LDD +   W+VVF P++++  +   K +     ++    ++      P S    +E D   G          +  A   LK K  A + LLK  F  V    ++ +LDD +DWSWWAVF+P W+         +  LN+     A+  AA  N   G           D A   ++Q + ++ A   +L  R                F + +V   V +  GA Y+  ++  P+  IAGL+LCC+ C I C RDV +
Sbjct:  177 FLTHLNMLRAGETPRPEG-MPEEEWVDPL-----PYSKRRFIALRHILKVTFEILVALRLDDVIECDWSVVFLPLWIFEALNIRKKMVVANLQILTIEDLEVLLGKPFSEFTPEERDAISGKDFAVVPSMDSPQAMIALKMKTMAQHDLLKIFFRDVFLVLLILQLDDEIDWSWWAVFTPFWILSCCVCCGAYMQLNIA---QAAATAAGVNTDLGNADGTTNYGAFDDAESGQQQGINLTEAEKEELRERXXXXXXXXXXXXXXQAFVLLIVCLLVGKANGAGYAAIWIISPILFIAGLILCCLGCAIYCLRDVPE 484          
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: K3X1J6_GLOUD (J domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1J6_GLOUD)

HSP 1 Score: 78.6 bits (192), Expect = 1.780e-11
Identity = 77/254 (30.31%), Postives = 118/254 (46.46%), Query Frame = 3
Query:  129 LQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLAQICAKLPRAPEIPASGTPG----DEEDEGAAAMAFEEQRARHADAVLKKAAAL-NVLLKDMFWI----VQASFVVARLDDSV-DWSWWAVFSPVWLAFAGFAALNLLTYHSASVIAANANVAPGQDPATYTEEQTLKMSV------AGDLVGRFYSSCCTWILGFCVT--VVAVARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCA 836
            L+ +L+++ QIF+ +KL+ NV WS   VF P FV+ G+  ++ +                G  G     +E EGA   A         DA+ K+   L  V+L +MF I    VQA  +  ++D ++ D SWW VF P+W+    F +  +  Y  A   A N +    ++P   T +   + SV      AG         C    +G   +   +  AR+ G  +S FYV +P ++IAGL+LC    FICCA
Sbjct:  190 LKQALLLVLQIFIAMKLNHNVKWSVMEVFIPYFVYDGLSFVEAIV--------------GGIVGYKVLTKESEGAGVSA--------TDAIKKQRKLLVAVVLLNMFLIASRLVQAVLLALKIDGNLGDASWWLVFFPIWIYVLYFLSHPIKRYIHAKEKAKNQS--KPKEPTLPTHDAYTRESVHEEDEDAGAKYPLMDVLCTIGFIGVITSPYFILTARLDGGSFSAFYVLLPWFIIAGLVLC----FICCA 415          
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A8H7ER49_9FUNG (J domain-containing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7ER49_9FUNG)

HSP 1 Score: 76.3 bits (186), Expect = 9.880e-11
Identity = 68/272 (25.00%), Postives = 119/272 (43.75%), Query Frame = 3
Query:  105 LWERCVDLLQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNL------AQICAKLPRAPEIPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFW-----IVQASFVVARLDDSVDWSWWAVFSPVWLAFAGFAALNLLTYHSASVIAANANVAPGQDPATYTEEQTLKMSVAGDLVGRFYSSCCTWILGFCVTVVAVARIAGADY-SVFYVFMPLYVIAGLLLCCMVCFICC------ARDVDDGEEAE 866
            L+ R + L+ W L++LFQ+F+ L+LDD V WS  V+F+P F   G+  + ++        +  +  +A E    G  G +      A+AF E                       FW     +V    VV R+D ++  SW  VF P++L    +A   +L Y   S +       P  + A   +   +  +VA  ++G  +         + +  +   R+ G  Y S+ +VF+P++++  LL+CC  C + C        D+DD E+ +
