mRNA_P-wetherbeei_contig19369.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19369.1.1
Unique NamemRNA_P-wetherbeei_contig19369.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19369.1.1 vs. uniprot
Match: A0A847ZYC4_9HYPH (SDR family oxidoreductase n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZYC4_9HYPH)

HSP 1 Score: 369 bits (946), Expect = 8.070e-126
Identity = 173/279 (62.01%), Postives = 219/279 (78.49%), Query Frame = 1
Query:   13 VNHFLCFGFGFSARTLAVRLDKQVWKISATSRDAEGVAEIEAQGFHGLPFDSTLRIAPDVTHLLISAPPDEHGDPVLRLFQAQLQRLSKSLKWVGYLSTTGVYGDRGGDWVDEESPLEPTTARGERRLEAERNWLRLHKEFGVPVHLFRLAGIYGPGRNTLLTVRDGSAKRVIKPGQIFSRVHVEDIAGVIAASIAKPNPGRAYNLCDDEPCPPQEVVAYAANLLGLPLPPEIPFEEAGLSPMSKSFYADSKRVSNKRIKTELGYKLIYPNYRDGLRAL 849
            +NH L FGFGFSA+ LA RLD+++W+I+ TSR  +G   I+A+G+ G+ FD    I   VTH++ S PPD  GDPVLR F   LQ  ++ L+WV YLSTTGVYGD GG W DE +PL P T RG+RRL AE  W++L +  G+P+H+FRLAGIYG GRN LL+VRDG+AKRV+KPGQIFSR+HVEDIAG++ AS+A+P PG AYN+ DDEPCPPQ+VV YAA LLGLP+PP++ FE A LSPM++SFYADSKRVSN ++K+ELGY+  +P+YR GL AL
Sbjct:    1 MNHILFFGFGFSAQALARRLDQKLWRITGTSRSKDGTHAIQARGYEGVVFDKLAAIPASVTHIVSSVPPDAEGDPVLRRFDHDLQASARRLQWVAYLSTTGVYGDHGGAWTDENTPLTPNTERGDRRLGAETAWMKLQQADGLPLHIFRLAGIYGVGRNQLLSVRDGTAKRVVKPGQIFSRIHVEDIAGILLASMARPQPGSAYNVADDEPCPPQDVVEYAARLLGLPVPPDVAFEAAQLSPMARSFYADSKRVSNAKVKSELGYRFHFPSYRAGLAAL 279          
BLAST of mRNA_P-wetherbeei_contig19369.1.1 vs. uniprot
Match: A0A7Y2BSC4_9HYPH (SDR family oxidoreductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2BSC4_9HYPH)

HSP 1 Score: 341 bits (875), Expect = 5.910e-115
Identity = 168/283 (59.36%), Postives = 211/283 (74.56%), Query Frame = 1
Query:   13 VNHFLCFGFGFSARTLAVRLDKQVWKISATSRDAEGVAEIEAQGFHGLPFDSTLRIAP----DVTHLLISAPPDEHGDPVLRLFQAQLQRLSKSLKWVGYLSTTGVYGDRGGDWVDEESPLEPTTARGERRLEAERNWLRLHKEFGVPVHLFRLAGIYGPGRNTLLTVRDGSAKRVIKPGQIFSRVHVEDIAGVIAASIAKPNPGRAYNLCDDEPCPPQEVVAYAANLLGLPLPPEIPFEEAGLSPMSKSFYADSKRVSNKRIKTELGYKLIYPNYRDGLRAL 849
            + H  CFG G+SA  LA RL    WK++ T R  E  A + A G+  +PFD +  + P    +VTHL+ S PP + GDPVL     Q+ R +  ++W GYLSTTGVYGDR G WVDE S L P+T RG RRLEAE  WL LH + G+PVHLFRLAGIYGPGRN L +VR G+A+RVIKPGQ+FSR+HV+DI+GV+AASI +P+PG AYN+CDDE  PPQ+VVA+AA LL +  PPE+ FE A +SPM +SFYA+SKRVSN+RIK +LGY+LIYP+YR+GL+AL
Sbjct:    1 MKHLFCFGMGYSAAALACRL-ADGWKVTGTYRSQEAKASLAAAGYGQVPFDGSAALPPGALDEVTHLVSSIPPGKDGDPVLTSCTTQIVRHAGHIEWAGYLSTTGVYGDRAGGWVDETSELTPSTERGRRRLEAESGWLALHTKHGLPVHLFRLAGIYGPGRNQLESVRKGTARRVIKPGQVFSRIHVDDISGVLAASIDRPDPGTAYNVCDDEAAPPQDVVAHAAELLKVDAPPEVDFEAAEMSPMGRSFYAESKRVSNERIKHDLGYELIYPSYREGLKAL 282          
BLAST of mRNA_P-wetherbeei_contig19369.1.1 vs. uniprot
Match: UPI0019089C03 (SDR family oxidoreductase n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI0019089C03)

HSP 1 Score: 337 bits (865), Expect = 1.210e-113
Identity = 171/277 (61.73%), Postives = 204/277 (73.65%), Query Frame = 1
Query:   19 HFLCFGFGFSARTLAVRLDKQVWKISATSRDAEGVAEIEAQGFHGLPFDSTLRIAPDVTHLLISAPPDEHGDPVLRLFQAQLQRLSKSLKWVGYLSTTGVYGDRGGDWVDEESPLEPTTARGERRLEAERNWLRLHKEFGVPVHLFRLAGIYGPGRNTLLTVRDGSAKRVIKPGQIFSRVHVEDIAGVIAASIAKPNPGRAYNLCDDEPCPPQEVVAYAANLLGLPLPPEIPFEEAGLSPMSKSFYADSKRVSNKRIKTELGYKLIYPNYRDGLRAL 849
            H  CFG GF+ + LA RL  Q W ++ TSR A G   +   G   LP  +       VTHLLIS PP   GDPVL      LQ+ +    W GYLSTTGVYGDR GDWVDE SPLEP+T RG RRL AE +W  L    G+P+H+FRLAGIYGPGRN L+++ DG+AKR++KPGQIFSR+HVEDIAGV+ ASIA+P+PG+AYN+CDDEPCPPQ+VVAYAA LL    PPEI F +A LSPM+KSFYA+SKRVSN+R+K ELGYKL+YP YR+GL AL
Sbjct:    3 HLFCFGLGFTGQALARRLSAQGWTVTGTSR-AGGDGTLAFDGSAPLPMSAL----DGVTHLLISVPPGTQGDPVLNRHAEDLQKRAAQFHWAGYLSTTGVYGDRHGDWVDETSPLEPSTERGHRRLAAETHWQSL----GMPLHIFRLAGIYGPGRNQLVSILDGTAKRIVKPGQIFSRIHVEDIAGVLWASIARPHPGQAYNVCDDEPCPPQDVVAYAAALLKREAPPEIAFADADLSPMAKSFYAESKRVSNQRMKEELGYKLLYPTYREGLAAL 270          
BLAST of mRNA_P-wetherbeei_contig19369.1.1 vs. uniprot
Match: A0A2W2AVU7_9HYPH (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2AVU7_9HYPH)

HSP 1 Score: 337 bits (865), Expect = 1.890e-113
Identity = 170/283 (60.07%), Postives = 204/283 (72.08%), Query Frame = 1
Query:   13 VNHFLCFGFGFSARTLAVRLDKQVWKISATSRDAEGVAEIEAQGFHGLPFDSTLRIAPD----VTHLLISAPPDEHGDPVLRLFQAQLQRLSKSLKWVGYLSTTGVYGDRGGDWVDEESPLEPTTARGERRLEAERNWLRLHKEFGVPVHLFRLAGIYGPGRNTLLTVRDGSAKRVIKPGQIFSRVHVEDIAGVIAASIAKPNPGRAYNLCDDEPCPPQEVVAYAANLLGLPLPPEIPFEEAGLSPMSKSFYADSKRVSNKRIKTELGYKLIYPNYRDGLRAL 849
            +NH L FG GFSAR LA RL  + W +SATSR   G A I A+G+    FD +  +  +    VTH++ SAPP E GDPVLR         +K  +WV YLSTTGVYGD GG  V E++PL P T RG +RL AE  WL L ++ G+PV +FRLAGIYGPGRN LL++ DG+AKRVIK GQIFSR+HV DIA  + ASIA P PGRAYN+CDDE CPPQ+VVAY A LLGLP+PP++ FE A LSPM++SFYADSKRVSN RI TELG +L YP YR+GL A+
Sbjct:    1 MNHILFFGLGFSARVLAERLAAKGWTVSATSRSEAGAAAIRARGYRAFVFDGSRPLPQEAFDGVTHMVDSAPPGEDGDPVLRWHARDAAARAKQFQWVAYLSTTGVYGDHGGGLVTEDTPLTPNTERGHKRLLAENQWLALWRDHGLPVMIFRLAGIYGPGRNQLLSLLDGTAKRVIKQGQIFSRIHVADIANTLEASIAHPQPGRAYNVCDDEACPPQDVVAYGATLLGLPVPPDVSFEAADLSPMARSFYADSKRVSNARIVTELGVRLSYPTYREGLTAI 283          
BLAST of mRNA_P-wetherbeei_contig19369.1.1 vs. uniprot
Match: A0A6G6WTR6_9HYPH (SDR family oxidoreductase n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6WTR6_9HYPH)