Sbjct:  189 LFRRLLYLVYWVLLLLFQVFIVLRLDDKVTWSATVIFAPYFALEGIHFISSVINFAVAVMVFTRQVKADEDYKGGRLGMQ----VLALAFHE-----------------------FWFFVLRLVLFILVVLRIDGTIQCSWAVVFIPLYLVGVKYALQLMLRYRMYSRL-------PQPEIAQQGKITVILGAVAFIIIGTLF---------YALVGLLARRLDGLSYISMSHVFVPVFIVLSLLICCSGCCLPCMLMISSVADLDDPEQQQ 417          
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A433D4F2_9FUNG (J domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D4F2_9FUNG)

HSP 1 Score: 74.3 bits (181), Expect = 4.290e-10
Identity = 77/267 (28.84%), Postives = 119/267 (44.57%), Query Frame = 3
Query:   99 WPLWERCVDLLQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLAQICAKLPRAPEIPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFW----IVQASFVVARLDDSVDW--SWWAVFSPVWLAFAGFAALNLLTYHSASVIAANANVAPGQDPATYTEEQTLKMSVAGDLVGR-FYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAGLLLCC----MVCFICCAR----DVDDG 854
            W  +   V LL +SL+VLFQ+F+ L+LD  V  S A++F P FV   +    N+      L R   I AS       DEG                       L +   + +W    +VQA  +V RLD  +    SW  VF P++L    +A   +L Y + S I       P  + AT  +   +  +VA  L G  FY+     ++G  VT     ++ G+  S+  V +P++++  +LLCC    M C +C +R    D+D+G
Sbjct:  200 WNRFRNAVTLLYFSLIVLFQVFIVLRLDGWVELSAAIIFIPYFVVETINLFPNIFNYILTLQR---ISASA------DEGRLTFTTN----------------LTLFFANFWWFAIRLVQAVLLVLRLDGVIPTTCSWAIVFIPLYLIGLKYAIQLVLAYRAFSRI-------PEFEVATQGKMSVMLGAVALFLFGAPFYT-----VIGLLVT-----KLDGSSISMSNVLIPVFLVLSILLCCAGICMPCMLCVSRASFDDMDEG 424          
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A0P1AZX2_PLAHL (Molecular chaperone (DnaJ superfamily) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZX2_PLAHL)

HSP 1 Score: 74.3 bits (181), Expect = 4.420e-10
Identity = 67/260 (25.77%), Postives = 114/260 (43.85%), Query Frame = 3
Query:  141 LVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLA------QICAKLPRAPEIPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFWIVQASFVVARLDDSVD-WSWWAVFSPVWLAFAGFAALNLLTYHSASVIAANANVAPGQDPATYTEEQTLKMSVAGD---------LVGRFYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCA--RDVDDGEEAE 866
            L+++ QIFL LKL+ +V W+   VF P F + G+  L+ +A      Q+  K      +  + T               +QR+    AV +K      +L ++  IVQ   +  ++D+ +D  SWW +F P+WL    F +  +  Y  A   A    +   Q P  ++ +   + SV  D         LV    +     IL   V +++ AR+    +S  Y+ +P  ++ GL+ C + C I C   +D D  +E E
Sbjct:  196 LLLVLQIFLALKLNQDVNWTLLQVFIPYFGYDGLNLLETIASGYLGYQMLTKTSEGAGVSQTET-------------ITKQRSALVVAVFRK------ILLNIARIVQVILLGLKVDEELDDTSWWLIFLPIWLYLVYFGSYPIRKYLRAKAKAKEPKI---QSPQQHSHDAYTRESVKNDEDEVTSKYPLVDALCTLSVIGILSSPVFILS-ARLQNESFSTIYILLPWLILVGLVFCIICCAISCFSFQDPDTNQEPE 432          