HSP 1 Score: 336 bits (861), Expect = 4.900e-113
Identity = 171/282 (60.64%), Postives = 205/282 (72.70%), Query Frame = 1
Query:   19 HFLCFGFGFSARTLAVRLDKQVWKISATSRDAEGVAEIEAQGFHGLP---FDSTLRIAPDVTHLLISAPPDEHGDPVLRLFQAQLQRLSKSLKWVGYLSTTGVYGDRGGDWVDEESPLEPTTARGERRLEAERNWLRLHKEFGVPVHLFRLAGIYGPGRNTLLTVRDGSAKRVIKPGQIFSRVHVEDIAGVIAASIAKPNPGRAYNLCDDEPCPPQEVVAYAANLLGLPLPPEIPFEEAGLSPMSKSFYADSKRVSNKRIKTELGYKLIYPNYRDGLRALKA 855
            H  CFG GF+ + LA RL  + W ++ TSR  E    +   G   LP   FD        VTHLLIS PP   GDPVL      L++ ++  +W GYLSTTGVYGDR GDWVDE SPL PTT RG+RRL AE  W     E G+P+H+FRLAGIYGPGRN L+++ DG+AKR++K GQIFSR+HVEDIAGV+ ASIA+P+P RAYN+CDDEPCPPQEVVA+AA LL  P PPEI F+ A LSPM+KSFYA+SKRVSNKRIK ELGY+L++P YR+GL AL A
Sbjct:    3 HLFCFGLGFTGQALARRLTAKGWTVTGTSRSGEN-GTLAFDGSTALPQSAFDG-------VTHLLISVPPGPQGDPVLSRHADDLRQRARQFQWAGYLSTTGVYGDRHGDWVDETSPLTPTTERGQRRLAAETQW----HELGLPLHIFRLAGIYGPGRNQLVSILDGTAKRIVKQGQIFSRIHVEDIAGVLEASIARPDPERAYNVCDDEPCPPQEVVAFAAELLDRPPPPEIAFDAAALSPMAKSFYAESKRVSNKRIKQELGYRLLFPTYREGLTALLA 272          
BLAST of mRNA_P-wetherbeei_contig19369.1.1 vs. uniprot
Match: A0A848YD38_9HYPH (SDR family oxidoreductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A848YD38_9HYPH)

HSP 1 Score: 333 bits (854), Expect = 9.470e-112
Identity = 161/285 (56.49%), Postives = 207/285 (72.63%), Query Frame = 1
Query:   13 VNHFLCFGFGFSARTLAVRLDKQVWKISATSRDAEGVAEIEAQGFHGLPFDSTLRI------APDVTHLLISAPPDEHGDPVLRLFQAQLQRLSKSLKWVGYLSTTGVYGDRGGDWVDEESPLEPTTARGERRLEAERNWLRLHKEFGVPVHLFRLAGIYGPGRNTLLTVRDGSAKRVIKPGQIFSRVHVEDIAGVIAASIAKPNPGRAYNLCDDEPCPPQEVVAYAANLLGLPLPPEIPFEEAGLSPMSKSFYADSKRVSNKRIKTELGYKLIYPNYRDGLRAL 849
            ++H LCFG G+SAR LA RL +Q W+I+ T+R    V+ +  +GF G+ FD + +I        DVTH+L+S PP   GDPV       +  L+  LKWVGYLSTTGVYGDR G WVDE + L P T RG RR+ AE +W  LH   G+P+H+FRLAGIYGPG N L+++ +G ++RV+KPGQ+FSR+HV+DIA ++ ASI KPNPGR YN+CDDE  PPQEVVA+AA LL +P PPE+ F+EA +SPM +SFYA+SKRV+N RIK ELG +L YP YR+GL AL
Sbjct:    1 MSHLLCFGLGYSARRLAGRLLRQGWRITGTARSDAAVSRLVTEGFDGVIFDGSAKIDGFASLTSDVTHILLSVPPGADGDPVFARHGQDIGALAPQLKWVGYLSTTGVYGDRQGGWVDESAELLPATERGRRRVWAEADWQGLHAAKGLPLHIFRLAGIYGPGSNQLVSLLNGKSRRVVKPGQVFSRIHVDDIASILQASIRKPNPGRVYNVCDDEAAPPQEVVAHAAALLNMPAPPEVDFDEAEMSPMGRSFYAESKRVTNDRIKQELGVELAYPTYREGLSAL 285          
BLAST of mRNA_P-wetherbeei_contig19369.1.1 vs. uniprot
Match: A0A7S8HBK5_9HYPH (SDR family oxidoreductase n=1 Tax=Kaustia mangrovi TaxID=2593653 RepID=A0A7S8HBK5_9HYPH)

HSP 1 Score: 332 bits (852), Expect = 1.970e-111
Identity = 167/286 (58.39%), Postives = 201/286 (70.28%), Query Frame = 1
Query:   13 VNHFLCFGFGFSARTLAVRLDKQVWKISATSRDAEGVAEIEAQGFHGLPFDSTLRIAPDV-------THLLISAPPDEHGDPVLRLFQAQLQRLSKSLKWVGYLSTTGVYGDRGGDWVDEESPLEPTTARGERRLEAERNWLRLHKEFGVPVHLFRLAGIYGPGRNTLLTVRDGSAKRVIKPGQIFSRVHVEDIAGVIAASIAKPNPGRAYNLCDDEPCPPQEVVAYAANLLGLPLPPEIPFEEAGLSPMSKSFYADSKRVSNKRIKTELGYKLIYPNYRDGLRAL 849
            ++H  CFG GFSA+ LA  L    W ++ T R  E    + A G   +P D+       V       TH+L+S PPD  G PV RLF   +   +  L+W+GYLSTTGVYG+R G WVDE S L P TARG RRL AE +WL LH   GVPVH+FRLAGIYGPGRN L  V  G A+R++KPGQ+FSR+HV+DIAGV+AASIA+P PG AYN+CDDE CPPQ+V+A+AA LLG+  PPEIPFEEAGLS M+ SFYAD+KRV+N RIK ELGY L YP YR+GL AL
Sbjct:    1 MSHLFCFGAGFSAQALARTLLASGWTVTGTCRTPEAAHPLAAAGIAPVPLDTANPDGTAVAGALATATHILVSVPPDGEGCPVARLFGEAIAERAGELRWLGYLSTTGVYGNRDGGWVDERSALTPDTARGHRRLAAENDWLALHGTRGVPVHIFRLAGIYGPGRNALEQVASGRARRIVKPGQVFSRIHVDDIAGVLAASIARPAPGTAYNVCDDEACPPQDVIAHAARLLGVEPPPEIPFEEAGLSAMAASFYADNKRVANARIKRELGYSLSYPTYREGLGAL 286          
BLAST of mRNA_P-wetherbeei_contig19369.1.1 vs. uniprot
Match: A0A3B8XT80_9HYPH (NAD(P)-dependent oxidoreductase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A3B8XT80_9HYPH)