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A2P6NS88_9EUKA (Acetate--CoA ligase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NS88_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 1.670e-9
Identity = 71/260 (27.31%), Postives = 117/260 (45.00%), Query Frame = 3
Query:  120 VDLLQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLAQICAKLPRAPEIPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFWIVQASFVVARLDDSVDWSWWAVFSPVWLAFAGFAALNLLTYHSASVIAANANVAPGQDPATYTEEQTLKMSVAGDL---VGRFYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCARDVDD--GEEAEHAGGQG 884
            V   Q++  + FQI L + L+ +  WSWAV F P+++  G++ +K L  I  K   A E+ +          G A+  F      +    L+K   + +L+    W     F+VA++  ++ WSWW +  P+WL+ A    + ++   + +      N AP  D     EEQ  + SVA  L   VG        + L   + +V +        +V   F+P+++IAGL+LCC +C   C        GEE E    +G
Sbjct:  910 VGAAQYAAALSFQIMLVINLETH-RWSWAVAFIPLYIVLGLQFIKKLNSI-KKAKFASEMAS----------GVASFKF---GLGYFGWCLRKFVFILLLI----WFT--GFLVAKISTTITWSWWVIAIPIWLSIAYRMFITIMDGKAIT------NAAPSTDD----EEQDGRQSVAKALNIVVGVML----VFALVLAILIVVILEYGRIKLAV--AFIPIFIIAGLVLCCFMCTAPCXXXXXXAAGEEGEQPDEEG 1132          
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: F0WUA8_9STRA (Uncharacterized protein AlNc14C268G9929 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WUA8_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.480e-9
Identity = 72/263 (27.38%), Postives = 112/263 (42.59%), Query Frame = 3
Query:  132 QWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFV-----WY-----GVRCLKNLAQICAKLPRAPEIPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFWIVQASFVVARLD-DSVDWSWWAVFSPVWLAFAGFAALNLLTYHSASVIAANANVAPGQDPATYTEEQTLKMS-VAGDLVGRFYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCA------RDVDDGEEAE 866
            +WSL+VL QIF+ L+LD ++ W+  V+  P F+     W+     G + L  L + C                  E +G  AM   +Q+      +L+K  A  VL+  +  I+Q   V A+LD D    SWW +F P+W          +L Y  + + +     AP  D    +E  T   + V   LVG    +    +L         AR+    +S  ++ +P  V+ G+LLC + C I C        DV+  EE E
Sbjct:  190 KWSLLVLVQIFIALRLDHDLSWNSRVILLPYFIFDLLTWFEIVIDGYKELSMLKEQC------------------EIDGVQAMDLIQQQ---RSGLLRKIRARLVLV--LLRILQVLLVTAKLDGDLGSTSWWLIFIPIWTVIGHHLLQPVLKYLLSVLQSRQKRDAPEADQFASSESSTFSATDVIYPLVGVSILASPYVLLS--------ARLQSEHFSTLFIILPWLVLIGMLLCLVCCVITCLGFRPRHEDVEFSEEDE 421          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5K446_9PHAE2.530e-4035.29J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A836CHD5_9STRA2.110e-2330.66J domain-containing protein n=1 Tax=Tribonema minu... [more]
A0A4D9D6L0_9STRA4.430e-1930.51J domain-containing protein n=2 Tax=Monodopsidacea... [more]