HSP 1 Score: 328 bits (842), Expect = 6.500e-110
Identity = 165/282 (58.51%), Postives = 201/282 (71.28%), Query Frame = 1
Query:   28 CFGFGFSARTLAVRLDKQVWKISATSRDAEGVAEIEAQGFHGLPFDSTLRIAPDV------THLLISAPPDEHGDPVLRLFQAQLQRLSKSLKWVGYLSTTGVYGDRGGDWVDEESPLEPTTARGERRLEAERNWLRLHKEFGVPVHLFRLAGIYGPGRNTLLTVRDGSAKRVIKPGQIFSRVHVEDIAGVIAASIAKPNPGRAYNLCDDEPCPPQEVVAYAANLLGLPLPPEIPFEEAGLSPMSKSFYADSKRVSNKRIKTELGYKLIYPNYRDGLRALKA 855
            CFG G+SAR LA RL  Q ++++ T R AEG A + A+G     F +   +A         THLLIS PP E GDPVL   +  ++  +  ++W GYLSTTGVYGDR G+WV EE+PL+P  AR +RR  AER W  L  E G+P+H+FRLAGIYGPGRN L  V DG+AKR++K GQIFSR+HVEDIA V+ AS+AKPNPG  YN+CDDEP P  EVVAYAA LLG P PPEIPFEEA LSPM++SFY  S+RVSN R+  ELG +L YP YR+GL+AL A
Sbjct:    9 CFGCGYSARVLAARLKAQGFEVAGTCRTAEGAARLRAEGIEPFIFGNDHPLADPAAALSGTTHLLISTPPTEAGDPVLAAHREAVKAAAPEIRWAGYLSTTGVYGDRQGEWVSEETPLDPNVARSDRRASAEREWQELAGESGLPLHIFRLAGIYGPGRNQLKGVMDGTAKRIVKEGQIFSRIHVEDIANVLEASMAKPNPGAIYNVCDDEPAPAPEVVAYAAELLGRPPPPEIPFEEADLSPMARSFYMASRRVSNARMHEELGVELSYPTYREGLKALLA 290          
BLAST of mRNA_P-wetherbeei_contig19369.1.1 vs. uniprot
Match: UPI001BC480B8 (SDR family oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=UPI001BC480B8)

HSP 1 Score: 328 bits (840), Expect = 1.140e-109
Identity = 166/285 (58.25%), Postives = 203/285 (71.23%), Query Frame = 1
Query:   16 NHFLCFGFGFSARTLAVRLDKQVWKISATSRDAEGVAEIEAQGFHGLPFD-----STLRIAPDVTHLLISAPPDEHGDPVLRLFQAQLQRLSKSLKWVGYLSTTGVYGDRGGDWVDEESPLEPTTARGERRLEAERNWLRLHKEFGVPVHLFRLAGIYGPGRNTLLTVRDGSAKRVIKPGQIFSRVHVEDIAGVIAASIAKPNPGRAYNLCDDEPCPPQEVVAYAANLLGLPLPPEIPFEEAGLSPMSKSFYADSKRVSNKRIKTELGYKLIYPNYRDGLRALKA 855
             +  CFG GFSA+ LA +L  Q W +  TSR  E  A I A G+    FD     S   +    THLLIS P D+  D VLR   A + +L  +LKW+GYLSTTGVYGD GG+WVDE +P+ P  AR +RR +AE  WLRL  E GVPVH+FRLAGIYGPGRN L  V+ G+A R++KPGQ+F R+HVEDIA V+ AS+A+PNPG  YNL DDEP PPQ+VVAYAA LL LP+PPE+PF +A LSPM+ SFYAD++RV N RIKTELG  L YP YR+GL+AL++
Sbjct:    3 GNLFCFGLGFSAKVLAAQLHAQGWGVIGTSRSLEKAANIAALGYDSHVFDGLTPLSDASVLLPATHLLISVPADDDADAVLRWHGADIAKLP-NLKWLGYLSTTGVYGDTGGNWVDETTPVNPHQARSKRRTDAEAAWLRLQAEHGVPVHVFRLAGIYGPGRNQLEGVKRGTAHRIVKPGQVFCRIHVEDIAQVLRASMARPNPGAIYNLADDEPAPPQDVVAYAAELLNLPVPPEVPFAQAQLSPMAASFYADNRRVRNDRIKTELGVTLKYPTYREGLKALQS 286          
BLAST of mRNA_P-wetherbeei_contig19369.1.1 vs. uniprot
Match: A0A2E7PL28_9PROT (NAD(P)-dependent oxidoreductase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PL28_9PROT)

HSP 1 Score: 325 bits (834), Expect = 1.030e-108
Identity = 168/289 (58.13%), Postives = 204/289 (70.59%), Query Frame = 1
Query:   10 TVNHFLCFGFGFSARTLAVRLDKQVWKISATSRDAEGVAEIEAQGFHGLPFDSTLRIAPDV-------THLLISAPPDEHGDPVLRLFQAQLQRLSKSLKWVGYLSTTGVYGDRGGDWVDEESPLEPTTARGERRLEAERNWLRLHKEFGVPVHLFRLAGIYGPGRNTLLTVRDGSAKRVIKPGQIFSRVHVEDIAGVIAASIAKPNPGRAYNLCDDEPCPPQEVVAYAANLLGLPLPPEIPFEEAGLSPMSKSFYADSKRVSNKRIKTELGYKLIYPNYRDGLRALKA 855
            T    + FG G+SAR L  RL    WKI AT+RDA+ VA + A+G     FD T  +A DV       +H+L+SAPP   GDPVL      +   +  ++WVGYLSTTGVYGDR G WVDE S L P T RG RR++AE +W RL ++ G+PVHLFRLAGIYGPGRN L TVR   ++RVI+ GQ+FSR+HV DIA V+AAS+A+PNPG AYNLCDD+P PPQ+VV +A  LLG+  PPEIPFEEA +S M +SFYA+SKRVSN RIK ELG  L YP+YR GL AL A
Sbjct:    2 TSRTLIVFGLGYSARALVDRLRPDGWKIRATARDADKVAALCAEGIDAQRFDGTAPVA-DVAALLDGASHILLSAPPGADGDPVLNWHGGDIAARAPHMEWVGYLSTTGVYGDRAGGWVDESSELTPATERGLRRVDAETSWCRLRRDSGLPVHLFRLAGIYGPGRNALETVRSRRSRRVIRDGQVFSRIHVADIAAVLAASMARPNPGAAYNLCDDDPAPPQDVVTHACELLGVAPPPEIPFEEAEMSEMGRSFYAESKRVSNARIKEELGVTLAYPDYRAGLAALLA 289          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19369.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A847ZYC4_9HYPH8.070e-12662.01SDR family oxidoreductase n=1 Tax=Phyllobacteriace... [more]
A0A7Y2BSC4_9HYPH5.910e-11559.36SDR family oxidoreductase n=1 Tax=Hyphomicrobiales... [more]
UPI0019089C031.210e-11361.73SDR family oxidoreductase n=1 Tax=Aestuariivirga s... [more]
A0A2W2AVU7_9HYPH1.890e-11360.07SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]
A0A6G6WTR6_9HYPH4.900e-11360.64SDR family oxidoreductase n=1 Tax=Nordella sp. HKS... [more]
A0A848YD38_9HYPH9.470e-11256.49SDR family oxidoreductase n=1 Tax=Hyphomicrobiales... [more]
A0A7S8HBK5_9HYPH1.970e-11158.39SDR family oxidoreductase n=1 Tax=Kaustia mangrovi... [more]
A0A3B8XT80_9HYPH6.500e-11058.51NAD(P)-dependent oxidoreductase n=2 Tax=Hyphomicro... [more]
UPI001BC480B81.140e-10958.25SDR family oxidoreductase n=1 Tax=Alphaproteobacte... [more]
A0A2E7PL28_9PROT1.030e-10858.13NAD(P)-dependent oxidoreductase n=1 Tax=Rhodospiri... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19369contigP-wetherbeei_contig19369:99..956 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1333998.M2A_1859
PFAMsEpimerase
Model size858
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue7.89e-108
EggNOG OGsCOG0451@1|root,COG0451@2|Bacteria,1MWVJ@1224|Proteobacteria,2TRDY@28211|Alphaproteobacteria,4BPBN@82117|unclassified Alphaproteobacteria
DescriptionCOG0451 Nucleoside-diphosphate-sugar epimerases
Cds size858
COG categoryGM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186170.4326422-CDS-P-wetherbeei_contig19369:98..9561683186170.4326422-CDS-P-wetherbeei_contig19369:98..956Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19369 99..956 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19369.1.1prot_P-wetherbeei_contig19369.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19369 99..956 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19369.1.1

>prot_P-wetherbeei_contig19369.1.1 ID=prot_P-wetherbeei_contig19369.1.1|Name=mRNA_P-wetherbeei_contig19369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=286bp
MEFTVNHFLCFGFGFSARTLAVRLDKQVWKISATSRDAEGVAEIEAQGFH
GLPFDSTLRIAPDVTHLLISAPPDEHGDPVLRLFQAQLQRLSKSLKWVGY
LSTTGVYGDRGGDWVDEESPLEPTTARGERRLEAERNWLRLHKEFGVPVH
LFRLAGIYGPGRNTLLTVRDGSAKRVIKPGQIFSRVHVEDIAGVIAASIA
KPNPGRAYNLCDDEPCPPQEVVAYAANLLGLPLPPEIPFEEAGLSPMSKS
FYADSKRVSNKRIKTELGYKLIYPNYRDGLRALKA*
back to top