A0A7S2L9P4_9STRA7.080e-1227.76Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
K3X1J6_GLOUD1.780e-1130.31J domain-containing protein n=1 Tax=Globisporangiu... [more]
A0A8H7ER49_9FUNG9.880e-1125.00J domain-containing protein n=1 Tax=Apophysomyces ... [more]
A0A433D4F2_9FUNG4.290e-1028.84J domain-containing protein n=1 Tax=Jimgerdemannia... [more]
A0A0P1AZX2_PLAHL4.420e-1025.77Molecular chaperone (DnaJ superfamily) n=1 Tax=Pla... [more]
A0A2P6NS88_9EUKA1.670e-927.31Acetate--CoA ligase n=1 Tax=Planoprotostelium fung... [more]
F0WUA8_9STRA2.480e-927.38Uncharacterized protein AlNc14C268G9929 n=1 Tax=Al... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1947contigP-wetherbeei_contig1947:985..6051 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G6F0
PFAMsDnaJ,Tmemb_185A
Model size2789
Max annot lvl2759|Eukaryota
KEGG koko:K10752
KEGG Pathwayko04218,map04218
Hectar predicted targeting categoryother localisation
Exons8
Evalue4.81e-29
EggNOG OGsCOG0484@1|root,KOG0714@2759|Eukaryota
Descriptionprotein folding
Cds size807
COG categoryO
BRITEko00000,ko00001,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1947.1.1prot_P-wetherbeei_contig1947.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1947 3459..5336 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186173.3489962-UTR-P-wetherbeei_contig1947:984..12051683186173.3489962-UTR-P-wetherbeei_contig1947:984..1205Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1947 985..1205 -
1683186173.358819-UTR-P-wetherbeei_contig1947:1505..16191683186173.358819-UTR-P-wetherbeei_contig1947:1505..1619Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1947 1506..1619 -
1683186173.3665946-UTR-P-wetherbeei_contig1947:1938..20261683186173.3665946-UTR-P-wetherbeei_contig1947:1938..2026Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1947 1939..2026 -
1683186173.3741348-UTR-P-wetherbeei_contig1947:2246..34581683186173.3741348-UTR-P-wetherbeei_contig1947:2246..3458Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1947 2247..3458 -
1683186173.430106-UTR-P-wetherbeei_contig1947:5336..54171683186173.430106-UTR-P-wetherbeei_contig1947:5336..5417Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1947 5337..5417 -
1683186173.44599-UTR-P-wetherbeei_contig1947:5785..60511683186173.44599-UTR-P-wetherbeei_contig1947:5785..6051Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1947 5786..6051 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186173.381765-CDS-P-wetherbeei_contig1947:3458..37571683186173.381765-CDS-P-wetherbeei_contig1947:3458..3757Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1947 3459..3757 -
1683186173.39437-CDS-P-wetherbeei_contig1947:4118..43441683186173.39437-CDS-P-wetherbeei_contig1947:4118..4344Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1947 4119..4344 -
1683186173.4041371-CDS-P-wetherbeei_contig1947:4656..48721683186173.4041371-CDS-P-wetherbeei_contig1947:4656..4872Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1947 4657..4872 -
1683186173.419531-CDS-P-wetherbeei_contig1947:5270..53361683186173.419531-CDS-P-wetherbeei_contig1947:5270..5336Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1947 5271..5336 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1947.1.1

>prot_P-wetherbeei_contig1947.1.1 ID=prot_P-wetherbeei_contig1947.1.1|Name=mRNA_P-wetherbeei_contig1947.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=269bp
MAFEEQRARHADAVLKKAAALNVLLKDMFWIVQASFVVARLDDSVDWSWW
AVFSPVWLAFAGFAALNLLTYHSASVIAANANVAPGQDPATYTEEQTLKM
SVAGDLVGRFYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAG
LLLCCMVCFICCARDVDDGEEAEHAGGQGPVADPERPSYGTYSPPAPATD
GKAPGPTAAADSLEEGKVGGGGGGVPAEELRLAGPPRPPSLRGNEGPASA
PLPPGTGIGIGGVSVDLD*
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mRNA from alignment at P-wetherbeei_contig1947:985..6051-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1947.1.1 ID=mRNA_P-wetherbeei_contig1947.1.1|Name=mRNA_P-wetherbeei_contig1947.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5067bp|location=Sequence derived from alignment at P-wetherbeei_contig1947:985..6051- (Phaeothamnion wetherbeei SAG_119_79)
TCTTGCTACTGTACGCCCACAACGTGGCGCGCGGCCGCAAGCCGCCTGAG GGCGCCTCCCCCGAGGAGGAGGAGGCGTCGGCGGCCGAGGCGGCGGCGTG GCCGCTCTGGGAGCGCTGCGTCGACTTGCTGCAGTGGTCGCTCGTCGTTC TCTTCCAGATCTTTCTGACGCTGAAGCTCGACGACAATGTCGGCTGGTCG TGGGCAGTCGTCTTTTCGCCCGTCTTTGTTTGGTACGGCGTCCGCTGCCT CAAGAATCTCGCGCAGGTGAGGTTTCTGTTTTGTGCGGCGTTTGGCTTTG GGCGGTTGACTCCAAGTGGTTGGTGGTTGTGGAGTTAGCTCCGGGCGCAG TGCATCGGGGCAACGATGTGCGGTTGCGCGGCGGGGCCTGCTTCTTTCCT TTCTGCGCGGGTGCAGTCTGCGAGTTTCCTTCTACTTTGTGATAAGCGTC TTGGTGCCTGCGCCCCCATCATTTGGTTACGCATGCACCAATGTAGGTTT GAAGGCGGACCGTGGCAGGAGTTGCTGGCTTTCTTTCCTCGTCTTCCATC TGAAGCCCGCGGCATGATGTGCAGGCAATCCTCAACCCTTTCGACCGCTG TTCCCTGCCTGCAAAATTCTGCCTTGCCCCGCAGATCTGCGCCAAGCTGC CGCGGGCGCCGGAGATCCCGGCATCGGGGACGCCGGGCGACGAGGAGGAC GAAGGCGCGGCCGCGATGGCTTTCGAAGAGCAGCGCGCACGCCACGCCGA CGCTGTCCTGAAGAAGGCTGCCGCCCTCAACGTGAGTCCGTCTGGAGTGT GTTCTGGGTATGCATAGAGTCTGGAATGTGTAGCCGGCAGACTGGCTACC GGCTGTTGCGGGTTGCGGTTTAGTCGAAGTTTGACCAATTGATGATTGCA GCCCGGCAGGAATGAGCTGGTTTGCGAGGTGGTTTGCGGCGGGTGTTCGG CGCGTGCTGCGGAAGAAGCAAAGAAAGCAGTGCTAGCGGGATCGACCTTT CTCTTGCCTCGATCAATTTTGTTTTTCGGCTCCGTTTCTGTCGGCACCGG GCAGGCGCAGGGGAGATTCTCAGCGGGCTCGCGTGGAGTTAGGGGAAGAA