mRNA from alignment at P-wetherbeei_contig19369:99..956-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19369.1.1 ID=mRNA_P-wetherbeei_contig19369.1.1|Name=mRNA_P-wetherbeei_contig19369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig19369:99..956- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGTTCACCGTGAACCATTTCCTATGTTTCGGCTTCGGCTTTTCGGC GCGGACTCTTGCGGTGCGATTGGACAAGCAGGTGTGGAAAATTTCCGCGA CGAGCCGTGATGCGGAGGGCGTTGCCGAGATCGAGGCACAGGGATTTCAC GGATTGCCGTTTGATAGTACTTTGCGGATTGCACCGGATGTCACGCATCT TTTGATTTCTGCGCCACCCGATGAACATGGCGATCCCGTCCTGCGCTTGT TTCAGGCGCAATTGCAGAGGCTTTCAAAAAGCTTGAAGTGGGTGGGCTAT CTCTCAACCACGGGGGTTTATGGCGACCGGGGCGGTGACTGGGTTGATGA GGAGAGCCCGCTGGAGCCCACGACGGCGCGGGGCGAGAGGCGTTTGGAGG CGGAGCGAAACTGGCTCAGGCTCCACAAAGAATTTGGAGTTCCCGTGCAT TTATTTCGCCTGGCAGGGATTTATGGGCCGGGGCGGAACACGCTTCTCAC TGTCCGGGATGGCAGCGCCAAACGCGTCATCAAGCCGGGGCAGATATTCA GCCGCGTTCATGTTGAGGACATCGCGGGGGTGATTGCGGCCTCCATCGCA AAGCCAAATCCGGGCCGCGCCTATAATTTGTGTGACGACGAGCCCTGCCC GCCGCAGGAAGTGGTGGCGTATGCGGCGAACCTGCTGGGCCTGCCACTGC CGCCAGAAATTCCATTTGAGGAGGCAGGGCTTTCACCCATGTCTAAAAGT TTTTATGCGGACTCGAAACGGGTTTCCAACAAACGCATCAAGACTGAGCT GGGCTACAAGCTGATCTATCCGAATTATCGCGACGGCTTGCGCGCGCTCA AGGCGTAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig19369:99..956-

>mRNA_P-wetherbeei_contig19369.1.1 ID=mRNA_P-wetherbeei_contig19369.1.1|Name=mRNA_P-wetherbeei_contig19369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig19369:99..956- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGTTCACCGTGAACCATTTCCTATGTTTCGGCTTCGGCTTTTCGGC
GCGGACTCTTGCGGTGCGATTGGACAAGCAGGTGTGGAAAATTTCCGCGA
CGAGCCGTGATGCGGAGGGCGTTGCCGAGATCGAGGCACAGGGATTTCAC
GGATTGCCGTTTGATAGTACTTTGCGGATTGCACCGGATGTCACGCATCT
TTTGATTTCTGCGCCACCCGATGAACATGGCGATCCCGTCCTGCGCTTGT
TTCAGGCGCAATTGCAGAGGCTTTCAAAAAGCTTGAAGTGGGTGGGCTAT
CTCTCAACCACGGGGGTTTATGGCGACCGGGGCGGTGACTGGGTTGATGA
GGAGAGCCCGCTGGAGCCCACGACGGCGCGGGGCGAGAGGCGTTTGGAGG
CGGAGCGAAACTGGCTCAGGCTCCACAAAGAATTTGGAGTTCCCGTGCAT
TTATTTCGCCTGGCAGGGATTTATGGGCCGGGGCGGAACACGCTTCTCAC
TGTCCGGGATGGCAGCGCCAAACGCGTCATCAAGCCGGGGCAGATATTCA
GCCGCGTTCATGTTGAGGACATCGCGGGGGTGATTGCGGCCTCCATCGCA
AAGCCAAATCCGGGCCGCGCCTATAATTTGTGTGACGACGAGCCCTGCCC
GCCGCAGGAAGTGGTGGCGTATGCGGCGAACCTGCTGGGCCTGCCACTGC
CGCCAGAAATTCCATTTGAGGAGGCAGGGCTTTCACCCATGTCTAAAAGT
TTTTATGCGGACTCGAAACGGGTTTCCAACAAACGCATCAAGACTGAGCT
GGGCTACAAGCTGATCTATCCGAATTATCGCGACGGCTTGCGCGCGCTCA
AGGCGTAA
back to top