GCTTTGCCTCGTCCTTCATCACAATATCTTCACTTTTGCGCTCCTCCGCT TCCCGCTCCTACCCGCCATCCCCCGGCAGGTCCTGCTGAAAGACATGTTC TGGATCGTGCAGGCGTCCTTTGTGGTGGCGCGGCTGGACGACTCGGTGGA CTGGAGCTGGTGGGCCGTCTTCTCACCCGTATGGCTCGCCTTCGCGGGCT TCGCGGCGCTGAACCTTTTGACATATCACAGCGCATCGGTCATCGCCGCC AATGCCAACGTTGCGCCGGGCCAGGACCCAGCCACCTATACAGAGGTTAG TCAGTCCTTCTTTTTCGTTACCCGCTTTAGAGAGGAGGGAGAAGGTTTTA CTGTGCTGCGAGGTGGCGCTTTCCTCTTCTTTTTGTGTTTTGAAGAGATG CCTCGACCATGTGCATTCAGGTCGGTTCTGCCTCGCGTTGCCGTATTGGG AAGGTTTAATGTTCTGATTAATGCTGCAGCCTTCTCCTTGCTTTCTTGCT TGAGTTCGGGCACGTCAAAGGTTTTCCATACTCGAATCGTATCCATTCCA TTCAAGTTTTCTTATTCTTCTGTTGGGCATATCAATTTTGTGTCGCTGCC GCCGCAGGAGCAAACGCTCAAGATGTCGGTGGCGGGCGACCTCGTGGGCC GCTTCTACTCCTCGTGCTGCACGTGGATTCTCGGATTCTGTGTGACGGTG GTGGCCGTGGCGCGCATCGCCGGCGCTGACTACTCTGTCTTCTATGTCTT CATGCCGCTGTACGTCATCGCCGGCCTGCTGCTGTGCTGCATGGTGTGCT TCATCTGCTGCGCACGCGACGTCGACGACGGCGGTGAGGCGTTGTCGGAA GTCGGCTGGAAGTTGGCTGTCCTGTCCTGTCCGACTAGCTTGTCTGTCAG TCAGCCAGCTCTGATCGGATCCGATTCTGTTTTGCCGGTCCTGATCAAAT AATTTGGCGTCGCTGGCGAGTCGGCCGTTGCGTTGTTCCTATGTCATCAC GATAACAGCGCGAAGTTTGCTTTCTTCTGTATTTCATGCTTCGCGCTTCC CGACCAGAGCCAGCGTAAGCTGCCATTCTTTCACCAGGCCCCGCTTGGTC TGTGCTCTTTCGCCGTCCTCATGCTGACGCTCTTTCCTATTCTGGACCTC TTTTCTTACTTATCCCTGCCCCGGCTCAATTCCTCCCTCTGCAGAAGAAG CGGAGCACGCGGGAGGGCAGGGGCCCGTTGCCGACCCGGAGCGGCCAAGT TACGGAACATATAGCCCGCCGGCGCCGGCGACAGACGGAAAAGCACCGGG GCCGACTGCAGCGGCCGACAGCCTCGAAGAGGGCAAAGTCGGCGGCGGCG GCGGTGGCGTACCGGCGGAGGAGCTGCGGCTGGCGGGGCCGCCGCGGCCA CCGTCGCTGCGGGGCAACGAGGGACCGGCATCGGCGCCGCTGCCGCCGGG CACAGGGATAGGCATTGGCGGCGTGTCTGTTGACCTCGATTGAGGGCAGG GCATATGCCAAGCAAAGCGAAACAAAGCCGGCGCCGCTGCTGCCCGGCTG CTTCAACAGATGCGGCTGCAGCAACCGTCGGACCTGCCGTCGGAGCGGCT GAGGCGGCGGTGGTGGCACAGCGCAAAATAGGCGAAAGTAGAAAGAAAGC GGCTTCTGGGGTAGGAACGGTGATGCTGCCGCGTGGCGGAGCGGCAACTC GTTTATCTACCAGGCGGCGTGGCGGACCGCGAGGAGTGTTTTGAGGCGAG AAAAGCAAGTGGAGAAGAATAGGGCGAAGTGGAGAGGCAGACCTTTTGAG CCTGTACAGAGTGAGCGGTGCATTGGGGCTGGACGTTGGCACGCCGGCGC TGTGAAGTCAAGAGAGGAGGCGAAAAAATGCGAGCATGTCTTTTTTACTC AAGCGGCTCTGGGCTGCGGTCAGCCGTCCATGTGACGGCAAAACCGGCCC GACCCTCTGCTCTCTGTTTTTTCGCGGGACACTAAGCCCGCAGCGCCACC CCCAAGGATCGCATGTGAACCGGACGGCCTTCGCGGCTGCTGCTGCCGCT ACGGGCTATCCAGCTGCCACCGGTGCTGTTACGGAGGCTGTGGATCCCAC CAGTCCTTCCGCCAGTCTTGGTGCTGTCGGCACCGGCGCTGTGAGCGCTA CCGATGCTGCTTCCGGCTCTTCTCCGGGATTCGATGCGCGCGCCGGGAGC CTTGGCGACAGCGGCTGCCGCCGGAGCAGGGGCGACGTCGGCAGGATCGG TGCTGCGTCGGCGATGGCTGTTGGCGCCGGCTCTGATGTCGTTGGAGCTG CTGCCCGAGCCCTTTGCGACACACGCTTCATCTGCGGTCCCGCCATCGCC ATTGCCGCCGAGGCGGACGCAGCGGCCGCCGGCGTTGATGCAACCGCTTT CCAAAGGCGCCGCCGTCAATACTGCGACGGCAGCGGGTTCGGCGCCGGCG ACCGCCCACACCGGCAGGAATCGGTGCAGCCGCTCATCCAGAGCGGCGGA CCACGTAACAGAGAGCACTTCCGGAACTTCCTGCCGGAACGTAACGGAAG AGGGGTTGCGGCGTGGGACGGCGGTGACGGCGGCGGCAGTGAGATTCGGC GCCGGATGCGGCAGCGTCTCTGCGGGGAAAGAGGGCCGGGCCGGGTTGAA ATGCGCTGTCCACCCAGTTTTGGTACCGAAGGCCGACCCAAGATAAGCAA CAAAGGTAGAGAGGGGCCGCGCAGGCGGTGTGCAGGGGGGCGGGAAGGGA TTGCGTTCTGTATGCTGGCCCAAGCTCTCTTTCCATGATTCAGTGTCGAG CACCAGGCAATGAATTTCTTTTCAGTAACACAATGAAACGAAACGTTCCT CGCTTGAATGAAGCTCTCACAGAGCTTGCGTGTATTCTGCATTTTCGCTT CTTACCTGCGTGAATTCTTCGGCAGTCGTATCGGCCCAGCATATGCCGCG GTATGGAGCCATTTCTATTGCCGTGGCAAAAAGCGGCGCCAGCACGGAAG ACCGCCTGTCCACGTATACCTGCGCGCGGGGAATTTCATTATGTCAGGGT TTTGAGCGGTTGGATAGTTGAAAGGCGGCAGTGTTAGAGCCACTACAAAC CGCCGACAGACACAGAAAAGTCAACGGCCGTTCGCACACCTGCTAGGCAG AGCCACAGACCAAAAAACGCTGTTAAGACCGCAAACAATGTCCCCATTCA GAATTCGCTTTCGCAGAGCTCAGGCAACAGTTTCAGAAAACAAAGTGAGG CGGGGCTGCGGTGGCTGGCACAGTGCGACGTGGCCCCGAGGAAAGTTTAC AAAAGGAAACTCCGGCATGCTTGCAGTCGGAGGCTCACCATAAATGCATC CCACGCCGCGTCGCCGTGACCGTGTACCGCCGCGCTCAAGTGCAGCAGAA ACTCTAGCGTGGCCGCCGGCCCGTGTGCTGGATGGCTCTGGTCCTGCAAA TTTGCAACGCCGCCAGTAGGACGGCAGAGGGGGAGAAGCCTTTGCTATCA CGAAAATGCTGGTTCGTATCCAGATCAGCTCCTTCAACGCGGGAACGATG CAAGTTCAGTCGTCCAAGGCCGCGCTCCTGCTCCTCACTGGTTCAAAGTC AACCATCAGCCAATCGCTCCCGCCAAATAGAGGTTTTTCAGAAGTCTTCC GTTCCGCCGGGCTGCGATGGGAAACGGCGACTGCTCTTCGCCGGGGCTGC AGGCGGAGAGCAAATGGGAAAGGCCGGAACTTAGCACGCTTACCTGGCAG ACTGCCGGCGGTACTCCTTCACGCCAAAGCTCCAGAAGACGTGTCGCTGC GGGTAGCGTAGTAGTGACCCGAAGAAAAGTGAACTCGCCATTCTCGGCTG CTCGGTCTTGAGCCGCTGCTGGCTCCGATGGGATTGAGGCAGCGGATACC GATGCTCTTTCAACTGGGGCGCTGTCATCGCCGTCGCCGCCGCTGCCACA GATGCTCCCGCCGCCAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1947:985..6051-

>mRNA_P-wetherbeei_contig1947.1.1 ID=mRNA_P-wetherbeei_contig1947.1.1|Name=mRNA_P-wetherbeei_contig1947.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig1947:985..6051- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTTTCGAAGAGCAGCGCGCACGCCACGCCGACGCTGTCCTGAAGAA
GGCTGCCGCCCTCAACGTCCTGCTGAAAGACATGTTCTGGATCGTGCAGG
CGTCCTTTGTGGTGGCGCGGCTGGACGACTCGGTGGACTGGAGCTGGTGG
GCCGTCTTCTCACCCGTATGGCTCGCCTTCGCGGGCTTCGCGGCGCTGAA
CCTTTTGACATATCACAGCGCATCGGTCATCGCCGCCAATGCCAACGTTG
CGCCGGGCCAGGACCCAGCCACCTATACAGAGGAGCAAACGCTCAAGATG
TCGGTGGCGGGCGACCTCGTGGGCCGCTTCTACTCCTCGTGCTGCACGTG
GATTCTCGGATTCTGTGTGACGGTGGTGGCCGTGGCGCGCATCGCCGGCG
CTGACTACTCTGTCTTCTATGTCTTCATGCCGCTGTACGTCATCGCCGGC
CTGCTGCTGTGCTGCATGGTGTGCTTCATCTGCTGCGCACGCGACGTCGA
CGACGGCGAAGAAGCGGAGCACGCGGGAGGGCAGGGGCCCGTTGCCGACC
CGGAGCGGCCAAGTTACGGAACATATAGCCCGCCGGCGCCGGCGACAGAC
GGAAAAGCACCGGGGCCGACTGCAGCGGCCGACAGCCTCGAAGAGGGCAA
AGTCGGCGGCGGCGGCGGTGGCGTACCGGCGGAGGAGCTGCGGCTGGCGG
GGCCGCCGCGGCCACCGTCGCTGCGGGGCAACGAGGGACCGGCATCGGCG
CCGCTGCCGCCGGGCACAGGGATAGGCATTGGCGGCGTGTCTGTTGACCT
CGATTGA
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